RNA–Protein interactions for RNA: YMR269W

TMA23, Transcript of Nucleolar protein implicated in ribosome biogenesis, yeastyeast

Gene TMA23, Length 636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMA23YMR269W CPS1P27614 576 aa11.88□□□□□ -0.51
TMA23YMR269W PDS5Q04264 1277 aa11.86□□□□□ -0.51
TMA23YMR269W PSK1P31374 1356 aa11.85□□□□□ -0.51
TMA23YMR269W RTG3P38165 486 aa11.82□□□□□ -0.52
TMA23YMR269W FKH1P40466 484 aa11.82□□□□□ -0.52
TMA23YMR269W YML133CQ03099 1374 aa11.81□□□□□ -0.52
TMA23YMR269W YLL067CQ07888 1374 aa11.81□□□□□ -0.52
TMA23YMR269W YLL066CQ99208 1374 aa11.81□□□□□ -0.52
TMA23YMR269W SPT7P35177 1332 aa11.79□□□□□ -0.52
TMA23YMR269W PSD2P53037 1138 aaKnown RBP11.78□□□□□ -0.52
TMA23YMR269W SEC3P33332 1336 aaKnown RBP11.78□□□□□ -0.52
TMA23YMR269W NST1P53935 1240 aa11.76□□□□□ -0.53
TMA23YMR269W LEU2P04173 364 aaPredicted RBP11.75□□□□□ -0.53
TMA23YMR269W PTP3P40048 928 aa11.75□□□□□ -0.53
TMA23YMR269W ADE6P38972 1358 aaKnown RBP11.74□□□□□ -0.53
TMA23YMR269W MLP1Q02455 1875 aaKnown RBP11.74□□□□□ -0.53
TMA23YMR269W LEU3P08638 886 aa11.73□□□□□ -0.53
TMA23YMR269W MTR4P47047 1073 aaKnown RBP11.73□□□□□ -0.53
TMA23YMR269W CSE4P36012 229 aa11.7□□□□□ -0.54
TMA23YMR269W RPS24AP0CX31 135 aaKnown RBP11.69□□□□□ -0.54
TMA23YMR269W RPS24BP0CX32 135 aaKnown RBP11.69□□□□□ -0.54
TMA23YMR269W PRP43P53131 767 aaKnown RBP11.68□□□□□ -0.54
TMA23YMR269W TY4B-HP0C2J7 1802 aa11.67□□□□□ -0.54
TMA23YMR269W TY4B-JP47024 1803 aa11.67□□□□□ -0.54
TMA23YMR269W YEF3P16521 1044 aaKnown RBP11.65□□□□□ -0.54
TMA23YMR269W PRP45P28004 379 aaPredicted RBP11.64□□□□□ -0.55
TMA23YMR269W PDI1P17967 522 aaKnown RBP11.63□□□□□ -0.55
TMA23YMR269W PRP5P21372 849 aaPredicted RBP11.63□□□□□ -0.55
TMA23YMR269W TRK1P12685 1235 aa11.62□□□□□ -0.55
TMA23YMR269W RRP5Q05022 1729 aaKnown RBP11.61□□□□□ -0.55
TMA23YMR269W RTF1P53064 558 aa11.61□□□□□ -0.55
TMA23YMR269W TAP42Q04372 366 aa11.61□□□□□ -0.55
TMA23YMR269W AUS1Q08409 1394 aa11.6□□□□□ -0.55
TMA23YMR269W REB1P21538 810 aa11.6□□□□□ -0.55
TMA23YMR269W APP1P53933 587 aa11.6□□□□□ -0.55
TMA23YMR269W HIM1Q06674 414 aa11.6□□□□□ -0.55
TMA23YMR269W GAS4Q08271 471 aa11.6□□□□□ -0.55
TMA23YMR269W ENP1P38333 483 aaKnown RBP11.59□□□□□ -0.55
TMA23YMR269W YAH1Q12184 172 aaKnown RBP11.59□□□□□ -0.55
TMA23YMR269W ENT1Q12518 454 aa11.59□□□□□ -0.55
TMA23YMR269W DPS1P04802 557 aaKnown RBP11.58□□□□□ -0.56
TMA23YMR269W KAR2P16474 682 aaKnown RBP11.57□□□□□ -0.56
TMA23YMR269W GRX4P32642 244 aa11.56□□□□□ -0.56
TMA23YMR269W MSB3P48566 633 aaPredicted RBP11.56□□□□□ -0.56
TMA23YMR269W YRF1-2P40105 1681 aa11.53□□□□□ -0.56
TMA23YMR269W NSR1P27476 414 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56not detected
TMA23YMR269W ENV9Q08651 330 aa11.53□□□□□ -0.56
TMA23YMR269W SLM3Q12093 417 aa11.53□□□□□ -0.56
TMA23YMR269W YIL177CP40434 1758 aa11.51□□□□□ -0.57
TMA23YMR269W YJL225CP40889 1758 aa11.51□□□□□ -0.57
TMA23YMR269W PAP2P53632 584 aaKnown RBP11.49□□□□□ -0.57
TMA23YMR269W TCB1Q12466 1186 aa11.49□□□□□ -0.57
TMA23YMR269W RRP46P53256 223 aaPredicted RBP11.48□□□□□ -0.57
TMA23YMR269W RPO41P13433 1351 aaKnown RBP11.47□□□□□ -0.57
TMA23YMR269W XKS1P42826 600 aa11.46□□□□□ -0.57
TMA23YMR269W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
TMA23YMR269W IOC4Q04213 475 aa11.45□□□□□ -0.58
TMA23YMR269W RSF2P46974 1380 aa11.44□□□□□ -0.58
TMA23YMR269W IMH1Q06704 911 aaKnown RBP11.44□□□□□ -0.58
TMA23YMR269W URB1P34241 1764 aaKnown RBP11.44□□□□□ -0.58
TMA23YMR269W FKS3Q04952 1785 aa11.42□□□□□ -0.58
TMA23YMR269W RTR1P40084 226 aaPredicted RBP11.42□□□□□ -0.58
TMA23YMR269W IES2P40154 320 aa11.42□□□□□ -0.58
TMA23YMR269W SNF2P22082 1703 aa11.42□□□□□ -0.58
TMA23YMR269W YIL055CP40523 627 aaKnown RBP11.4□□□□□ -0.58
TMA23YMR269W YDL144CQ07589 356 aa11.4□□□□□ -0.58
TMA23YMR269W APC1P53886 1748 aa11.4□□□□□ -0.58
TMA23YMR269W AKL1P38080 1108 aaKnown RBP11.39□□□□□ -0.59
TMA23YMR269W RCR1P38212 213 aa11.39□□□□□ -0.59
TMA23YMR269W MPP10P47083 593 aaKnown RBP11.39□□□□□ -0.59
TMA23YMR269W PRS1P32895 427 aaKnown RBP11.38□□□□□ -0.59
TMA23YMR269W DSD1P53095 428 aa11.38□□□□□ -0.59
TMA23YMR269W PRD1P25375 712 aa11.36□□□□□ -0.59
TMA23YMR269W YRF1-4O13559 1382 aa11.36□□□□□ -0.59
TMA23YMR269W SIR4P11978 1358 aa11.35□□□□□ -0.59
TMA23YMR269W RPP0P05317 312 aaKnown RBP11.34□□□□□ -0.59
TMA23YMR269W HSP104P31539 908 aaKnown RBP11.34□□□□□ -0.59
TMA23YMR269W YRF1-3P0CX14 1859 aa11.34□□□□□ -0.59
TMA23YMR269W YRF1-7P0CX15 1859 aa11.34□□□□□ -0.59
TMA23YMR269W YRF1-6P53819 1859 aa11.34□□□□□ -0.59
TMA23YMR269W YKL133CP36066 463 aa11.33□□□□□ -0.6
TMA23YMR269W THI22Q06490 572 aa11.33□□□□□ -0.6
TMA23YMR269W VPS27P40343 622 aaKnown RBP11.32□□□□□ -0.6
TMA23YMR269W DOT5P40553 215 aa11.32□□□□□ -0.6
TMA23YMR269W SUI2P20459 304 aaKnown RBP11.3□□□□□ -0.6
TMA23YMR269W NTH2P35172 780 aa11.3□□□□□ -0.6
TMA23YMR269W SAP155P43612 1002 aa11.3□□□□□ -0.6
TMA23YMR269W CDC45Q08032 650 aa11.3□□□□□ -0.6
TMA23YMR269W ROM2P51862 1356 aaKnown RBP11.29□□□□□ -0.6
TMA23YMR269W ADE16P54113 591 aaKnown RBP11.29□□□□□ -0.6
TMA23YMR269W TPD3P31383 635 aa11.28□□□□□ -0.6
TMA23YMR269W CTF4Q01454 927 aa11.28□□□□□ -0.6
TMA23YMR269W FOX2Q02207 900 aaKnown RBP11.28□□□□□ -0.6
TMA23YMR269W MEC3Q02574 474 aa11.28□□□□□ -0.6
TMA23YMR269W RTT109Q07794 436 aa11.28□□□□□ -0.6
TMA23YMR269W INP54Q08227 384 aaKnown RBP11.28□□□□□ -0.6
TMA23YMR269W FRK1Q03002 865 aaPredicted RBP11.27□□□□□ -0.61
TMA23YMR269W AOS1Q06624 347 aa11.27□□□□□ -0.61
TMA23YMR269W GLN1P32288 370 aaKnown RBP11.26□□□□□ -0.61
TMA23YMR269W YNL050CP53952 270 aa11.26□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms