RNA–Protein interactions for RNA: YNL097C

PHO23, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene PHO23, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO23YNL097C RCM1P53972 490 aa12.21□□□□□ -0.45
PHO23YNL097C THI13Q07748 340 aa12.21□□□□□ -0.45
PHO23YNL097C PDS5Q04264 1277 aa12.19□□□□□ -0.46
PHO23YNL097C YFR006WP43590 535 aa12.18□□□□□ -0.46
PHO23YNL097C SEC3P33332 1336 aaKnown RBP12.16□□□□□ -0.46
PHO23YNL097C SPT7P35177 1332 aa12.15□□□□□ -0.46
PHO23YNL097C LEU3P08638 886 aa12.14□□□□□ -0.47
PHO23YNL097C PPH3P32345 308 aa12.14□□□□□ -0.47
PHO23YNL097C RTG3P38165 486 aa12.11□□□□□ -0.47
PHO23YNL097C PSD2P53037 1138 aaKnown RBP12.11□□□□□ -0.47
PHO23YNL097C PSK1P31374 1356 aa12.1□□□□□ -0.47
PHO23YNL097C CPS1P27614 576 aa12.1□□□□□ -0.47
PHO23YNL097C FKH1P40466 484 aa12.07□□□□□ -0.48
PHO23YNL097C YML133CQ03099 1374 aa12.04□□□□□ -0.48
PHO23YNL097C YLL067CQ07888 1374 aa12.04□□□□□ -0.48
PHO23YNL097C YLL066CQ99208 1374 aa12.04□□□□□ -0.48
PHO23YNL097C TY4B-HP0C2J7 1802 aa12.03□□□□□ -0.48
PHO23YNL097C TY4B-JP47024 1803 aa12.03□□□□□ -0.48
PHO23YNL097C NST1P53935 1240 aa12.03□□□□□ -0.48
PHO23YNL097C NOP2P40991 618 aaKnown RBP12.02□□□□□ -0.49
PHO23YNL097C LEU2P04173 364 aaPredicted RBP12.01□□□□□ -0.49
PHO23YNL097C NSR1P27476 414 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
PHO23YNL097C CSE4P36012 229 aa11.98□□□□□ -0.49
PHO23YNL097C ENP1P38333 483 aaKnown RBP11.98□□□□□ -0.49
PHO23YNL097C MTR4P47047 1073 aaKnown RBP11.98□□□□□ -0.49
PHO23YNL097C RPS24AP0CX31 135 aaKnown RBP11.95□□□□□ -0.5
PHO23YNL097C RPS24BP0CX32 135 aaKnown RBP11.95□□□□□ -0.5
PHO23YNL097C ADE6P38972 1358 aaKnown RBP11.93□□□□□ -0.5
PHO23YNL097C PDI1P17967 522 aaKnown RBP11.93□□□□□ -0.5
PHO23YNL097C RTF1P53064 558 aa11.93□□□□□ -0.5
PHO23YNL097C RRP5Q05022 1729 aaKnown RBP11.91□□□□□ -0.5
PHO23YNL097C PTP3P40048 928 aa11.9□□□□□ -0.5
PHO23YNL097C TRK1P12685 1235 aa11.89□□□□□ -0.51
PHO23YNL097C KAR2P16474 682 aaKnown RBP11.89□□□□□ -0.51
PHO23YNL097C YEF3P16521 1044 aaKnown RBP11.89□□□□□ -0.51
PHO23YNL097C GAS4Q08271 471 aa11.89□□□□□ -0.51
PHO23YNL097C PRP45P28004 379 aaPredicted RBP11.88□□□□□ -0.51
PHO23YNL097C PRP43P53131 767 aaKnown RBP11.88□□□□□ -0.51
PHO23YNL097C TAP42Q04372 366 aa11.87□□□□□ -0.51
PHO23YNL097C HIM1Q06674 414 aa11.87□□□□□ -0.51
PHO23YNL097C DPS1P04802 557 aaKnown RBP11.86□□□□□ -0.51
PHO23YNL097C ISW2Q08773 1120 aa11.86□□□□□ -0.51
PHO23YNL097C PRP5P21372 849 aaPredicted RBP11.85□□□□□ -0.51
PHO23YNL097C YIL177CP40434 1758 aa11.84□□□□□ -0.51
PHO23YNL097C YJL225CP40889 1758 aa11.84□□□□□ -0.51
PHO23YNL097C GRX4P32642 244 aa11.84□□□□□ -0.51
PHO23YNL097C PAP2P53632 584 aaKnown RBP11.84□□□□□ -0.51
PHO23YNL097C SNF2P22082 1703 aa11.83□□□□□ -0.52
PHO23YNL097C AUS1Q08409 1394 aa11.83□□□□□ -0.52
PHO23YNL097C FKS3Q04952 1785 aa11.81□□□□□ -0.52
PHO23YNL097C URB1P34241 1764 aaKnown RBP11.8□□□□□ -0.52
PHO23YNL097C REB1P21538 810 aa11.8□□□□□ -0.52
PHO23YNL097C YRF1-2P40105 1681 aa11.8□□□□□ -0.52
PHO23YNL097C ENT1Q12518 454 aa11.79□□□□□ -0.52
PHO23YNL097C MSB3P48566 633 aaPredicted RBP11.78□□□□□ -0.52
PHO23YNL097C APP1P53933 587 aa11.77□□□□□ -0.53
PHO23YNL097C SLM3Q12093 417 aa11.75□□□□□ -0.53
PHO23YNL097C RTR1P40084 226 aaPredicted RBP11.74□□□□□ -0.53
PHO23YNL097C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.74□□□□□ -0.53not detected
PHO23YNL097C YAH1Q12184 172 aaKnown RBP11.74□□□□□ -0.53
PHO23YNL097C TCB1Q12466 1186 aa11.74□□□□□ -0.53
PHO23YNL097C RPO41P13433 1351 aaKnown RBP11.74□□□□□ -0.53
PHO23YNL097C YDL144CQ07589 356 aa11.73□□□□□ -0.53
PHO23YNL097C RRP46P53256 223 aaPredicted RBP11.72□□□□□ -0.53
PHO23YNL097C ENV9Q08651 330 aa11.72□□□□□ -0.53
PHO23YNL097C PRS1P32895 427 aaKnown RBP11.71□□□□□ -0.53
PHO23YNL097C MPP10P47083 593 aaKnown RBP11.71□□□□□ -0.53
PHO23YNL097C APC1P53886 1748 aa11.71□□□□□ -0.54
PHO23YNL097C XKS1P42826 600 aa11.7□□□□□ -0.54
PHO23YNL097C IOC4Q04213 475 aa11.7□□□□□ -0.54
PHO23YNL097C RPG1P38249 964 aaKnown RBP11.68□□□□□ -0.54
PHO23YNL097C RSF2P46974 1380 aa11.67□□□□□ -0.54
PHO23YNL097C RPP0P05317 312 aaKnown RBP11.66□□□□□ -0.54
PHO23YNL097C AKL1P38080 1108 aaKnown RBP11.66□□□□□ -0.54
PHO23YNL097C VPS27P40343 622 aaKnown RBP11.66□□□□□ -0.54
PHO23YNL097C IMH1Q06704 911 aaKnown RBP11.65□□□□□ -0.54
PHO23YNL097C CDC45Q08032 650 aa11.65□□□□□ -0.54
PHO23YNL097C YRF1-3P0CX14 1859 aa11.64□□□□□ -0.55
PHO23YNL097C YRF1-7P0CX15 1859 aa11.64□□□□□ -0.55
PHO23YNL097C YRF1-6P53819 1859 aa11.64□□□□□ -0.55
PHO23YNL097C PRD1P25375 712 aa11.64□□□□□ -0.55
PHO23YNL097C IES2P40154 320 aa11.64□□□□□ -0.55
PHO23YNL097C DSD1P53095 428 aa11.64□□□□□ -0.55
PHO23YNL097C HSP104P31539 908 aaKnown RBP11.62□□□□□ -0.55
PHO23YNL097C RCR1P38212 213 aa11.62□□□□□ -0.55
PHO23YNL097C THI22Q06490 572 aa11.61□□□□□ -0.55
PHO23YNL097C SUI2P20459 304 aaKnown RBP11.6□□□□□ -0.55
PHO23YNL097C TPD3P31383 635 aa11.6□□□□□ -0.55
PHO23YNL097C SAP155P43612 1002 aa11.6□□□□□ -0.55
PHO23YNL097C YRF1-4O13559 1382 aa11.59□□□□□ -0.55
PHO23YNL097C RVB2Q12464 471 aaKnown RBP11.59□□□□□ -0.55
PHO23YNL097C SIR4P11978 1358 aa11.58□□□□□ -0.56
PHO23YNL097C YIL055CP40523 627 aaKnown RBP11.57□□□□□ -0.56
PHO23YNL097C YKL133CP36066 463 aa11.56□□□□□ -0.56
PHO23YNL097C FUN12P39730 1002 aaKnown RBP11.56□□□□□ -0.56
PHO23YNL097C AOS1Q06624 347 aa11.56□□□□□ -0.56
PHO23YNL097C RTT109Q07794 436 aa11.56□□□□□ -0.56
PHO23YNL097C NTH2P35172 780 aa11.55□□□□□ -0.56
PHO23YNL097C MEC3Q02574 474 aa11.55□□□□□ -0.56
PHO23YNL097C CTF4Q01454 927 aa11.54□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms