RNA–Protein interactions for RNA: YKL038W

RGT1, Transcript of Glucose-responsive transcription factor, yeastyeast

Gene RGT1, Length 3,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGT1YKL038W YLR271WQ06152 274 aa6.53□□□□□ -1.36
RGT1YKL038W SPC110P32380 944 aa6.52□□□□□ -1.37
RGT1YKL038W NMD2P38798 1089 aaKnown RBP6.52□□□□□ -1.37
RGT1YKL038W DRS2P39524 1355 aa6.52□□□□□ -1.37
RGT1YKL038W RIX1P38883 763 aaPredicted RBP6.51□□□□□ -1.37
RGT1YKL038W ABP1P15891 592 aaKnown RBP6.51□□□□□ -1.37
RGT1YKL038W IFH1P39520 1085 aa6.51□□□□□ -1.37
RGT1YKL038W REB1P21538 810 aa6.5□□□□□ -1.37
RGT1YKL038W DSN1P40568 576 aa6.5□□□□□ -1.37
RGT1YKL038W GRX3Q03835 250 aa6.5□□□□□ -1.37
RGT1YKL038W SPB4P25808 606 aaPredicted RBP6.49□□□□□ -1.37
RGT1YKL038W IQG1Q12280 1495 aa6.49□□□□□ -1.37
RGT1YKL038W MSH3P25336 1018 aa6.49□□□□□ -1.37
RGT1YKL038W SMC3P47037 1230 aa6.48□□□□□ -1.37
RGT1YKL038W PDR10P51533 1564 aa6.48□□□□□ -1.37
RGT1YKL038W MMS1Q06211 1407 aa6.47□□□□□ -1.37
RGT1YKL038W CAT8P39113 1433 aa6.47□□□□□ -1.37
RGT1YKL038W ARL1P38116 183 aaKnown RBP6.46□□□□□ -1.37
RGT1YKL038W PAP2P53632 584 aaKnown RBP6.46□□□□□ -1.38
RGT1YKL038W TY3B-GQ99315 1547 aa6.46□□□□□ -1.38
RGT1YKL038W MSH4P40965 878 aaPredicted RBP6.45□□□□□ -1.38
RGT1YKL038W ARO1P08566 1588 aaKnown RBP6.45□□□□□ -1.38
RGT1YKL038W PCT1P13259 424 aa6.45□□□□□ -1.38
RGT1YKL038W YKR023WP36119 530 aaKnown RBP6.45□□□□□ -1.38
RGT1YKL038W YNL011CP53980 444 aa6.45□□□□□ -1.38
RGT1YKL038W ETT1Q08421 412 aaKnown RBP6.45□□□□□ -1.38
RGT1YKL038W KIP3P53086 805 aaKnown RBP6.44□□□□□ -1.38
RGT1YKL038W NNF2P53253 936 aa6.43□□□□□ -1.38
RGT1YKL038W PRP3Q03338 469 aaPredicted RBP6.43□□□□□ -1.38
RGT1YKL038W YOR093CQ12275 1648 aa6.43□□□□□ -1.38
RGT1YKL038W CLB1P24868 471 aa6.42□□□□□ -1.38
RGT1YKL038W TPM2P40414 161 aa6.42□□□□□ -1.38
RGT1YKL038W ECM16Q04217 1267 aaKnown RBP6.42□□□□□ -1.38
RGT1YKL038W KNS1P32350 737 aaPredicted RBP6.42□□□□□ -1.38
RGT1YKL038W VPS24P36095 224 aaKnown RBP6.42□□□□□ -1.38
RGT1YKL038W SEC7P11075 2009 aaKnown RBP6.41□□□□□ -1.38
RGT1YKL038W RAD2P07276 1031 aa6.41□□□□□ -1.38
RGT1YKL038W HSP82P02829 709 aaKnown RBP6.41□□□□□ -1.38
RGT1YKL038W RPN7Q06103 429 aaKnown RBP6.41□□□□□ -1.38
RGT1YKL038W MSP1P28737 362 aa6.41□□□□□ -1.38
RGT1YKL038W SRB8P25648 1427 aa6.4□□□□□ -1.38
RGT1YKL038W MDG1P53885 366 aa6.4□□□□□ -1.38
RGT1YKL038W MET10P39692 1035 aa6.4□□□□□ -1.39
RGT1YKL038W ITT1Q04638 464 aa6.4□□□□□ -1.39
RGT1YKL038W HAP1P0CE41 1502 aa6.4□□□□□ -1.39
RGT1YKL038W NOT3P06102 836 aaKnown RBP6.39□□□□□ -1.39
RGT1YKL038W DEP1P31385 405 aa6.39□□□□□ -1.39
RGT1YKL038W SIC1P38634 284 aa6.39□□□□□ -1.39
RGT1YKL038W RPN1P38764 993 aaKnown RBP6.38□□□□□ -1.39
RGT1YKL038W UTP13Q05946 817 aaKnown RBP6.38□□□□□ -1.39
RGT1YKL038W RVB2Q12464 471 aaKnown RBP6.38□□□□□ -1.39
RGT1YKL038W LTV1P34078 463 aa6.38□□□□□ -1.39
RGT1YKL038W ESC2Q06340 456 aa6.38□□□□□ -1.39
RGT1YKL038W BMS1Q08965 1183 aaKnown RBP6.38□□□□□ -1.39
RGT1YKL038W DNF3Q12674 1656 aa6.38□□□□□ -1.39
RGT1YKL038W YGL081WP53156 320 aa6.37□□□□□ -1.39
RGT1YKL038W NUP157P40064 1391 aaKnown RBP6.37□□□□□ -1.39
RGT1YKL038W NST1P53935 1240 aa6.37□□□□□ -1.39
RGT1YKL038W GEA1P47102 1408 aaPredicted RBP6.37□□□□□ -1.39
RGT1YKL038W PIL1P53252 339 aaKnown RBP6.36□□□□□ -1.39
RGT1YKL038W MIF2P35201 549 aa6.35□□□□□ -1.39
RGT1YKL038W MED8P38304 223 aa6.35□□□□□ -1.39
RGT1YKL038W RSC1P53236 928 aa6.35□□□□□ -1.39
RGT1YKL038W ECM1P39715 212 aa6.35□□□□□ -1.39
RGT1YKL038W MGA2P40578 1113 aa6.35□□□□□ -1.39
RGT1YKL038W CST9Q06032 482 aa6.35□□□□□ -1.39
RGT1YKL038W CBF5P33322 483 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
RGT1YKL038W IOC4Q04213 475 aa6.34□□□□□ -1.39
RGT1YKL038W PDS5Q04264 1277 aa6.34□□□□□ -1.39
RGT1YKL038W YAH1Q12184 172 aaKnown RBP6.34□□□□□ -1.39
RGT1YKL038W YIR014WP40570 242 aa6.34□□□□□ -1.39
RGT1YKL038W MFT1P33441 392 aaKnown RBP6.33□□□□□ -1.4
RGT1YKL038W GDT1P38301 280 aaPredicted RBP6.33□□□□□ -1.4
RGT1YKL038W TEA1P47988 759 aa6.32□□□□□ -1.4
RGT1YKL038W VPS4P52917 437 aa6.32□□□□□ -1.4
RGT1YKL038W AAD16Q02895 342 aa6.32□□□□□ -1.4
RGT1YKL038W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
RGT1YKL038W VPS60Q03390 229 aa6.31□□□□□ -1.4
RGT1YKL038W PSE1P32337 1089 aaKnown RBP6.31□□□□□ -1.4
RGT1YKL038W CDC45Q08032 650 aa6.31□□□□□ -1.4
RGT1YKL038W MCM2P29469 868 aa6.3□□□□□ -1.4
RGT1YKL038W ARP5P53946 755 aa6.3□□□□□ -1.4
RGT1YKL038W LCD1Q04377 747 aa6.3□□□□□ -1.4
RGT1YKL038W BDP1P46678 594 aa6.3□□□□□ -1.4
RGT1YKL038W HOS3Q02959 697 aaKnown RBP6.3□□□□□ -1.4
RGT1YKL038W SFI1Q12369 946 aa6.3□□□□□ -1.4
RGT1YKL038W NOP14Q99207 810 aaKnown RBP6.3□□□□□ -1.4
RGT1YKL038W YLR419WQ06698 1435 aaKnown RBP6.3□□□□□ -1.4
RGT1YKL038W RRP14P36080 434 aaKnown RBP6.3□□□□□ -1.4
RGT1YKL038W VPS27P40343 622 aaKnown RBP6.3□□□□□ -1.4
RGT1YKL038W YSH1Q06224 779 aaPredicted RBP6.3□□□□□ -1.4
RGT1YKL038W PLP2Q12017 286 aa6.3□□□□□ -1.4
RGT1YKL038W NOP7P53261 605 aaKnown RBP6.29□□□□□ -1.4
RGT1YKL038W EDE1P34216 1381 aa6.29□□□□□ -1.4
RGT1YKL038W SAP190P36123 1033 aa6.29□□□□□ -1.4
RGT1YKL038W RNT1Q02555 471 aa6.29□□□□□ -1.4
RGT1YKL038W MHP1P43638 1398 aa6.29□□□□□ -1.4
RGT1YKL038W YSP2Q06681 1438 aa6.28□□□□□ -1.4
RGT1YKL038W UBP10P53874 792 aaPredicted RBP6.28□□□□□ -1.4
RGT1YKL038W NUP188P52593 1655 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms