RNA–Protein interactions for RNA: ENST00000255641.12

CSNK1G2-201, Transcript of casein kinase 1 gamma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1G2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G2-201ENST00000255641 HSF2BPO75031 334 aa23.56■■□□□ 1.36
CSNK1G2-201ENST00000255641 ZNF34Q8IZ26 560 aa23.56■■□□□ 1.36
CSNK1G2-201ENST00000255641 KIAA0895Q8NCT3 520 aa23.56■■□□□ 1.36
CSNK1G2-201ENST00000255641 GOLPH3Q9H4A6 298 aa23.56■■□□□ 1.36
CSNK1G2-201ENST00000255641 USP17L8P0C7I0 530 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 TECP42680 631 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 MCTP2Q6DN12 878 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 RCSD1Q6JBY9 416 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 TRIM58Q8NG06 486 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 TLR10Q9BXR5 811 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 KBTBD4Q9NVX7 518 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 PCDHA6Q9UN73 950 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 PCDHA8Q9Y5H6 950 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 PLCH1Q4KWH8 1693 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 USP17L3A6NCW0 530 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 USP17L4A6NCW7 530 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 ZNF233A6NK53 670 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 CCNE1P24864 410 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 HPDP32754 393 aaPredicted RBP23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 MAGEA1P43355 309 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 USP17L1Q7RTZ2 530 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 SLC51AQ86UW1 340 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 CCDC170Q8IYT3 715 aa23.55■■□□□ 1.36
CSNK1G2-201ENST00000255641 DDAH1O94760 285 aa23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 TDRD12Q587J7 1177 aaKnown RBP23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 RNF187Q5TA31 235 aaPredicted RBP23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 CABP7Q86V35 215 aa23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 TRIM9Q9C026 710 aa23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 TFCP2L1Q9NZI6 479 aa23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 H0YHG0 523 aa23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 USO1O60763 962 aaKnown RBP23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 OR2W6PQ8NHA6 318 aa23.54■■□□□ 1.36
CSNK1G2-201ENST00000255641 PPP2R5BQ15173 497 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 PCDHA4Q9UN74 947 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 CALM1P0DP23 149 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 CALM2P0DP24 149 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 CALM3P0DP25 149 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 IQCEQ6IPM2 695 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 FNBP4Q8N3X1 1017 aaPredicted RBP23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 SLC44A5Q8NCS7 719 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 TANGO6Q9C0B7 1094 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 HYOU1Q9Y4L1 999 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 GOLGA8KD6RF30 607 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 HEXIM1O94992 359 aaKnown RBP23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 PRDX5P30044 214 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 TRAPPC10P48553 1259 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 EPHB4P54760 987 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 ARL6IP4Q66PJ3 421 aaKnown RBP23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 KRT12Q99456 494 aa23.53■■□□□ 1.36
CSNK1G2-201ENST00000255641 CICQ96RK0 1608 aaPredicted RBP23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 CCNT1O60563 726 aaKnown RBP23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 MTA3Q9BTC8 594 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 CYTH3O43739 400 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 KCNB1Q14721 858 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 KLHL7Q8IXQ5 586 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 VAT1LQ9HCJ6 419 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 CD248Q9HCU0 757 aa23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 DCP1AQ9NPI6 582 aaPredicted RBP23.52■■□□□ 1.36
CSNK1G2-201ENST00000255641 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 CAMTA2O94983 1202 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 TFAP4Q01664 338 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 KLHDC7AQ5VTJ3 777 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 FLT1P17948 1338 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 OPA1O60313 960 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 HDLBPQ00341 1268 aaKnown RBP23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 GJA10Q969M2 543 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 NDST4Q9H3R1 872 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 PLAGL2Q9UPG8 496 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.51■■□□□ 1.355e-6■■■■□ 19.6
CSNK1G2-201ENST00000255641 NUP98P52948 1817 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 BCORQ6W2J9 1755 aa23.51■■□□□ 1.35
CSNK1G2-201ENST00000255641 MYH3P11055 1940 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 MECOMQ03112 1051 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 CFAP58Q5T655 872 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 OTUD6BQ8N6M0 293 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 NUP58Q9BVL2 599 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 IL17RBQ9NRM6 502 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 SIK3Q9Y2K2 1263 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 THRAP3Q9Y2W1 955 aaKnown RBP23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 PAFAH1B1P43034 410 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 DHX37Q8IY37 1157 aaKnown RBP23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 PNMA1Q8ND90 353 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 DHTKD1Q96HY7 919 aaPredicted RBP23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 NCAPGQ9BPX3 1015 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 JPH2Q9BR39 696 aaPredicted RBP23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 PACSIN1Q9BY11 444 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 MCM9Q9NXL9 1143 aa23.5■■□□□ 1.35
CSNK1G2-201ENST00000255641 LSP1P33241 339 aa23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 CCDC152Q4G0S7 254 aa23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 DDX42Q86XP3 938 aaKnown RBP eCLIP23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 CDCA7Q9BWT1 371 aaPredicted RBP23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 PPANQ9NQ55 473 aaKnown RBP23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 MAATS1Q7Z4T9 603 aa23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 SUGP1Q8IWZ8 645 aaKnown RBP23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 CASKIN2Q8WXE0 1202 aa23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 PIK3R5Q8WYR1 880 aa23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 PYM1Q9BRP8 204 aaKnown RBP23.49■■□□□ 1.35
CSNK1G2-201ENST00000255641 ERVV-1B6SEH8 477 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms