RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W FRK1Q03002 865 aaPredicted RBP2.14□□□□□ -2.07
RDS3YPR094W YDR090CQ03193 310 aa2.14□□□□□ -2.07
RDS3YPR094W YDL176WQ12027 708 aa2.14□□□□□ -2.07
RDS3YPR094W NUD1P32336 851 aa2.13□□□□□ -2.07
RDS3YPR094W TUM1Q08686 304 aaKnown RBP2.13□□□□□ -2.07
RDS3YPR094W RPP1BP10622 106 aaKnown RBP2.12□□□□□ -2.07
RDS3YPR094W GCD11P32481 527 aaKnown RBP2.12□□□□□ -2.07
RDS3YPR094W SPT16P32558 1035 aaKnown RBP2.12□□□□□ -2.07
RDS3YPR094W SET1P38827 1080 aaKnown RBP2.12□□□□□ -2.07
RDS3YPR094W BDP1P46678 594 aa2.12□□□□□ -2.07
RDS3YPR094W PEX21P50091 288 aa2.12□□□□□ -2.07
RDS3YPR094W LCB5Q06147 687 aaKnown RBP2.11□□□□□ -2.07
RDS3YPR094W NPL4P33755 580 aa2.1□□□□□ -2.07
RDS3YPR094W RRN7P40992 514 aa2.1□□□□□ -2.07
RDS3YPR094W HED1Q03937 162 aa2.1□□□□□ -2.07
RDS3YPR094W CSC1Q06538 782 aa2.1□□□□□ -2.07
RDS3YPR094W TFB4Q12004 338 aa2.1□□□□□ -2.07
RDS3YPR094W MET32Q12041 191 aa2.09□□□□□ -2.07
RDS3YPR094W ASH1P34233 588 aa2.08□□□□□ -2.08
RDS3YPR094W ORC6P38826 435 aa2.08□□□□□ -2.08
RDS3YPR094W KIC1P38692 1080 aa2.07□□□□□ -2.08
RDS3YPR094W RRD1P40454 393 aaKnown RBP2.07□□□□□ -2.08
RDS3YPR094W ERF2Q06551 359 aa2.07□□□□□ -2.08
RDS3YPR094W AFT1P22149 690 aa2.06□□□□□ -2.08
RDS3YPR094W MVP1P40959 511 aaKnown RBP2.06□□□□□ -2.08
RDS3YPR094W PUS5Q06244 254 aa2.06□□□□□ -2.08
RDS3YPR094W MOD5P07884 428 aa2.05□□□□□ -2.08
RDS3YPR094W KEX2P13134 814 aa2.05□□□□□ -2.08
RDS3YPR094W PAT1P25644 796 aaKnown RBP2.05□□□□□ -2.08
RDS3YPR094W TRK2P28584 889 aa2.05□□□□□ -2.08
RDS3YPR094W PAC1P39946 494 aaKnown RBP2.05□□□□□ -2.08
RDS3YPR094W YJR115WP47152 169 aa2.05□□□□□ -2.08
RDS3YPR094W YPR109WQ06104 294 aa2.05□□□□□ -2.08
RDS3YPR094W RGR1P19263 1082 aa2.04□□□□□ -2.08
RDS3YPR094W HST3P53687 447 aa2.04□□□□□ -2.08
RDS3YPR094W CAF120P53836 1060 aa2.04□□□□□ -2.08
RDS3YPR094W ACO2P39533 789 aa2.03□□□□□ -2.08
RDS3YPR094W REF2P42073 533 aaPredicted RBP2.03□□□□□ -2.08
RDS3YPR094W NRD1P53617 575 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08 RIP-Chip
RDS3YPR094W AGE1Q04412 482 aa2.03□□□□□ -2.08
RDS3YPR094W IFH1P39520 1085 aa2.02□□□□□ -2.09
RDS3YPR094W LSB3P43603 459 aaKnown RBP2.01□□□□□ -2.09
RDS3YPR094W YGR035CP53222 116 aa2.01□□□□□ -2.09
RDS3YPR094W TUB4P53378 473 aa2.01□□□□□ -2.09
RDS3YPR094W COX6P00427 148 aa2□□□□□ -2.09
RDS3YPR094W ICP55P40051 511 aa2□□□□□ -2.09
RDS3YPR094W OPT2Q06593 877 aa2□□□□□ -2.09
RDS3YPR094W PUS1Q12211 544 aaKnown RBP2□□□□□ -2.09
RDS3YPR094W YPR148CQ06523 435 aa1.99□□□□□ -2.09
RDS3YPR094W YIR007WP40566 764 aa1.98□□□□□ -2.09
RDS3YPR094W PTK2P47116 818 aaKnown RBP1.98□□□□□ -2.09
RDS3YPR094W MSB3P48566 633 aaPredicted RBP1.98□□□□□ -2.09
RDS3YPR094W HPF1Q05164 967 aa1.98□□□□□ -2.09
RDS3YPR094W YPR204WQ08995 1032 aa1.97□□□□□ -2.09
RDS3YPR094W GLT1Q12680 2145 aaKnown RBP1.97□□□□□ -2.09
RDS3YPR094W UGA3P26370 528 aa1.96□□□□□ -2.1
RDS3YPR094W GLY1P37303 387 aaKnown RBP1.96□□□□□ -2.1
RDS3YPR094W VPS70P47161 811 aa1.96□□□□□ -2.1
RDS3YPR094W YLR346CQ06139 101 aa1.96□□□□□ -2.1
RDS3YPR094W MAK21Q12176 1025 aaKnown RBP1.96□□□□□ -2.1
RDS3YPR094W TY1A-BLQ12266 440 aa1.96□□□□□ -2.1
RDS3YPR094W PDC1P06169 563 aaKnown RBP1.95□□□□□ -2.1
RDS3YPR094W TPD3P31383 635 aa1.95□□□□□ -2.1
RDS3YPR094W HXT10P43581 546 aa1.95□□□□□ -2.1
RDS3YPR094W KXD1P53158 218 aa1.95□□□□□ -2.1
RDS3YPR094W YNL115CP53925 644 aa1.95□□□□□ -2.1
RDS3YPR094W SYH1Q02875 849 aaKnown RBP1.95□□□□□ -2.1
RDS3YPR094W NUP85P46673 744 aa1.94□□□□□ -2.1
RDS3YPR094W RTF1P53064 558 aa1.94□□□□□ -2.1
RDS3YPR094W SCW11P53189 542 aa1.94□□□□□ -2.1
RDS3YPR094W TYW1Q08960 810 aaKnown RBP1.94□□□□□ -2.1
RDS3YPR094W PHM7Q12252 991 aa1.94□□□□□ -2.1
RDS3YPR094W SRF1Q12516 437 aa1.94□□□□□ -2.1
RDS3YPR094W MIP1P15801 1254 aa1.93□□□□□ -2.1
RDS3YPR094W SIT4P20604 311 aa1.93□□□□□ -2.1
RDS3YPR094W PSE1P32337 1089 aaKnown RBP1.93□□□□□ -2.1
RDS3YPR094W MRT4P33201 236 aaKnown RBP1.93□□□□□ -2.1
RDS3YPR094W MDJ1P35191 511 aa1.93□□□□□ -2.1
RDS3YPR094W KIP2P28743 706 aa1.92□□□□□ -2.1
RDS3YPR094W CLB5P30283 435 aa1.91□□□□□ -2.1
RDS3YPR094W IXR1P33417 597 aa1.91□□□□□ -2.1
RDS3YPR094W NIS1P53939 407 aa1.91□□□□□ -2.1
RDS3YPR094W CCP1P00431 361 aa1.9□□□□□ -2.11
RDS3YPR094W DLD1P32891 587 aa1.9□□□□□ -2.11
RDS3YPR094W YJR098CP47139 656 aa1.9□□□□□ -2.11
RDS3YPR094W LSC2P53312 427 aa1.9□□□□□ -2.11
RDS3YPR094W TY1A-MR1Q04215 440 aa1.9□□□□□ -2.11
RDS3YPR094W TCB1Q12466 1186 aa1.9□□□□□ -2.11
RDS3YPR094W SBP1P10080 294 aaKnown RBP1.89□□□□□ -2.11
RDS3YPR094W SLY41P22215 453 aa1.89□□□□□ -2.11
RDS3YPR094W OSH7P38755 437 aa1.89□□□□□ -2.11
RDS3YPR094W AAD14P42884 376 aa1.89□□□□□ -2.11
RDS3YPR094W ROG3P43602 733 aa1.89□□□□□ -2.11
RDS3YPR094W RPA14P50106 137 aa1.89□□□□□ -2.11
RDS3YPR094W UBP2Q01476 1272 aa1.89□□□□□ -2.11
RDS3YPR094W YPR097WQ06839 1073 aa1.89□□□□□ -2.11
RDS3YPR094W YDL206WQ12424 762 aa1.89□□□□□ -2.11
RDS3YPR094W DPH6Q12429 685 aa1.89□□□□□ -2.11
RDS3YPR094W ARG82P07250 355 aa1.88□□□□□ -2.11
RDS3YPR094W PBS2P08018 668 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms