RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C SEC3P33332 1336 aaKnown RBP13.35□□□□□ -0.27
ARP6YLR085C SPT7P35177 1332 aa13.35□□□□□ -0.27
ARP6YLR085C TY3B-IQ7LHG5 1498 aaKnown RBP13.35□□□□□ -0.27
ARP6YLR085C NUP192P47054 1683 aa13.35□□□□□ -0.27
ARP6YLR085C MHP1P43638 1398 aa13.34□□□□□ -0.27
ARP6YLR085C TIF4632P39936 914 aaKnown RBP13.34□□□□□ -0.27
ARP6YLR085C NSR1P27476 414 aaKnown RBP RIP-Chip data13.31□□□□□ -0.28 RIP-Chip
ARP6YLR085C LEU3P08638 886 aa13.3□□□□□ -0.28
ARP6YLR085C RAD9P14737 1309 aa13.29□□□□□ -0.28
ARP6YLR085C ALD4P46367 519 aaKnown RBP13.28□□□□□ -0.28
ARP6YLR085C YLR419WQ06698 1435 aaKnown RBP13.28□□□□□ -0.28
ARP6YLR085C DNF3Q12674 1656 aa13.27□□□□□ -0.28
ARP6YLR085C SPE2P21182 396 aa13.27□□□□□ -0.29
ARP6YLR085C TAF8Q03750 510 aa13.27□□□□□ -0.29
ARP6YLR085C ENP1P38333 483 aaKnown RBP13.26□□□□□ -0.29
ARP6YLR085C CAB1Q04430 367 aa13.26□□□□□ -0.29
ARP6YLR085C PDS5Q04264 1277 aa13.24□□□□□ -0.29
ARP6YLR085C NAP1P25293 417 aaKnown RBP13.23□□□□□ -0.29
ARP6YLR085C SCT1P32784 759 aa13.23□□□□□ -0.29
ARP6YLR085C MRX12P47084 519 aa13.23□□□□□ -0.29
ARP6YLR085C PSD2P53037 1138 aaKnown RBP13.23□□□□□ -0.29
ARP6YLR085C BCK1Q01389 1478 aa13.21□□□□□ -0.29
ARP6YLR085C MAK10Q02197 733 aa13.19□□□□□ -0.3
ARP6YLR085C TGL3P40308 642 aa13.18□□□□□ -0.3
ARP6YLR085C KRE5P22023 1365 aa13.18□□□□□ -0.3
ARP6YLR085C HAP1P0CE41 1502 aa13.17□□□□□ -0.3
ARP6YLR085C RIA1P53893 1110 aa13.16□□□□□ -0.3
ARP6YLR085C YAH1Q12184 172 aaKnown RBP13.16□□□□□ -0.3
ARP6YLR085C CHZ1P40019 153 aaPredicted RBP13.15□□□□□ -0.3
ARP6YLR085C RSM7P47150 247 aa13.15□□□□□ -0.3
ARP6YLR085C EPS1P40557 701 aa13.13□□□□□ -0.31
ARP6YLR085C BBC1P47068 1157 aa13.11□□□□□ -0.31
ARP6YLR085C RTG3P38165 486 aa13.09□□□□□ -0.31
ARP6YLR085C BDF1P35817 686 aa13.07□□□□□ -0.32
ARP6YLR085C NST1P53935 1240 aa13.07□□□□□ -0.32
ARP6YLR085C RCM1P53972 490 aa13.05□□□□□ -0.32
ARP6YLR085C MLP1Q02455 1875 aaKnown RBP13.03□□□□□ -0.32
ARP6YLR085C CFT1Q06632 1357 aaKnown RBP13.03□□□□□ -0.32
ARP6YLR085C FKH1P40466 484 aa13.02□□□□□ -0.33
ARP6YLR085C AI2P03876 854 aa12.99□□□□□ -0.33
ARP6YLR085C USO1P25386 1790 aa12.99□□□□□ -0.33
ARP6YLR085C YNR029CP53729 429 aaKnown RBP12.98□□□□□ -0.33
ARP6YLR085C PPH3P32345 308 aa12.97□□□□□ -0.33
ARP6YLR085C TY1B-NL2Q99337 1749 aaKnown RBP12.94□□□□□ -0.34
ARP6YLR085C PRS1P32895 427 aaKnown RBP12.93□□□□□ -0.34
ARP6YLR085C PSK1P31374 1356 aa12.93□□□□□ -0.34
ARP6YLR085C YML133CQ03099 1374 aa12.91□□□□□ -0.34
ARP6YLR085C YLL067CQ07888 1374 aa12.91□□□□□ -0.34
ARP6YLR085C YLL066CQ99208 1374 aa12.91□□□□□ -0.34
ARP6YLR085C CPS1P27614 576 aa12.9□□□□□ -0.34
ARP6YLR085C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.9□□□□□ -0.34not detected
ARP6YLR085C YLR271WQ06152 274 aa12.89□□□□□ -0.35
ARP6YLR085C BUD31P25337 157 aaPredicted RBP12.88□□□□□ -0.35
ARP6YLR085C SSP1P38871 571 aa12.88□□□□□ -0.35
ARP6YLR085C YMR196WQ04336 1088 aa12.88□□□□□ -0.35
ARP6YLR085C TRK1P12685 1235 aa12.88□□□□□ -0.35
ARP6YLR085C LEU2P04173 364 aaPredicted RBP12.87□□□□□ -0.35
ARP6YLR085C YEF3P16521 1044 aaKnown RBP12.86□□□□□ -0.35
ARP6YLR085C NOP2P40991 618 aaKnown RBP12.85□□□□□ -0.35
ARP6YLR085C THI12P42883 340 aa12.84□□□□□ -0.35
ARP6YLR085C THI5P43534 340 aa12.84□□□□□ -0.35
ARP6YLR085C THI11P47183 340 aa12.84□□□□□ -0.35
ARP6YLR085C THI13Q07748 340 aa12.84□□□□□ -0.35
ARP6YLR085C KAR2P16474 682 aaKnown RBP12.83□□□□□ -0.36
ARP6YLR085C MIF2P35201 549 aa12.83□□□□□ -0.36
ARP6YLR085C PDI1P17967 522 aaKnown RBP12.82□□□□□ -0.36
ARP6YLR085C UBP9P39967 754 aa12.82□□□□□ -0.36
ARP6YLR085C MTR4P47047 1073 aaKnown RBP12.82□□□□□ -0.36
ARP6YLR085C CSE4P36012 229 aa12.81□□□□□ -0.36
ARP6YLR085C RTF1P53064 558 aa12.81□□□□□ -0.36
ARP6YLR085C YDL144CQ07589 356 aa12.79□□□□□ -0.36
ARP6YLR085C RPS24AP0CX31 135 aaKnown RBP12.78□□□□□ -0.36
ARP6YLR085C RPS24BP0CX32 135 aaKnown RBP12.78□□□□□ -0.36
ARP6YLR085C PAP2P53632 584 aaKnown RBP12.78□□□□□ -0.36
ARP6YLR085C HIM1Q06674 414 aa12.77□□□□□ -0.37
ARP6YLR085C TAP42Q04372 366 aa12.76□□□□□ -0.37
ARP6YLR085C GAS4Q08271 471 aa12.75□□□□□ -0.37
ARP6YLR085C RPP0P05317 312 aaKnown RBP12.74□□□□□ -0.37
ARP6YLR085C VPS27P40343 622 aaKnown RBP12.74□□□□□ -0.37
ARP6YLR085C CDC45Q08032 650 aa12.74□□□□□ -0.37
ARP6YLR085C SNF2P22082 1703 aa12.73□□□□□ -0.37
ARP6YLR085C GRX4P32642 244 aa12.73□□□□□ -0.37
ARP6YLR085C RTR1P40084 226 aaPredicted RBP12.73□□□□□ -0.37
ARP6YLR085C MPP10P47083 593 aaKnown RBP12.72□□□□□ -0.37
ARP6YLR085C IOC4Q04213 475 aa12.71□□□□□ -0.37
ARP6YLR085C ADE6P38972 1358 aaKnown RBP12.71□□□□□ -0.38
ARP6YLR085C DPS1P04802 557 aaKnown RBP12.7□□□□□ -0.38
ARP6YLR085C FUN12P39730 1002 aaKnown RBP12.7□□□□□ -0.38
ARP6YLR085C AUS1Q08409 1394 aa12.7□□□□□ -0.38
ARP6YLR085C PRP43P53131 767 aaKnown RBP12.69□□□□□ -0.38
ARP6YLR085C RRP46P53256 223 aaPredicted RBP12.68□□□□□ -0.38
ARP6YLR085C RVB2Q12464 471 aaKnown RBP12.68□□□□□ -0.38
ARP6YLR085C YOR238WQ08634 303 aa12.67□□□□□ -0.38
ARP6YLR085C TY4B-HP0C2J7 1802 aa12.65□□□□□ -0.38
ARP6YLR085C TY4B-JP47024 1803 aa12.65□□□□□ -0.38
ARP6YLR085C SUI2P20459 304 aaKnown RBP12.64□□□□□ -0.39
ARP6YLR085C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.62□□□□□ -0.39not detected
ARP6YLR085C YAP5P40574 245 aa12.62□□□□□ -0.39
ARP6YLR085C SAP155P43612 1002 aa12.62□□□□□ -0.39
ARP6YLR085C PRD1P25375 712 aa12.61□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms