RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W YNL108CP53929 270 aa7.32□□□□□ -1.24
YML040WYML040W YPR204WQ08995 1032 aa7.32□□□□□ -1.24
YML040WYML040W RTG2P32608 588 aaKnown RBP7.31□□□□□ -1.24
YML040WYML040W RTF1P53064 558 aa7.31□□□□□ -1.24
YML040WYML040W SPP1Q03012 353 aa7.31□□□□□ -1.24
YML040WYML040W YRR1Q12172 810 aa7.31□□□□□ -1.24
YML040WYML040W AIR2Q12476 344 aaKnown RBP7.31□□□□□ -1.24
YML040WYML040W ARG8P18544 423 aa7.3□□□□□ -1.24
YML040WYML040W CPS1P27614 576 aa7.3□□□□□ -1.24
YML040WYML040W YNL115CP53925 644 aa7.3□□□□□ -1.24
YML040WYML040W YNL035CP53962 389 aaKnown RBP7.3□□□□□ -1.24
YML040WYML040W PML39Q03760 334 aa7.3□□□□□ -1.24
YML040WYML040W MAK16P10962 306 aaPredicted RBP7.29□□□□□ -1.24
YML040WYML040W SPT5P27692 1063 aaKnown RBP7.29□□□□□ -1.24
YML040WYML040W YJL171CP46992 396 aa7.29□□□□□ -1.24
YML040WYML040W LAM6Q08001 693 aa7.29□□□□□ -1.24
YML040WYML040W ISU2Q12056 156 aa7.29□□□□□ -1.24
YML040WYML040W SLY41P22215 453 aa7.28□□□□□ -1.24
YML040WYML040W SLX8P40072 274 aa7.28□□□□□ -1.24
YML040WYML040W MRX10Q05648 414 aa7.28□□□□□ -1.24
YML040WYML040W NOB1Q08444 459 aaKnown RBP7.28□□□□□ -1.24
YML040WYML040W ENO2P00925 437 aaKnown RBP7.27□□□□□ -1.24
YML040WYML040W YDJ1P25491 409 aaKnown RBP7.27□□□□□ -1.24
YML040WYML040W FKH1P40466 484 aa7.27□□□□□ -1.25
YML040WYML040W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
YML040WYML040W ENO1P00924 437 aaKnown RBP7.26□□□□□ -1.25
YML040WYML040W RIM21P48565 533 aa7.26□□□□□ -1.25
YML040WYML040W NMA111P53920 997 aa7.26□□□□□ -1.25
YML040WYML040W ERF2Q06551 359 aa7.26□□□□□ -1.25
YML040WYML040W TRM1P15565 570 aaKnown RBP7.25□□□□□ -1.25
YML040WYML040W PEX29Q03370 554 aa7.25□□□□□ -1.25
YML040WYML040W SEC61P32915 480 aa7.24□□□□□ -1.25
YML040WYML040W KEX2P13134 814 aa7.23□□□□□ -1.25
YML040WYML040W PUP1P25043 261 aa7.23□□□□□ -1.25
YML040WYML040W NUD1P32336 851 aa7.23□□□□□ -1.25
YML040WYML040W RTG1P32607 177 aa7.22□□□□□ -1.25
YML040WYML040W PUS6P53294 404 aa7.22□□□□□ -1.25
YML040WYML040W NAF1P53919 492 aaKnown RBP7.22□□□□□ -1.25
YML040WYML040W PEP12P32854 288 aa7.21□□□□□ -1.26
YML040WYML040W SIS2P36024 562 aa7.21□□□□□ -1.26
YML040WYML040W YML083CQ04526 418 aa7.2□□□□□ -1.26
YML040WYML040W PDR1P12383 1068 aa7.19□□□□□ -1.26
YML040WYML040W RDS2P19541 446 aaKnown RBP7.19□□□□□ -1.26
YML040WYML040W LDB19Q12502 818 aa7.19□□□□□ -1.26
YML040WYML040W STR2P47164 639 aa7.18□□□□□ -1.26
YML040WYML040W AGE1Q04412 482 aa7.18□□□□□ -1.26
YML040WYML040W TGL4P36165 910 aa7.17□□□□□ -1.26
YML040WYML040W ISM1P48526 1002 aa7.17□□□□□ -1.26
YML040WYML040W MCM16Q12262 181 aa7.17□□□□□ -1.26
YML040WYML040W CDC3P32457 520 aaKnown RBP7.16□□□□□ -1.26
YML040WYML040W YPP1P46951 817 aa7.16□□□□□ -1.26
YML040WYML040W YDL129WQ07555 291 aa7.16□□□□□ -1.26
YML040WYML040W TY1A-DR4O74302 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-HP0C2I4 478 aaKnown RBP7.14□□□□□ -1.27
YML040WYML040W TY1A-AP0CX57 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-PR1P0CX58 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-ORP0CX59 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-PR2P0CX60 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-DR5P0CX65 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-ER2P0CX66 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-GR3P0CX67 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-LR1P0CX68 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-MR2P0CX69 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-JR2P47099 440 aa7.14□□□□□ -1.27
YML040WYML040W RPL34AP87262 121 aaPredicted RBP7.14□□□□□ -1.27
YML040WYML040W TY1A-DR1Q03856 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-ML1Q04706 440 aaKnown RBP7.14□□□□□ -1.27
YML040WYML040W TY1A-BRQ12217 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-NL2Q12470 440 aa7.14□□□□□ -1.27
YML040WYML040W TY1A-GR2Q12485 440 aa7.14□□□□□ -1.27
YML040WYML040W SEC2P17065 759 aa7.13□□□□□ -1.27
YML040WYML040W RAM1P22007 431 aa7.13□□□□□ -1.27
YML040WYML040W ARH1P48360 493 aa7.13□□□□□ -1.27
YML040WYML040W HAP5Q02516 242 aa7.13□□□□□ -1.27
YML040WYML040W YDR344CQ05510 147 aa7.13□□□□□ -1.27
YML040WYML040W NCR1Q12200 1170 aa7.13□□□□□ -1.27
YML040WYML040W MRX12P47084 519 aa7.12□□□□□ -1.27
YML040WYML040W TUB4P53378 473 aa7.12□□□□□ -1.27
YML040WYML040W NPL4P33755 580 aa7.11□□□□□ -1.27
YML040WYML040W SSF1P38789 453 aaPredicted RBP7.11□□□□□ -1.27
YML040WYML040W BMT6Q12291 365 aa7.11□□□□□ -1.27
YML040WYML040W YDL206WQ12424 762 aa7.11□□□□□ -1.27
YML040WYML040W RPA14P50106 137 aa7.1□□□□□ -1.27
YML040WYML040W TBF1Q02457 562 aa7.1□□□□□ -1.27
YML040WYML040W BUD20Q08004 166 aaPredicted RBP7.1□□□□□ -1.27
YML040WYML040W TFG1P41895 735 aaPredicted RBP7.09□□□□□ -1.27
YML040WYML040W YPR084WQ06821 456 aa7.09□□□□□ -1.27
YML040WYML040W YPR097WQ06839 1073 aa7.09□□□□□ -1.27
YML040WYML040W ISF1P32488 338 aa7.08□□□□□ -1.28
YML040WYML040W FIG4P42837 879 aa7.08□□□□□ -1.28
YML040WYML040W BNI4P53858 892 aa7.08□□□□□ -1.28
YML040WYML040W GCD11P32481 527 aaKnown RBP7.07□□□□□ -1.28
YML040WYML040W EMP47P43555 445 aa7.07□□□□□ -1.28
YML040WYML040W SEN54Q02825 467 aaPredicted RBP7.07□□□□□ -1.28
YML040WYML040W FRA1Q07825 749 aa7.07□□□□□ -1.28
YML040WYML040W SLD2P34252 453 aa7.06□□□□□ -1.28
YML040WYML040W APL6P46682 809 aa7.06□□□□□ -1.28
YML040WYML040W GAL2P13181 574 aa7.05□□□□□ -1.28
YML040WYML040W ECM23Q02710 187 aa7.05□□□□□ -1.28
YML040WYML040W YPR015CQ12531 247 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms