RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	SCT1	P32784	759 aa		13.13	□□□□□ -0.31
TIF6	YPR016C	PSK1	P31374	1356 aa		13.09	□□□□□ -0.31
TIF6	YPR016C	PDS5	Q04264	1277 aa		13.07	□□□□□ -0.32
TIF6	YPR016C	RTG3	P38165	486 aa		13.03	□□□□□ -0.32
TIF6	YPR016C	MLP1	Q02455	1875 aa	Known RBP	13.03	□□□□□ -0.32
TIF6	YPR016C	PTP3	P40048	928 aa		13.01	□□□□□ -0.33
TIF6	YPR016C	FKH1	P40466	484 aa		13.01	□□□□□ -0.33
TIF6	YPR016C	YML133C	Q03099	1374 aa		13.01	□□□□□ -0.33
TIF6	YPR016C	YLL067C	Q07888	1374 aa		13.01	□□□□□ -0.33
TIF6	YPR016C	YLL066C	Q99208	1374 aa		13.01	□□□□□ -0.33
TIF6	YPR016C	LEU2	P04173	364 aa	Predicted RBP	12.98	□□□□□ -0.33
TIF6	YPR016C	MTR4	P47047	1073 aa	Known RBP	12.96	□□□□□ -0.33
TIF6	YPR016C	PSD2	P53037	1138 aa	Known RBP	12.96	□□□□□ -0.33
TIF6	YPR016C	TY4B-H	P0C2J7	1802 aa		12.96	□□□□□ -0.33
TIF6	YPR016C	TY4B-J	P47024	1803 aa		12.96	□□□□□ -0.33
TIF6	YPR016C	ADE6	P38972	1358 aa	Known RBP	12.95	□□□□□ -0.34
TIF6	YPR016C	SPT7	P35177	1332 aa		12.95	□□□□□ -0.34
TIF6	YPR016C	CSE4	P36012	229 aa		12.94	□□□□□ -0.34
TIF6	YPR016C	SEC3	P33332	1336 aa	Known RBP	12.93	□□□□□ -0.34
TIF6	YPR016C	LEU3	P08638	886 aa		12.93	□□□□□ -0.34
TIF6	YPR016C	RPS24A	P0CX31	135 aa	Known RBP	12.93	□□□□□ -0.34
TIF6	YPR016C	RPS24B	P0CX32	135 aa	Known RBP	12.93	□□□□□ -0.34
TIF6	YPR016C	NST1	P53935	1240 aa		12.93	□□□□□ -0.34
TIF6	YPR016C	PRP45	P28004	379 aa	Predicted RBP	12.9	□□□□□ -0.34
TIF6	YPR016C	RRP5	Q05022	1729 aa	Known RBP	12.89	□□□□□ -0.35
TIF6	YPR016C	PRP43	P53131	767 aa	Known RBP	12.89	□□□□□ -0.35
TIF6	YPR016C	REB1	P21538	810 aa		12.87	□□□□□ -0.35
TIF6	YPR016C	APP1	P53933	587 aa		12.87	□□□□□ -0.35
TIF6	YPR016C	PRP5	P21372	849 aa	Predicted RBP	12.86	□□□□□ -0.35
TIF6	YPR016C	YAH1	Q12184	172 aa	Known RBP	12.86	□□□□□ -0.35
TIF6	YPR016C	PDI1	P17967	522 aa	Known RBP	12.85	□□□□□ -0.35
TIF6	YPR016C	ENT1	Q12518	454 aa		12.85	□□□□□ -0.35
TIF6	YPR016C	RTF1	P53064	558 aa		12.84	□□□□□ -0.35
TIF6	YPR016C	YEF3	P16521	1044 aa	Known RBP	12.82	□□□□□ -0.36
TIF6	YPR016C	GAS4	Q08271	471 aa		12.82	□□□□□ -0.36
TIF6	YPR016C	TAP42	Q04372	366 aa		12.81	□□□□□ -0.36
TIF6	YPR016C	MSB3	P48566	633 aa	Predicted RBP	12.8	□□□□□ -0.36
TIF6	YPR016C	HIM1	Q06674	414 aa		12.8	□□□□□ -0.36
TIF6	YPR016C	DPS1	P04802	557 aa	Known RBP	12.79	□□□□□ -0.36
TIF6	YPR016C	TRK1	P12685	1235 aa		12.79	□□□□□ -0.36
TIF6	YPR016C	AUS1	Q08409	1394 aa		12.79	□□□□□ -0.36
TIF6	YPR016C	KAR2	P16474	682 aa	Known RBP	12.78	□□□□□ -0.36
TIF6	YPR016C	ENV9	Q08651	330 aa		12.78	□□□□□ -0.36
TIF6	YPR016C	YRF1-2	P40105	1681 aa		12.77	□□□□□ -0.37
TIF6	YPR016C	YIL177C	P40434	1758 aa		12.76	□□□□□ -0.37
TIF6	YPR016C	YJL225C	P40889	1758 aa		12.76	□□□□□ -0.37
TIF6	YPR016C	GRX4	P32642	244 aa		12.76	□□□□□ -0.37
TIF6	YPR016C	SLM3	Q12093	417 aa		12.75	□□□□□ -0.37
TIF6	YPR016C	TCB1	Q12466	1186 aa		12.73	□□□□□ -0.37
TIF6	YPR016C	PAP2	P53632	584 aa	Known RBP	12.71	□□□□□ -0.37
TIF6	YPR016C	ENP1	P38333	483 aa	Known RBP	12.7	□□□□□ -0.38
TIF6	YPR016C	URB1	P34241	1764 aa	Known RBP	12.69	□□□□□ -0.38
TIF6	YPR016C	IMH1	Q06704	911 aa	Known RBP	12.69	□□□□□ -0.38
TIF6	YPR016C	FKS3	Q04952	1785 aa		12.69	□□□□□ -0.38
TIF6	YPR016C	XKS1	P42826	600 aa		12.68	□□□□□ -0.38
TIF6	YPR016C	YIL055C	P40523	627 aa	Known RBP	12.67	□□□□□ -0.38
TIF6	YPR016C	RSF2	P46974	1380 aa		12.66	□□□□□ -0.38
TIF6	YPR016C	IES2	P40154	320 aa		12.65	□□□□□ -0.38
TIF6	YPR016C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	12.65	□□□□□ -0.38	not detected
TIF6	YPR016C	RPO41	P13433	1351 aa	Known RBP	12.65	□□□□□ -0.38
TIF6	YPR016C	APC1	P53886	1748 aa		12.64	□□□□□ -0.39
TIF6	YPR016C	RRP46	P53256	223 aa	Predicted RBP	12.63	□□□□□ -0.39
TIF6	YPR016C	SNF2	P22082	1703 aa		12.61	□□□□□ -0.39
TIF6	YPR016C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.6	□□□□□ -0.39	not detected
TIF6	YPR016C	YRF1-3	P0CX14	1859 aa		12.59	□□□□□ -0.39
TIF6	YPR016C	YRF1-7	P0CX15	1859 aa		12.59	□□□□□ -0.39
TIF6	YPR016C	YRF1-6	P53819	1859 aa		12.59	□□□□□ -0.39
TIF6	YPR016C	RCR1	P38212	213 aa		12.59	□□□□□ -0.39
TIF6	YPR016C	RTR1	P40084	226 aa	Predicted RBP	12.59	□□□□□ -0.39
TIF6	YPR016C	DSD1	P53095	428 aa		12.57	□□□□□ -0.4
TIF6	YPR016C	IOC4	Q04213	475 aa		12.57	□□□□□ -0.4
TIF6	YPR016C	AKL1	P38080	1108 aa	Known RBP	12.56	□□□□□ -0.4
TIF6	YPR016C	YKL133C	P36066	463 aa		12.55	□□□□□ -0.4
TIF6	YPR016C	MPP10	P47083	593 aa	Known RBP	12.55	□□□□□ -0.4
TIF6	YPR016C	YDL144C	Q07589	356 aa		12.55	□□□□□ -0.4
TIF6	YPR016C	SIR4	P11978	1358 aa		12.55	□□□□□ -0.4
TIF6	YPR016C	HSP104	P31539	908 aa	Known RBP	12.53	□□□□□ -0.4
TIF6	YPR016C	DOT5	P40553	215 aa		12.53	□□□□□ -0.4
TIF6	YPR016C	GLN1	P32288	370 aa	Known RBP	12.52	□□□□□ -0.41
TIF6	YPR016C	YRF1-4	O13559	1382 aa		12.52	□□□□□ -0.41
TIF6	YPR016C	ROM2	P51862	1356 aa	Known RBP	12.52	□□□□□ -0.41
TIF6	YPR016C	PRD1	P25375	712 aa		12.51	□□□□□ -0.41
TIF6	YPR016C	ADE16	P54113	591 aa	Known RBP	12.49	□□□□□ -0.41
TIF6	YPR016C	FOX2	Q02207	900 aa	Known RBP	12.49	□□□□□ -0.41
TIF6	YPR016C	MEC3	Q02574	474 aa		12.49	□□□□□ -0.41
TIF6	YPR016C	YMR074C	Q04773	145 aa		12.49	□□□□□ -0.41
TIF6	YPR016C	FRK1	Q03002	865 aa	Predicted RBP	12.48	□□□□□ -0.41
TIF6	YPR016C	PRS1	P32895	427 aa	Known RBP	12.47	□□□□□ -0.41
TIF6	YPR016C	THI22	Q06490	572 aa		12.47	□□□□□ -0.41
TIF6	YPR016C	INP54	Q08227	384 aa	Known RBP	12.47	□□□□□ -0.41
TIF6	YPR016C	COB	P00163	385 aa		12.46	□□□□□ -0.41
TIF6	YPR016C	RPP0	P05317	312 aa	Known RBP	12.46	□□□□□ -0.41
TIF6	YPR016C	NTH2	P35172	780 aa		12.46	□□□□□ -0.41
TIF6	YPR016C	CTF4	Q01454	927 aa		12.45	□□□□□ -0.42
TIF6	YPR016C	AOS1	Q06624	347 aa		12.45	□□□□□ -0.42
TIF6	YPR016C	VPS27	P40343	622 aa	Known RBP	12.44	□□□□□ -0.42
TIF6	YPR016C	RPN11	P43588	306 aa	Known RBP	12.44	□□□□□ -0.42
TIF6	YPR016C	NUP145	P49687	1317 aa		12.43	□□□□□ -0.42
TIF6	YPR016C	TPD3	P31383	635 aa		12.43	□□□□□ -0.42
TIF6	YPR016C	SAP155	P43612	1002 aa		12.43	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms