RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeastyeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAP1YKR039W RTG3P38165 486 aa12.98□□□□□ -0.33
GAP1YKR039W YMR196WQ04336 1088 aa12.98□□□□□ -0.33
GAP1YKR039W USO1P25386 1790 aa12.98□□□□□ -0.33
GAP1YKR039W PPH3P32345 308 aa12.95□□□□□ -0.34
GAP1YKR039W PSK1P31374 1356 aa12.94□□□□□ -0.34
GAP1YKR039W NST1P53935 1240 aa12.93□□□□□ -0.34
GAP1YKR039W MLP1Q02455 1875 aaKnown RBP12.93□□□□□ -0.34
GAP1YKR039W CPS1P27614 576 aa12.92□□□□□ -0.34
GAP1YKR039W YML133CQ03099 1374 aa12.9□□□□□ -0.34
GAP1YKR039W YLL067CQ07888 1374 aa12.9□□□□□ -0.34
GAP1YKR039W YLL066CQ99208 1374 aa12.9□□□□□ -0.34
GAP1YKR039W THI12P42883 340 aa12.88□□□□□ -0.35
GAP1YKR039W THI5P43534 340 aa12.88□□□□□ -0.35
GAP1YKR039W THI11P47183 340 aa12.88□□□□□ -0.35
GAP1YKR039W THI13Q07748 340 aa12.88□□□□□ -0.35
GAP1YKR039W LEU2P04173 364 aaPredicted RBP12.85□□□□□ -0.35
GAP1YKR039W MTR4P47047 1073 aaKnown RBP12.82□□□□□ -0.36
GAP1YKR039W YEF3P16521 1044 aaKnown RBP12.8□□□□□ -0.36
GAP1YKR039W TRK1P12685 1235 aa12.78□□□□□ -0.36
GAP1YKR039W PDI1P17967 522 aaKnown RBP12.77□□□□□ -0.37
GAP1YKR039W PRS1P32895 427 aaKnown RBP12.77□□□□□ -0.37
GAP1YKR039W TAP42Q04372 366 aa12.76□□□□□ -0.37
GAP1YKR039W ADE6P38972 1358 aaKnown RBP12.76□□□□□ -0.37
GAP1YKR039W RTF1P53064 558 aa12.74□□□□□ -0.37
GAP1YKR039W PRP43P53131 767 aaKnown RBP12.74□□□□□ -0.37
GAP1YKR039W IOC4Q04213 475 aa12.74□□□□□ -0.37
GAP1YKR039W KAR2P16474 682 aaKnown RBP12.73□□□□□ -0.37
GAP1YKR039W CSE4P36012 229 aa12.73□□□□□ -0.37
GAP1YKR039W RPS24AP0CX31 135 aaKnown RBP12.72□□□□□ -0.37
GAP1YKR039W RPS24BP0CX32 135 aaKnown RBP12.72□□□□□ -0.37
GAP1YKR039W GRX4P32642 244 aa12.71□□□□□ -0.38
GAP1YKR039W HIM1Q06674 414 aa12.69□□□□□ -0.38
GAP1YKR039W AUS1Q08409 1394 aa12.68□□□□□ -0.38
GAP1YKR039W RPP0P05317 312 aaKnown RBP12.67□□□□□ -0.38
GAP1YKR039W GAS4Q08271 471 aa12.66□□□□□ -0.38
GAP1YKR039W YFR006WP43590 535 aa12.65□□□□□ -0.39
GAP1YKR039W PAP2P53632 584 aaKnown RBP12.65□□□□□ -0.39
GAP1YKR039W YDL144CQ07589 356 aa12.65□□□□□ -0.39
GAP1YKR039W RRP46P53256 223 aaPredicted RBP12.63□□□□□ -0.39
GAP1YKR039W DPS1P04802 557 aaKnown RBP12.62□□□□□ -0.39
GAP1YKR039W PTP3P40048 928 aa12.62□□□□□ -0.39
GAP1YKR039W VPS27P40343 622 aaKnown RBP12.62□□□□□ -0.39
GAP1YKR039W RTR1P40084 226 aaPredicted RBP12.61□□□□□ -0.39
GAP1YKR039W CDC45Q08032 650 aa12.61□□□□□ -0.39
GAP1YKR039W TY4B-HP0C2J7 1802 aa12.61□□□□□ -0.39
GAP1YKR039W TY4B-JP47024 1803 aa12.61□□□□□ -0.39
GAP1YKR039W PRP45P28004 379 aaPredicted RBP12.6□□□□□ -0.39
GAP1YKR039W PRP5P21372 849 aaPredicted RBP12.59□□□□□ -0.39
GAP1YKR039W MPP10P47083 593 aaKnown RBP12.59□□□□□ -0.39
GAP1YKR039W SNF2P22082 1703 aa12.58□□□□□ -0.39
GAP1YKR039W RPO41P13433 1351 aaKnown RBP12.57□□□□□ -0.4
GAP1YKR039W PRD1P25375 712 aa12.54□□□□□ -0.4
GAP1YKR039W RVB2Q12464 471 aaKnown RBP12.53□□□□□ -0.4
GAP1YKR039W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
GAP1YKR039W SLM3Q12093 417 aa12.52□□□□□ -0.41
GAP1YKR039W SUI2P20459 304 aaKnown RBP12.51□□□□□ -0.41
GAP1YKR039W NOP2P40991 618 aaKnown RBP12.51□□□□□ -0.41
GAP1YKR039W MSB3P48566 633 aaPredicted RBP12.51□□□□□ -0.41
GAP1YKR039W YRB30P53107 440 aaPredicted RBP12.5□□□□□ -0.41
GAP1YKR039W AKL1P38080 1108 aaKnown RBP12.49□□□□□ -0.41
GAP1YKR039W THI22Q06490 572 aa12.49□□□□□ -0.41
GAP1YKR039W RRP5Q05022 1729 aaKnown RBP12.49□□□□□ -0.41
GAP1YKR039W YRF1-2P40105 1681 aa12.49□□□□□ -0.41
GAP1YKR039W SAP155P43612 1002 aa12.48□□□□□ -0.41
GAP1YKR039W TCB1Q12466 1186 aa12.47□□□□□ -0.41
GAP1YKR039W DSD1P53095 428 aa12.46□□□□□ -0.41
GAP1YKR039W YIL177CP40434 1758 aa12.46□□□□□ -0.41
GAP1YKR039W YJL225CP40889 1758 aa12.46□□□□□ -0.41
GAP1YKR039W TPD3P31383 635 aa12.46□□□□□ -0.42
GAP1YKR039W REB1P21538 810 aa12.44□□□□□ -0.42
GAP1YKR039W ENT1Q12518 454 aa12.44□□□□□ -0.42
GAP1YKR039W FUN12P39730 1002 aaKnown RBP12.44□□□□□ -0.42
GAP1YKR039W APC1P53886 1748 aa12.43□□□□□ -0.42
GAP1YKR039W HEF3P53978 1044 aaKnown RBP12.43□□□□□ -0.42
GAP1YKR039W YRF1-4O13559 1382 aa12.43□□□□□ -0.42
GAP1YKR039W XKS1P42826 600 aa12.42□□□□□ -0.42
GAP1YKR039W RTT109Q07794 436 aa12.42□□□□□ -0.42
GAP1YKR039W HSP104P31539 908 aaKnown RBP12.41□□□□□ -0.42
GAP1YKR039W NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.4□□□□□ -0.42not detected
GAP1YKR039W YAH1Q12184 172 aaKnown RBP12.4□□□□□ -0.42
GAP1YKR039W FKS3Q04952 1785 aa12.4□□□□□ -0.42
GAP1YKR039W URB1P34241 1764 aaKnown RBP12.4□□□□□ -0.43
GAP1YKR039W YNL050CP53952 270 aa12.39□□□□□ -0.43
GAP1YKR039W NTH2P35172 780 aa12.39□□□□□ -0.43
GAP1YKR039W APP1P53933 587 aa12.39□□□□□ -0.43
GAP1YKR039W CTF4Q01454 927 aa12.39□□□□□ -0.43
GAP1YKR039W RSF2P46974 1380 aa12.39□□□□□ -0.43
GAP1YKR039W RCR1P38212 213 aa12.38□□□□□ -0.43
GAP1YKR039W ENV9Q08651 330 aa12.38□□□□□ -0.43
GAP1YKR039W AOS1Q06624 347 aa12.37□□□□□ -0.43
GAP1YKR039W ZDS1P50111 915 aaKnown RBP12.35□□□□□ -0.43
GAP1YKR039W SIR4P11978 1358 aa12.34□□□□□ -0.43
GAP1YKR039W MAM1P40065 302 aa12.34□□□□□ -0.43
GAP1YKR039W RAD2P07276 1031 aa12.33□□□□□ -0.44
GAP1YKR039W IES2P40154 320 aa12.33□□□□□ -0.44
GAP1YKR039W GYP7P48365 746 aa12.33□□□□□ -0.44
GAP1YKR039W RRT14P40470 206 aa12.32□□□□□ -0.44
GAP1YKR039W MAK21Q12176 1025 aaKnown RBP12.32□□□□□ -0.44
GAP1YKR039W FPR3P38911 411 aaKnown RBP12.31□□□□□ -0.44
GAP1YKR039W YIL092WP40497 633 aa12.3□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms