RNA–Protein interactions for RNA: YPR182W

SMX3, Transcript of Core Sm protein Sm F, yeastyeast

Gene SMX3, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMX3YPR182W MLP1Q02455 1875 aaKnown RBP9.05□□□□□ -0.96
SMX3YPR182W PSK1P31374 1356 aa9.02□□□□□ -0.97
SMX3YPR182W CHZ1P40019 153 aaPredicted RBP9.02□□□□□ -0.97
SMX3YPR182W SEC3P33332 1336 aaKnown RBP9.02□□□□□ -0.97
SMX3YPR182W CPS1P27614 576 aa9.01□□□□□ -0.97
SMX3YPR182W RCM1P53972 490 aa9.01□□□□□ -0.97
SMX3YPR182W PDS5Q04264 1277 aa9□□□□□ -0.97
SMX3YPR182W PPH3P32345 308 aa8.98□□□□□ -0.97
SMX3YPR182W FKH1P40466 484 aa8.97□□□□□ -0.97
SMX3YPR182W YML133CQ03099 1374 aa8.95□□□□□ -0.98
SMX3YPR182W YLL067CQ07888 1374 aa8.95□□□□□ -0.98
SMX3YPR182W YLL066CQ99208 1374 aa8.95□□□□□ -0.98
SMX3YPR182W RTG3P38165 486 aa8.93□□□□□ -0.98
SMX3YPR182W ADE6P38972 1358 aaKnown RBP8.93□□□□□ -0.98
SMX3YPR182W SPT7P35177 1332 aa8.92□□□□□ -0.98
SMX3YPR182W LEU2P04173 364 aaPredicted RBP8.92□□□□□ -0.98
SMX3YPR182W TY4B-HP0C2J7 1802 aa8.91□□□□□ -0.98
SMX3YPR182W TY4B-JP47024 1803 aa8.91□□□□□ -0.98
SMX3YPR182W MTR4P47047 1073 aaKnown RBP8.91□□□□□ -0.98
SMX3YPR182W PSD2P53037 1138 aaKnown RBP8.9□□□□□ -0.98
SMX3YPR182W PTP3P40048 928 aa8.89□□□□□ -0.99
SMX3YPR182W PRP43P53131 767 aaKnown RBP8.89□□□□□ -0.99
SMX3YPR182W RRP5Q05022 1729 aaKnown RBP8.85□□□□□ -0.99
SMX3YPR182W PDI1P17967 522 aaKnown RBP8.85□□□□□ -0.99
SMX3YPR182W TAP42Q04372 366 aa8.85□□□□□ -0.99
SMX3YPR182W ENP1P38333 483 aaKnown RBP8.84□□□□□ -0.99
SMX3YPR182W NST1P53935 1240 aa8.84□□□□□ -0.99
SMX3YPR182W CSE4P36012 229 aa8.83□□□□□ -1
SMX3YPR182W RPS24AP0CX31 135 aaKnown RBP8.82□□□□□ -1
SMX3YPR182W RPS24BP0CX32 135 aaKnown RBP8.82□□□□□ -1
SMX3YPR182W GRX4P32642 244 aa8.82□□□□□ -1
SMX3YPR182W RTF1P53064 558 aa8.82□□□□□ -1
SMX3YPR182W YEF3P16521 1044 aaKnown RBP8.81□□□□□ -1
SMX3YPR182W IOC4Q04213 475 aa8.81□□□□□ -1
SMX3YPR182W LEU3P08638 886 aa8.8□□□□□ -1
SMX3YPR182W YIL177CP40434 1758 aa8.79□□□□□ -1
SMX3YPR182W YJL225CP40889 1758 aa8.79□□□□□ -1
SMX3YPR182W AUS1Q08409 1394 aa8.79□□□□□ -1
SMX3YPR182W PRP5P21372 849 aaPredicted RBP8.78□□□□□ -1
SMX3YPR182W PRP45P28004 379 aaPredicted RBP8.78□□□□□ -1
SMX3YPR182W YAH1Q12184 172 aaKnown RBP8.78□□□□□ -1
SMX3YPR182W YRF1-2P40105 1681 aa8.78□□□□□ -1
SMX3YPR182W TRK1P12685 1235 aa8.77□□□□□ -1.01
SMX3YPR182W KAR2P16474 682 aaKnown RBP8.77□□□□□ -1.01
SMX3YPR182W HIM1Q06674 414 aa8.75□□□□□ -1.01
SMX3YPR182W FKS3Q04952 1785 aa8.75□□□□□ -1.01
SMX3YPR182W DPS1P04802 557 aaKnown RBP8.74□□□□□ -1.01
SMX3YPR182W REB1P21538 810 aa8.74□□□□□ -1.01
SMX3YPR182W NSR1P27476 414 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
SMX3YPR182W GAS4Q08271 471 aa8.74□□□□□ -1.01
SMX3YPR182W SLM3Q12093 417 aa8.74□□□□□ -1.01
SMX3YPR182W URB1P34241 1764 aaKnown RBP8.73□□□□□ -1.01
SMX3YPR182W MSB3P48566 633 aaPredicted RBP8.73□□□□□ -1.01
SMX3YPR182W ENT1Q12518 454 aa8.73□□□□□ -1.01
SMX3YPR182W SNF2P22082 1703 aa8.72□□□□□ -1.01
SMX3YPR182W APC1P53886 1748 aa8.72□□□□□ -1.01
SMX3YPR182W RPO41P13433 1351 aaKnown RBP8.72□□□□□ -1.01
SMX3YPR182W APP1P53933 587 aa8.7□□□□□ -1.02
SMX3YPR182W TCB1Q12466 1186 aa8.7□□□□□ -1.02
SMX3YPR182W RRP46P53256 223 aaPredicted RBP8.69□□□□□ -1.02
SMX3YPR182W ENV9Q08651 330 aa8.69□□□□□ -1.02
SMX3YPR182W YRF1-3P0CX14 1859 aa8.68□□□□□ -1.02
SMX3YPR182W YRF1-7P0CX15 1859 aa8.68□□□□□ -1.02
SMX3YPR182W YRF1-6P53819 1859 aa8.68□□□□□ -1.02
SMX3YPR182W PAP2P53632 584 aaKnown RBP8.68□□□□□ -1.02
SMX3YPR182W RSF2P46974 1380 aa8.68□□□□□ -1.02
SMX3YPR182W RPP0P05317 312 aaKnown RBP8.67□□□□□ -1.02
SMX3YPR182W PRS1P32895 427 aaKnown RBP8.65□□□□□ -1.02
SMX3YPR182W RTR1P40084 226 aaPredicted RBP8.65□□□□□ -1.02
SMX3YPR182W XKS1P42826 600 aa8.65□□□□□ -1.02
SMX3YPR182W SIR4P11978 1358 aa8.63□□□□□ -1.03
SMX3YPR182W AKL1P38080 1108 aaKnown RBP8.63□□□□□ -1.03
SMX3YPR182W IES2P40154 320 aa8.63□□□□□ -1.03
SMX3YPR182W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
SMX3YPR182W IMH1Q06704 911 aaKnown RBP8.63□□□□□ -1.03
SMX3YPR182W YDL144CQ07589 356 aa8.63□□□□□ -1.03
SMX3YPR182W YRF1-4O13559 1382 aa8.62□□□□□ -1.03
SMX3YPR182W PRD1P25375 712 aa8.62□□□□□ -1.03
SMX3YPR182W VPS27P40343 622 aaKnown RBP8.62□□□□□ -1.03
SMX3YPR182W DSD1P53095 428 aa8.62□□□□□ -1.03
SMX3YPR182W CTF4Q01454 927 aa8.61□□□□□ -1.03
SMX3YPR182W RCR1P38212 213 aa8.6□□□□□ -1.03
SMX3YPR182W YIL055CP40523 627 aaKnown RBP8.6□□□□□ -1.03
SMX3YPR182W MPP10P47083 593 aaKnown RBP8.6□□□□□ -1.03
SMX3YPR182W CDC45Q08032 650 aa8.6□□□□□ -1.03
SMX3YPR182W ROM2P51862 1356 aaKnown RBP8.59□□□□□ -1.03
SMX3YPR182W THI22Q06490 572 aa8.58□□□□□ -1.04
SMX3YPR182W HSP104P31539 908 aaKnown RBP8.57□□□□□ -1.04
SMX3YPR182W NTH2P35172 780 aa8.57□□□□□ -1.04
SMX3YPR182W MEC3Q02574 474 aa8.57□□□□□ -1.04
SMX3YPR182W YKL133CP36066 463 aa8.56□□□□□ -1.04
SMX3YPR182W YRB30P53107 440 aaPredicted RBP8.56□□□□□ -1.04
SMX3YPR182W YNL050CP53952 270 aa8.56□□□□□ -1.04
SMX3YPR182W AOS1Q06624 347 aa8.56□□□□□ -1.04
SMX3YPR182W SUI2P20459 304 aaKnown RBP8.55□□□□□ -1.04
SMX3YPR182W SAP155P43612 1002 aa8.55□□□□□ -1.04
SMX3YPR182W HEF3P53978 1044 aaKnown RBP8.54□□□□□ -1.04
SMX3YPR182W INP54Q08227 384 aaKnown RBP8.54□□□□□ -1.04
SMX3YPR182W DOT5P40553 215 aa8.53□□□□□ -1.04
SMX3YPR182W ADE16P54113 591 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms