RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W YRF1-2P40105 1681 aa8.17□□□□□ -1.1
LDB18YLL049W CDC27P38042 758 aa8.15□□□□□ -1.1
LDB18YLL049W GCN2P15442 1659 aa8.14□□□□□ -1.11
LDB18YLL049W SSA1P10591 642 aaKnown RBP8.14□□□□□ -1.11
LDB18YLL049W MRX12P47084 519 aa8.13□□□□□ -1.11
LDB18YLL049W RRP5Q05022 1729 aaKnown RBP8.12□□□□□ -1.11
LDB18YLL049W NUP192P47054 1683 aa8.08□□□□□ -1.12
LDB18YLL049W TY3B-IQ7LHG5 1498 aaKnown RBP8.06□□□□□ -1.12
LDB18YLL049W YBL086CP38177 466 aa8.06□□□□□ -1.12
LDB18YLL049W UBP1P25037 809 aa8.03□□□□□ -1.12
LDB18YLL049W GTT3P39996 337 aa8.03□□□□□ -1.12
LDB18YLL049W RRD1P40454 393 aaKnown RBP8.03□□□□□ -1.12
LDB18YLL049W UGA2P38067 497 aa8□□□□□ -1.13
LDB18YLL049W YKR023WP36119 530 aaKnown RBP7.99□□□□□ -1.13
LDB18YLL049W RPN11P43588 306 aaKnown RBP7.99□□□□□ -1.13
LDB18YLL049W URB1P34241 1764 aaKnown RBP7.99□□□□□ -1.13
LDB18YLL049W PRP45P28004 379 aaPredicted RBP7.96□□□□□ -1.14
LDB18YLL049W MAP2P38174 421 aaKnown RBP7.96□□□□□ -1.14
LDB18YLL049W UBP10P53874 792 aaPredicted RBP7.96□□□□□ -1.14
LDB18YLL049W CAB1Q04430 367 aa7.96□□□□□ -1.14
LDB18YLL049W SPT21P35209 758 aa7.94□□□□□ -1.14
LDB18YLL049W DOT5P40553 215 aa7.94□□□□□ -1.14
LDB18YLL049W LYS4P49367 693 aaPredicted RBP7.94□□□□□ -1.14
LDB18YLL049W EDE1P34216 1381 aa7.94□□□□□ -1.14
LDB18YLL049W LEU3P08638 886 aa7.93□□□□□ -1.14
LDB18YLL049W SSA2P10592 639 aaKnown RBP7.93□□□□□ -1.14
LDB18YLL049W NPR2P39923 615 aa7.93□□□□□ -1.14
LDB18YLL049W ALD4P46367 519 aaKnown RBP7.93□□□□□ -1.14
LDB18YLL049W RAD9P14737 1309 aa7.93□□□□□ -1.14
LDB18YLL049W TY4B-HP0C2J7 1802 aa7.92□□□□□ -1.14
LDB18YLL049W TY4B-JP47024 1803 aa7.92□□□□□ -1.14
LDB18YLL049W ALD2P47771 506 aa7.91□□□□□ -1.14
LDB18YLL049W FKS3Q04952 1785 aa7.91□□□□□ -1.14
LDB18YLL049W CTH1P47976 325 aa7.9□□□□□ -1.14
LDB18YLL049W PSK1P31374 1356 aa7.87□□□□□ -1.15
LDB18YLL049W RAV1P47104 1357 aa7.87□□□□□ -1.15
LDB18YLL049W PRP5P21372 849 aaPredicted RBP7.87□□□□□ -1.15
LDB18YLL049W TAF5P38129 798 aa7.87□□□□□ -1.15
LDB18YLL049W FOX2Q02207 900 aaKnown RBP7.87□□□□□ -1.15
LDB18YLL049W YRF1-3P0CX14 1859 aa7.87□□□□□ -1.15
LDB18YLL049W YRF1-7P0CX15 1859 aa7.87□□□□□ -1.15
LDB18YLL049W YRF1-6P53819 1859 aa7.87□□□□□ -1.15
LDB18YLL049W IES2P40154 320 aa7.85□□□□□ -1.15
LDB18YLL049W ROM2P51862 1356 aaKnown RBP7.84□□□□□ -1.15
LDB18YLL049W CPS1P27614 576 aa7.84□□□□□ -1.15
LDB18YLL049W DCD1P06773 312 aa7.83□□□□□ -1.16
LDB18YLL049W HOP09932 586 aa7.83□□□□□ -1.16
LDB18YLL049W MSB3P48566 633 aaPredicted RBP7.83□□□□□ -1.16
LDB18YLL049W YJL181WP46987 611 aa7.82□□□□□ -1.16
LDB18YLL049W TFC8Q12308 588 aa7.82□□□□□ -1.16
LDB18YLL049W YEF3P16521 1044 aaKnown RBP7.79□□□□□ -1.16
LDB18YLL049W RTC1Q08281 1341 aa7.78□□□□□ -1.16
LDB18YLL049W RSF2P46974 1380 aa7.78□□□□□ -1.16
LDB18YLL049W SSM4P40318 1319 aa7.77□□□□□ -1.17
LDB18YLL049W SNF2P22082 1703 aa7.76□□□□□ -1.17
LDB18YLL049W PRP40P33203 583 aaKnown RBP7.76□□□□□ -1.17
LDB18YLL049W IKI3Q06706 1349 aaKnown RBP7.76□□□□□ -1.17
LDB18YLL049W ADE6P38972 1358 aaKnown RBP7.75□□□□□ -1.17
LDB18YLL049W YKR075CP36155 307 aa7.75□□□□□ -1.17
LDB18YLL049W RCM1P53972 490 aa7.75□□□□□ -1.17
LDB18YLL049W LAM6Q08001 693 aa7.75□□□□□ -1.17
LDB18YLL049W TCB1Q12466 1186 aa7.74□□□□□ -1.17
LDB18YLL049W PPH3P32345 308 aa7.73□□□□□ -1.17
LDB18YLL049W COBP00163 385 aa7.72□□□□□ -1.17
LDB18YLL049W PAF1P38351 445 aa7.72□□□□□ -1.17
LDB18YLL049W SLM3Q12093 417 aa7.71□□□□□ -1.18
LDB18YLL049W YKL133CP36066 463 aa7.7□□□□□ -1.18
LDB18YLL049W SCY1P53009 804 aa7.7□□□□□ -1.18
LDB18YLL049W SSA4P22202 642 aaKnown RBP7.69□□□□□ -1.18
LDB18YLL049W NAP1P25293 417 aaKnown RBP7.69□□□□□ -1.18
LDB18YLL049W BDF1P35817 686 aa7.68□□□□□ -1.18
LDB18YLL049W EAF6P47128 113 aa7.68□□□□□ -1.18
LDB18YLL049W TAF8Q03750 510 aa7.68□□□□□ -1.18
LDB18YLL049W ALD3P54114 506 aa7.67□□□□□ -1.18
LDB18YLL049W SPT7P35177 1332 aa7.67□□□□□ -1.18
LDB18YLL049W YIL177CP40434 1758 aa7.66□□□□□ -1.18
LDB18YLL049W YJL225CP40889 1758 aa7.66□□□□□ -1.18
LDB18YLL049W YRF1-4O13559 1382 aa7.65□□□□□ -1.18
LDB18YLL049W DMA1P38823 416 aa7.65□□□□□ -1.18
LDB18YLL049W APC1P53886 1748 aa7.65□□□□□ -1.18
LDB18YLL049W TIF4632P39936 914 aaKnown RBP7.64□□□□□ -1.19
LDB18YLL049W PUS5Q06244 254 aa7.64□□□□□ -1.19
LDB18YLL049W PEX21P50091 288 aa7.63□□□□□ -1.19
LDB18YLL049W SLX5P32828 619 aaKnown RBP7.62□□□□□ -1.19
LDB18YLL049W TGL3P40308 642 aa7.62□□□□□ -1.19
LDB18YLL049W PRP43P53131 767 aaKnown RBP7.62□□□□□ -1.19
LDB18YLL049W XKS1P42826 600 aa7.61□□□□□ -1.19
LDB18YLL049W TOS1P38288 455 aa7.59□□□□□ -1.19
LDB18YLL049W ENP1P38333 483 aaKnown RBP7.59□□□□□ -1.19
LDB18YLL049W RIM15P43565 1770 aa7.59□□□□□ -1.2
LDB18YLL049W CTT1P06115 562 aa7.58□□□□□ -1.2
LDB18YLL049W SIS1P25294 352 aaKnown RBP7.58□□□□□ -1.2
LDB18YLL049W SAP155P43612 1002 aa7.58□□□□□ -1.2
LDB18YLL049W ESL2P36168 1195 aa7.57□□□□□ -1.2
LDB18YLL049W MHP1P43638 1398 aa7.57□□□□□ -1.2
LDB18YLL049W UBP9P39967 754 aa7.56□□□□□ -1.2
LDB18YLL049W MSB4Q12317 492 aa7.56□□□□□ -1.2
LDB18YLL049W YLR419WQ06698 1435 aaKnown RBP7.55□□□□□ -1.2
LDB18YLL049W BCH2P36122 765 aa7.55□□□□□ -1.2
LDB18YLL049W MSN5P52918 1224 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 80 ms