RNA–Protein interactions for RNA: YPL043W

NOP4, Transcript of Nucleolar protein, yeast

Gene NOP4, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP4	YPL043W	IQG1	Q12280	1495 aa		4.76	□□□□□ -1.65
NOP4	YPL043W	ARO1	P08566	1588 aa	Known RBP	4.76	□□□□□ -1.65
NOP4	YPL043W	BUD3	P25558	1636 aa		4.76	□□□□□ -1.65
NOP4	YPL043W	SEC61	P32915	480 aa		4.74	□□□□□ -1.65
NOP4	YPL043W	PIB1	Q06651	286 aa		4.74	□□□□□ -1.65
NOP4	YPL043W	IKI3	Q06706	1349 aa	Known RBP	4.74	□□□□□ -1.65
NOP4	YPL043W	DOP1	Q03921	1698 aa		4.73	□□□□□ -1.65
NOP4	YPL043W	AI2	P03876	854 aa		4.73	□□□□□ -1.65
NOP4	YPL043W	MMS1	Q06211	1407 aa		4.73	□□□□□ -1.65
NOP4	YPL043W	YSP2	Q06681	1438 aa		4.73	□□□□□ -1.65
NOP4	YPL043W	TRP5	P00931	707 aa	Known RBP	4.73	□□□□□ -1.65
NOP4	YPL043W	CKB1	P43639	278 aa		4.73	□□□□□ -1.65
NOP4	YPL043W	YNL035C	P53962	389 aa	Known RBP	4.73	□□□□□ -1.65
NOP4	YPL043W	IOC4	Q04213	475 aa		4.71	□□□□□ -1.65
NOP4	YPL043W	SSM4	P40318	1319 aa		4.71	□□□□□ -1.66
NOP4	YPL043W	SEC7	P11075	2009 aa	Known RBP	4.7	□□□□□ -1.66
NOP4	YPL043W	TFG1	P41895	735 aa	Predicted RBP	4.7	□□□□□ -1.66
NOP4	YPL043W	SRB8	P25648	1427 aa		4.7	□□□□□ -1.66
NOP4	YPL043W	TRM3	Q07527	1436 aa		4.7	□□□□□ -1.66
NOP4	YPL043W	SET4	P42948	560 aa		4.69	□□□□□ -1.66
NOP4	YPL043W	RSM7	P47150	247 aa		4.69	□□□□□ -1.66
NOP4	YPL043W	YLR271W	Q06152	274 aa		4.69	□□□□□ -1.66
NOP4	YPL043W	CHC1	P22137	1653 aa	Known RBP	4.69	□□□□□ -1.66
NOP4	YPL043W	YOL036W	Q08206	761 aa		4.69	□□□□□ -1.66
NOP4	YPL043W	CHL1	P22516	861 aa	Predicted RBP	4.68	□□□□□ -1.66
NOP4	YPL043W	ORC1	P54784	914 aa	Predicted RBP	4.68	□□□□□ -1.66
NOP4	YPL043W	DNF2	Q12675	1612 aa		4.68	□□□□□ -1.66
NOP4	YPL043W	RPN1	P38764	993 aa	Known RBP	4.68	□□□□□ -1.66
NOP4	YPL043W	RLF2	Q12495	606 aa		4.68	□□□□□ -1.66
NOP4	YPL043W	BNR1	P40450	1375 aa		4.67	□□□□□ -1.66
NOP4	YPL043W	SAP30	P38429	201 aa		4.66	□□□□□ -1.66
NOP4	YPL043W	YAH1	Q12184	172 aa	Known RBP	4.65	□□□□□ -1.66
NOP4	YPL043W	BUD21	Q08492	214 aa	Predicted RBP	4.64	□□□□□ -1.67
NOP4	YPL043W	YOR093C	Q12275	1648 aa		4.63	□□□□□ -1.67
NOP4	YPL043W	PRE3	P38624	215 aa		4.63	□□□□□ -1.67
NOP4	YPL043W	CST9	Q06032	482 aa		4.63	□□□□□ -1.67
NOP4	YPL043W	RGA1	P39083	1007 aa		4.61	□□□□□ -1.67
NOP4	YPL043W	XDJ1	P39102	459 aa		4.6	□□□□□ -1.67
NOP4	YPL043W	GCN2	P15442	1659 aa		4.6	□□□□□ -1.67
NOP4	YPL043W	VMR1	P38735	1592 aa		4.6	□□□□□ -1.67
NOP4	YPL043W	YDL129W	Q07555	291 aa		4.6	□□□□□ -1.67
NOP4	YPL043W	NUP188	P52593	1655 aa	Known RBP	4.59	□□□□□ -1.67
NOP4	YPL043W	NAP1	P25293	417 aa	Known RBP	4.58	□□□□□ -1.68
NOP4	YPL043W	DPS1	P04802	557 aa	Known RBP	4.58	□□□□□ -1.68
NOP4	YPL043W	YAP3	P38749	330 aa		4.57	□□□□□ -1.68
NOP4	YPL043W	DNF3	Q12674	1656 aa		4.56	□□□□□ -1.68
NOP4	YPL043W	PDR5	P33302	1511 aa	Known RBP	4.56	□□□□□ -1.68
NOP4	YPL043W	VRP1	P37370	817 aa		4.56	□□□□□ -1.68
NOP4	YPL043W	DAN4	P47179	1161 aa		4.56	□□□□□ -1.68
NOP4	YPL043W	JIP4	Q03361	876 aa		4.56	□□□□□ -1.68
NOP4	YPL043W	PDR11	P40550	1411 aa		4.56	□□□□□ -1.68
NOP4	YPL043W	MIF2	P35201	549 aa		4.55	□□□□□ -1.68
NOP4	YPL043W	TYS1	P36421	394 aa	Known RBP	4.55	□□□□□ -1.68
NOP4	YPL043W	IPL1	P38991	367 aa		4.55	□□□□□ -1.68
NOP4	YPL043W	IML1	P47170	1584 aa		4.55	□□□□□ -1.68
NOP4	YPL043W	MGA2	P40578	1113 aa		4.54	□□□□□ -1.68
NOP4	YPL043W	YML020W	Q03722	664 aa		4.54	□□□□□ -1.68
NOP4	YPL043W	URN1	Q06525	465 aa	Known RBP	4.53	□□□□□ -1.68
NOP4	YPL043W	NOP8	Q08287	484 aa	Predicted RBP	4.52	□□□□□ -1.69
NOP4	YPL043W	SAM3	Q08986	587 aa		4.52	□□□□□ -1.69
NOP4	YPL043W	VMA1	P17255	1071 aa	Known RBP	4.51	□□□□□ -1.69
NOP4	YPL043W	MRM1	P25270	412 aa		4.51	□□□□□ -1.69
NOP4	YPL043W	RAM2	P29703	316 aa		4.5	□□□□□ -1.69
NOP4	YPL043W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
NOP4	YPL043W	HAP1	P0CE41	1502 aa		4.5	□□□□□ -1.69
NOP4	YPL043W	SPB4	P25808	606 aa	Predicted RBP	4.5	□□□□□ -1.69
NOP4	YPL043W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
NOP4	YPL043W	MAK10	Q02197	733 aa		4.5	□□□□□ -1.69
NOP4	YPL043W	RAV1	P47104	1357 aa		4.5	□□□□□ -1.69
NOP4	YPL043W	DBP1	P24784	617 aa	Known RBP	4.49	□□□□□ -1.69
NOP4	YPL043W	VPS70	P47161	811 aa		4.49	□□□□□ -1.69
NOP4	YPL043W	YPR148C	Q06523	435 aa		4.49	□□□□□ -1.69
NOP4	YPL043W	NUP192	P47054	1683 aa		4.48	□□□□□ -1.69
NOP4	YPL043W	KIN1	P13185	1064 aa		4.48	□□□□□ -1.69
NOP4	YPL043W	PAF1	P38351	445 aa		4.48	□□□□□ -1.69
NOP4	YPL043W	PSD2	P53037	1138 aa	Known RBP	4.48	□□□□□ -1.69
NOP4	YPL043W	USO1	P25386	1790 aa		4.48	□□□□□ -1.69
NOP4	YPL043W	RTC1	Q08281	1341 aa		4.47	□□□□□ -1.69
NOP4	YPL043W	GUA1	P38625	525 aa	Known RBP	4.47	□□□□□ -1.69
NOP4	YPL043W	NOP7	P53261	605 aa	Known RBP	4.47	□□□□□ -1.69
NOP4	YPL043W	SET1	P38827	1080 aa	Known RBP	4.46	□□□□□ -1.7
NOP4	YPL043W	RCR1	P38212	213 aa		4.45	□□□□□ -1.7
NOP4	YPL043W	SRC1	Q03707	834 aa		4.45	□□□□□ -1.7
NOP4	YPL043W	MAM3	Q12296	706 aa		4.45	□□□□□ -1.7
NOP4	YPL043W	YFR006W	P43590	535 aa		4.45	□□□□□ -1.7
NOP4	YPL043W	HTA1	P04911	132 aa	Known RBP	4.44	□□□□□ -1.7
NOP4	YPL043W	HTA2	P04912	132 aa		4.44	□□□□□ -1.7
NOP4	YPL043W	DSF2	P38213	736 aa		4.44	□□□□□ -1.7
NOP4	YPL043W	PTC4	P38089	393 aa		4.44	□□□□□ -1.7
NOP4	YPL043W	RAD9	P14737	1309 aa		4.43	□□□□□ -1.7
NOP4	YPL043W	GLC3	P32775	704 aa		4.43	□□□□□ -1.7
NOP4	YPL043W	ELP4	Q02884	456 aa	Known RBP	4.43	□□□□□ -1.7
NOP4	YPL043W	BCK1	Q01389	1478 aa		4.43	□□□□□ -1.7
NOP4	YPL043W	YEL023C	P39992	682 aa		4.42	□□□□□ -1.7
NOP4	YPL043W	SLX8	P40072	274 aa		4.42	□□□□□ -1.7
NOP4	YPL043W	KRE5	P22023	1365 aa		4.42	□□□□□ -1.7
NOP4	YPL043W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.42	□□□□□ -1.7
NOP4	YPL043W	ALD4	P46367	519 aa	Known RBP	4.42	□□□□□ -1.7
NOP4	YPL043W	GYP5	Q12344	894 aa		4.42	□□□□□ -1.7
NOP4	YPL043W	TAF5	P38129	798 aa		4.41	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms