RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeastyeast

Gene snR19, Length 568 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR19snR19 ELP4Q02884 456 aaKnown RBP8.15□□□□□ -1.1
snR19snR19 DMA2P53924 522 aa8.14□□□□□ -1.11
snR19snR19 NIS1P53939 407 aa8.14□□□□□ -1.11
snR19snR19 CSN12P47130 423 aa8.11□□□□□ -1.11
snR19snR19 BNI4P53858 892 aa8.11□□□□□ -1.11
snR19snR19 PDR1P12383 1068 aa8.1□□□□□ -1.11
snR19snR19 SPT23P35210 1082 aa8.1□□□□□ -1.11
snR19snR19 PRE3P38624 215 aa8.1□□□□□ -1.11
snR19snR19 FPK1P53739 893 aa8.1□□□□□ -1.11
snR19snR19 SIT4P20604 311 aa8.09□□□□□ -1.11
snR19snR19 YMR196WQ04336 1088 aa8.09□□□□□ -1.11
snR19snR19 NUD1P32336 851 aa8.08□□□□□ -1.12
snR19snR19 HPC2Q01448 625 aa8.08□□□□□ -1.12
snR19snR19 SSA2P10592 639 aaKnown RBP8.07□□□□□ -1.12
snR19snR19 HST2P53686 357 aa8.07□□□□□ -1.12
snR19snR19 TAF7Q05021 590 aa8.07□□□□□ -1.12
snR19snR19 CHL1P22516 861 aaPredicted RBP8.06□□□□□ -1.12
snR19snR19 KTR1P27810 393 aaKnown RBP8.06□□□□□ -1.12
snR19snR19 TYW1Q08960 810 aaKnown RBP8.06□□□□□ -1.12
snR19snR19 RAM1P22007 431 aa8.05□□□□□ -1.12
snR19snR19 GLN1P32288 370 aaKnown RBP8.05□□□□□ -1.12
snR19snR19 PTC2P39966 464 aaKnown RBP8.05□□□□□ -1.12
snR19snR19 YCF1P39109 1515 aaKnown RBP8.04□□□□□ -1.12
snR19snR19 SCJ1P25303 377 aa8.03□□□□□ -1.12
snR19snR19 NPL4P33755 580 aa8.03□□□□□ -1.12
snR19snR19 STR2P47164 639 aa8.03□□□□□ -1.12
snR19snR19 HGH1P48362 394 aaKnown RBP8.03□□□□□ -1.12
snR19snR19 MMP1Q12372 583 aa8.03□□□□□ -1.12
snR19snR19 ISM1P48526 1002 aa8.02□□□□□ -1.13
snR19snR19 RTF1P53064 558 aa8.02□□□□□ -1.13
snR19snR19 YML082WQ04533 649 aaKnown RBP8.02□□□□□ -1.13
snR19snR19 KEX2P13134 814 aa8.01□□□□□ -1.13
snR19snR19 YNL115CP53925 644 aa8.01□□□□□ -1.13
snR19snR19 TFB3Q03290 321 aa8.01□□□□□ -1.13
snR19snR19 ESS1P22696 170 aa8□□□□□ -1.13
snR19snR19 YPR015CQ12531 247 aa8□□□□□ -1.13
snR19snR19 BRL1P38770 471 aa7.99□□□□□ -1.13
snR19snR19 ERF2Q06551 359 aa7.99□□□□□ -1.13
snR19snR19 SLY41P22215 453 aa7.98□□□□□ -1.13
snR19snR19 PKH3Q03306 898 aaPredicted RBP7.97□□□□□ -1.13
snR19snR19 BUD20Q08004 166 aaPredicted RBP7.97□□□□□ -1.13
snR19snR19 SKI3P17883 1432 aaKnown RBP7.96□□□□□ -1.13
snR19snR19 TAF2P23255 1407 aa7.96□□□□□ -1.13
snR19snR19 TY1A-DR4O74302 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-HP0C2I4 478 aaKnown RBP7.95□□□□□ -1.14
snR19snR19 TY1A-AP0CX57 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-PR1P0CX58 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-ORP0CX59 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-PR2P0CX60 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-DR5P0CX65 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-ER2P0CX66 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-GR3P0CX67 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-LR1P0CX68 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-MR2P0CX69 440 aa7.95□□□□□ -1.14
snR19snR19 YJU3P28321 313 aa7.95□□□□□ -1.14
snR19snR19 GCD11P32481 527 aaKnown RBP7.95□□□□□ -1.14
snR19snR19 TY1A-JR2P47099 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-DR1Q03856 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-ML1Q04706 440 aaKnown RBP7.95□□□□□ -1.14
snR19snR19 TY1A-BRQ12217 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-NL2Q12470 440 aa7.95□□□□□ -1.14
snR19snR19 TY1A-GR2Q12485 440 aa7.95□□□□□ -1.14
snR19snR19 SEC2P17065 759 aa7.94□□□□□ -1.14
snR19snR19 PKC1P24583 1151 aa7.93□□□□□ -1.14
snR19snR19 RAD59Q12223 238 aa7.93□□□□□ -1.14
snR19snR19 SSK2P53599 1579 aa7.92□□□□□ -1.14
snR19snR19 PRT1P06103 763 aaKnown RBP7.91□□□□□ -1.14
snR19snR19 ARG8P18544 423 aa7.9□□□□□ -1.14
snR19snR19 RSC30P38781 883 aa7.9□□□□□ -1.14
snR19snR19 LAM6Q08001 693 aa7.9□□□□□ -1.14
snR19snR19 BUB1P41695 1021 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
snR19snR19 PUS6P53294 404 aa7.89□□□□□ -1.15
snR19snR19 AGE1Q04412 482 aa7.89□□□□□ -1.15
snR19snR19 TRM1P15565 570 aaKnown RBP7.88□□□□□ -1.15
snR19snR19 TUB4P53378 473 aa7.88□□□□□ -1.15
snR19snR19 VRP1P37370 817 aa7.87□□□□□ -1.15
snR19snR19 YBL036CP38197 257 aa7.86□□□□□ -1.15
snR19snR19 GYP1Q08484 637 aa7.86□□□□□ -1.15
snR19snR19 TBF1Q02457 562 aa7.85□□□□□ -1.15
snR19snR19 SAS4Q04003 481 aa7.85□□□□□ -1.15
snR19snR19 CSE4P36012 229 aa7.84□□□□□ -1.15
snR19snR19 RRN7P40992 514 aa7.84□□□□□ -1.15
snR19snR19 MYO2P19524 1574 aaKnown RBP7.84□□□□□ -1.15
snR19snR19 BNI1P41832 1953 aa7.83□□□□□ -1.16
snR19snR19 PAT1P25644 796 aaKnown RBP7.83□□□□□ -1.16
snR19snR19 BCK2P33306 851 aa7.83□□□□□ -1.16
snR19snR19 YJL007CP47080 104 aa7.83□□□□□ -1.16
snR19snR19 ESC1Q03661 1658 aaKnown RBP7.83□□□□□ -1.16
snR19snR19 UFD4P33202 1483 aa7.82□□□□□ -1.16
snR19snR19 DNF1P32660 1571 aa7.82□□□□□ -1.16
snR19snR19 PAC1P39946 494 aaKnown RBP7.82□□□□□ -1.16
snR19snR19 SPT16P32558 1035 aaKnown RBP7.81□□□□□ -1.16
snR19snR19 YDL206WQ12424 762 aa7.81□□□□□ -1.16
snR19snR19 RLF2Q12495 606 aa7.81□□□□□ -1.16
snR19snR19 CDC25P04821 1589 aa7.8□□□□□ -1.16
snR19snR19 SIN3P22579 1536 aa7.8□□□□□ -1.16
snR19snR19 BIM1P40013 344 aa7.8□□□□□ -1.16
snR19snR19 MAK16P10962 306 aaPredicted RBP7.79□□□□□ -1.16
snR19snR19 RPA14P50106 137 aa7.79□□□□□ -1.16
snR19snR19 ESP1Q03018 1630 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms