RNA–Protein interactions for RNA: YNL187W

SWT21, Transcript of Protein involved in mRNA splicing, yeastyeast

Gene SWT21, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT21YNL187W PDS5Q04264 1277 aa11.32□□□□□ -0.6
SWT21YNL187W PSD2P53037 1138 aaKnown RBP11.31□□□□□ -0.6
SWT21YNL187W TY1B-NL2Q99337 1749 aaKnown RBP11.31□□□□□ -0.6
SWT21YNL187W MRPL32P25348 183 aa11.29□□□□□ -0.6
SWT21YNL187W NSR1P27476 414 aaKnown RBP RIP-Chip data11.28□□□□□ -0.6not detected
SWT21YNL187W CHZ1P40019 153 aaPredicted RBP11.28□□□□□ -0.6
SWT21YNL187W MIF2P35201 549 aa11.27□□□□□ -0.61
SWT21YNL187W YNR029CP53729 429 aaKnown RBP11.26□□□□□ -0.61
SWT21YNL187W NST1P53935 1240 aa11.26□□□□□ -0.61
SWT21YNL187W RCM1P53972 490 aa11.26□□□□□ -0.61
SWT21YNL187W MLP1Q02455 1875 aaKnown RBP11.25□□□□□ -0.61
SWT21YNL187W SCT1P32784 759 aa11.24□□□□□ -0.61
SWT21YNL187W RTG3P38165 486 aa11.24□□□□□ -0.61
SWT21YNL187W ENP1P38333 483 aaKnown RBP11.23□□□□□ -0.61
SWT21YNL187W PPH3P32345 308 aa11.22□□□□□ -0.61
SWT21YNL187W YML133CQ03099 1374 aa11.2□□□□□ -0.62
SWT21YNL187W YLL067CQ07888 1374 aa11.2□□□□□ -0.62
SWT21YNL187W YLL066CQ99208 1374 aa11.2□□□□□ -0.62
SWT21YNL187W FKH1P40466 484 aa11.19□□□□□ -0.62
SWT21YNL187W PSK1P31374 1356 aa11.18□□□□□ -0.62
SWT21YNL187W THI12P42883 340 aa11.17□□□□□ -0.62
SWT21YNL187W THI5P43534 340 aa11.17□□□□□ -0.62
SWT21YNL187W THI11P47183 340 aa11.17□□□□□ -0.62
SWT21YNL187W THI13Q07748 340 aa11.17□□□□□ -0.62
SWT21YNL187W YMR196WQ04336 1088 aa11.16□□□□□ -0.62
SWT21YNL187W CPS1P27614 576 aa11.14□□□□□ -0.63
SWT21YNL187W YEF3P16521 1044 aaKnown RBP11.08□□□□□ -0.64
SWT21YNL187W LEU2P04173 364 aaPredicted RBP11.07□□□□□ -0.64
SWT21YNL187W TRK1P12685 1235 aa11.07□□□□□ -0.64
SWT21YNL187W TY4B-HP0C2J7 1802 aa11.07□□□□□ -0.64
SWT21YNL187W TY4B-JP47024 1803 aa11.07□□□□□ -0.64
SWT21YNL187W CSE4P36012 229 aa11.03□□□□□ -0.64
SWT21YNL187W MTR4P47047 1073 aaKnown RBP11.03□□□□□ -0.64
SWT21YNL187W ADE6P38972 1358 aaKnown RBP11.03□□□□□ -0.64
SWT21YNL187W RPS24AP0CX31 135 aaKnown RBP11.02□□□□□ -0.65
SWT21YNL187W RPS24BP0CX32 135 aaKnown RBP11.02□□□□□ -0.65
SWT21YNL187W SNF2P22082 1703 aa11.01□□□□□ -0.65
SWT21YNL187W PDI1P17967 522 aaKnown RBP11□□□□□ -0.65
SWT21YNL187W PRS1P32895 427 aaKnown RBP11□□□□□ -0.65
SWT21YNL187W AUS1Q08409 1394 aa11□□□□□ -0.65
SWT21YNL187W KAR2P16474 682 aaKnown RBP10.99□□□□□ -0.65
SWT21YNL187W YGL015CP33199 130 aa10.99□□□□□ -0.65
SWT21YNL187W YFR006WP43590 535 aa10.99□□□□□ -0.65
SWT21YNL187W HIM1Q06674 414 aa10.99□□□□□ -0.65
SWT21YNL187W RTF1P53064 558 aa10.98□□□□□ -0.65
SWT21YNL187W TAP42Q04372 366 aa10.97□□□□□ -0.65
SWT21YNL187W PRP43P53131 767 aaKnown RBP10.96□□□□□ -0.65
SWT21YNL187W GAS4Q08271 471 aa10.96□□□□□ -0.65
SWT21YNL187W YIL177CP40434 1758 aa10.95□□□□□ -0.66
SWT21YNL187W YJL225CP40889 1758 aa10.95□□□□□ -0.66
SWT21YNL187W DPS1P04802 557 aaKnown RBP10.94□□□□□ -0.66
SWT21YNL187W PAP2P53632 584 aaKnown RBP10.94□□□□□ -0.66
SWT21YNL187W RRP5Q05022 1729 aaKnown RBP10.93□□□□□ -0.66
SWT21YNL187W GRX4P32642 244 aa10.92□□□□□ -0.66
SWT21YNL187W RRP46P53256 223 aaPredicted RBP10.92□□□□□ -0.66
SWT21YNL187W YDL144CQ07589 356 aa10.92□□□□□ -0.66
SWT21YNL187W RPL17AP05740 184 aaKnown RBP10.91□□□□□ -0.66
SWT21YNL187W PTP3P40048 928 aa10.91□□□□□ -0.66
SWT21YNL187W RPL17BP46990 184 aaKnown RBP10.91□□□□□ -0.66
SWT21YNL187W YRF1-2P40105 1681 aa10.9□□□□□ -0.66
SWT21YNL187W RTR1P40084 226 aaPredicted RBP10.9□□□□□ -0.66
SWT21YNL187W MPP10P47083 593 aaKnown RBP10.9□□□□□ -0.66
SWT21YNL187W PRP45P28004 379 aaPredicted RBP10.89□□□□□ -0.67
SWT21YNL187W PRP5P21372 849 aaPredicted RBP10.88□□□□□ -0.67
SWT21YNL187W REB1P21538 810 aa10.88□□□□□ -0.67
SWT21YNL187W RPO41P13433 1351 aaKnown RBP10.87□□□□□ -0.67
SWT21YNL187W URB1P34241 1764 aaKnown RBP10.86□□□□□ -0.67
SWT21YNL187W FKS3Q04952 1785 aa10.86□□□□□ -0.67
SWT21YNL187W IOC4Q04213 475 aa10.86□□□□□ -0.67
SWT21YNL187W FUN12P39730 1002 aaKnown RBP10.85□□□□□ -0.67
SWT21YNL187W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.85□□□□□ -0.67not detected
SWT21YNL187W MSB3P48566 633 aaPredicted RBP10.85□□□□□ -0.67
SWT21YNL187W RPP0P05317 312 aaKnown RBP10.84□□□□□ -0.67
SWT21YNL187W VPS27P40343 622 aaKnown RBP10.84□□□□□ -0.67
SWT21YNL187W CDC45Q08032 650 aa10.84□□□□□ -0.67
SWT21YNL187W SUI2P20459 304 aaKnown RBP10.83□□□□□ -0.68
SWT21YNL187W RVB2Q12464 471 aaKnown RBP10.83□□□□□ -0.68
SWT21YNL187W APC1P53886 1748 aa10.81□□□□□ -0.68
SWT21YNL187W THI22Q06490 572 aa10.81□□□□□ -0.68
SWT21YNL187W SLM3Q12093 417 aa10.81□□□□□ -0.68
SWT21YNL187W PRD1P25375 712 aa10.8□□□□□ -0.68
SWT21YNL187W TPD3P31383 635 aa10.78□□□□□ -0.68
SWT21YNL187W AKL1P38080 1108 aaKnown RBP10.78□□□□□ -0.68
SWT21YNL187W SAP155P43612 1002 aa10.78□□□□□ -0.68
SWT21YNL187W ENT1Q12518 454 aa10.78□□□□□ -0.68
SWT21YNL187W NOP2P40991 618 aaKnown RBP10.77□□□□□ -0.69
SWT21YNL187W APP1P53933 587 aa10.77□□□□□ -0.69
SWT21YNL187W YRF1-4O13559 1382 aa10.77□□□□□ -0.69
SWT21YNL187W AVT3P36062 692 aa10.76□□□□□ -0.69
SWT21YNL187W XKS1P42826 600 aa10.76□□□□□ -0.69
SWT21YNL187W DSD1P53095 428 aa10.76□□□□□ -0.69
SWT21YNL187W TCB1Q12466 1186 aa10.76□□□□□ -0.69
SWT21YNL187W RTT109Q07794 436 aa10.75□□□□□ -0.69
SWT21YNL187W HEF3P53978 1044 aaKnown RBP10.73□□□□□ -0.69
SWT21YNL187W ENV9Q08651 330 aa10.73□□□□□ -0.69
SWT21YNL187W RSF2P46974 1380 aa10.73□□□□□ -0.69
SWT21YNL187W HSP104P31539 908 aaKnown RBP10.71□□□□□ -0.69
SWT21YNL187W RCR1P38212 213 aa10.7□□□□□ -0.7
SWT21YNL187W NTH2P35172 780 aa10.69□□□□□ -0.7
SWT21YNL187W YAH1Q12184 172 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms