RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC16YKL022C TRL1P09880 827 aaKnown RBP8.63□□□□□ -1.03
CDC16YKL022C SCJ1P25303 377 aa8.63□□□□□ -1.03
CDC16YKL022C YHL050CP38721 697 aa8.63□□□□□ -1.03
CDC16YKL022C YHR219WP38900 624 aa8.63□□□□□ -1.03
CDC16YKL022C YEL077CQ3E7X8 1277 aa8.63□□□□□ -1.03
CDC16YKL022C RGR1P19263 1082 aa8.63□□□□□ -1.03
CDC16YKL022C SUB1P54000 292 aaKnown RBP8.63□□□□□ -1.03
CDC16YKL022C YOL098CQ12496 1037 aa8.63□□□□□ -1.03
CDC16YKL022C STB3Q12427 513 aa8.62□□□□□ -1.03
CDC16YKL022C YJU3P28321 313 aa8.62□□□□□ -1.03
CDC16YKL022C PEP12P32854 288 aa8.62□□□□□ -1.03
CDC16YKL022C ECM23Q02710 187 aa8.61□□□□□ -1.03
CDC16YKL022C UBX5Q06682 500 aa8.61□□□□□ -1.03
CDC16YKL022C MMP1Q12372 583 aa8.61□□□□□ -1.03
CDC16YKL022C SEC8P32855 1065 aa8.61□□□□□ -1.03
CDC16YKL022C OYE2Q03558 400 aaKnown RBP8.61□□□□□ -1.03
CDC16YKL022C TPS3P38426 1054 aaKnown RBP8.6□□□□□ -1.03
CDC16YKL022C MDJ2P42834 146 aa8.6□□□□□ -1.03
CDC16YKL022C YGR273CP53329 174 aa8.6□□□□□ -1.03
CDC16YKL022C SPT5P27692 1063 aaKnown RBP8.59□□□□□ -1.03
CDC16YKL022C JIP5Q06214 492 aaPredicted RBP8.59□□□□□ -1.03
CDC16YKL022C PPX1P38698 397 aa8.58□□□□□ -1.04
CDC16YKL022C CLB5P30283 435 aa8.57□□□□□ -1.04
CDC16YKL022C VPS72Q03388 795 aa8.57□□□□□ -1.04
CDC16YKL022C YMR196WQ04336 1088 aa8.57□□□□□ -1.04
CDC16YKL022C KAR5Q04746 504 aa8.57□□□□□ -1.04
CDC16YKL022C YOR238WQ08634 303 aa8.57□□□□□ -1.04
CDC16YKL022C ARG8P18544 423 aa8.56□□□□□ -1.04
CDC16YKL022C RDS2P19541 446 aaKnown RBP8.56□□□□□ -1.04
CDC16YKL022C TOM20P35180 183 aa8.56□□□□□ -1.04
CDC16YKL022C OSW7P43611 510 aa8.56□□□□□ -1.04
CDC16YKL022C MAK16P10962 306 aaPredicted RBP8.56□□□□□ -1.04
CDC16YKL022C GRS1P38088 690 aaKnown RBP8.56□□□□□ -1.04
CDC16YKL022C ATH1P48016 1211 aa8.56□□□□□ -1.04
CDC16YKL022C TPO2P53283 614 aa8.56□□□□□ -1.04
CDC16YKL022C MVP1P40959 511 aaKnown RBP8.55□□□□□ -1.04
CDC16YKL022C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
CDC16YKL022C GUT1P32190 709 aa8.55□□□□□ -1.04
CDC16YKL022C PPG1P32838 368 aa8.54□□□□□ -1.04
CDC16YKL022C SOL3P38858 249 aa8.54□□□□□ -1.04
CDC16YKL022C KTR7P40504 517 aa8.54□□□□□ -1.04
CDC16YKL022C CWC15Q03772 175 aaKnown RBP8.54□□□□□ -1.04
CDC16YKL022C UBX7P38349 436 aa8.53□□□□□ -1.04
CDC16YKL022C PRY3P47033 881 aa8.53□□□□□ -1.04
CDC16YKL022C RSC30P38781 883 aa8.53□□□□□ -1.04
CDC16YKL022C THI12P42883 340 aa8.52□□□□□ -1.04
CDC16YKL022C THI5P43534 340 aa8.52□□□□□ -1.04
CDC16YKL022C YJR107WP47145 328 aa8.52□□□□□ -1.04
CDC16YKL022C THI11P47183 340 aa8.52□□□□□ -1.04
CDC16YKL022C THI13Q07748 340 aa8.52□□□□□ -1.04
CDC16YKL022C BUD21Q08492 214 aaPredicted RBP8.52□□□□□ -1.04
CDC16YKL022C CIT2P08679 460 aa8.52□□□□□ -1.05
CDC16YKL022C IOC3P43596 787 aa8.52□□□□□ -1.05
CDC16YKL022C GRE2Q12068 342 aaKnown RBP8.52□□□□□ -1.05
CDC16YKL022C TSR4P25040 408 aa8.51□□□□□ -1.05
CDC16YKL022C RRP14P36080 434 aaKnown RBP8.51□□□□□ -1.05
CDC16YKL022C VAC8P39968 578 aa8.51□□□□□ -1.05
CDC16YKL022C MET1P36150 593 aa8.5□□□□□ -1.05
CDC16YKL022C FPR3P38911 411 aaKnown RBP8.5□□□□□ -1.05
CDC16YKL022C GAL2P13181 574 aa8.5□□□□□ -1.05
CDC16YKL022C ALG12P53730 551 aa8.5□□□□□ -1.05
CDC16YKL022C ALD3P54114 506 aa8.5□□□□□ -1.05
CDC16YKL022C HAA1Q12753 694 aaKnown RBP8.49□□□□□ -1.05
CDC16YKL022C VMA1P17255 1071 aaKnown RBP8.48□□□□□ -1.05
CDC16YKL022C SIT4P20604 311 aa8.48□□□□□ -1.05
CDC16YKL022C SRP40P32583 406 aaPredicted RBP8.48□□□□□ -1.05
CDC16YKL022C GAP1P19145 602 aaPredicted RBP8.48□□□□□ -1.05
CDC16YKL022C PDR1P12383 1068 aa8.47□□□□□ -1.05
CDC16YKL022C MNL2Q12205 849 aa8.47□□□□□ -1.05
CDC16YKL022C GIN4Q12263 1142 aa8.47□□□□□ -1.05
CDC16YKL022C BOL3P39724 118 aa8.46□□□□□ -1.05
CDC16YKL022C ATG1P53104 897 aa8.46□□□□□ -1.05
CDC16YKL022C MGE1P38523 228 aa8.46□□□□□ -1.06
CDC16YKL022C YPP1P46951 817 aa8.46□□□□□ -1.06
CDC16YKL022C YKL091CP33324 310 aaKnown RBP8.45□□□□□ -1.06
CDC16YKL022C NUT2Q06213 157 aa8.45□□□□□ -1.06
CDC16YKL022C FRT1Q99332 602 aa8.45□□□□□ -1.06
CDC16YKL022C MET4P32389 672 aa8.45□□□□□ -1.06
CDC16YKL022C ALD6P54115 500 aaKnown RBP8.45□□□□□ -1.06
CDC16YKL022C YPR109WQ06104 294 aa8.45□□□□□ -1.06
CDC16YKL022C TFG1P41895 735 aaPredicted RBP8.44□□□□□ -1.06
CDC16YKL022C MAP2P38174 421 aaKnown RBP8.44□□□□□ -1.06
CDC16YKL022C PIB1Q06651 286 aa8.44□□□□□ -1.06
CDC16YKL022C FYV10P40492 516 aa8.43□□□□□ -1.06
CDC16YKL022C MCM16Q12262 181 aa8.43□□□□□ -1.06
CDC16YKL022C NST1P53935 1240 aa8.42□□□□□ -1.06
CDC16YKL022C SSB1P11484 613 aaKnown RBP8.41□□□□□ -1.06
CDC16YKL022C SSB2P40150 613 aaKnown RBP8.41□□□□□ -1.06
CDC16YKL022C PNP1Q05788 311 aa8.41□□□□□ -1.06
CDC16YKL022C NAF1P53919 492 aaKnown RBP8.41□□□□□ -1.06
CDC16YKL022C PUF6Q04373 656 aaKnown RBP8.41□□□□□ -1.06
CDC16YKL022C RPN4Q03465 531 aa8.4□□□□□ -1.07
CDC16YKL022C NSE3Q05541 303 aa8.4□□□□□ -1.07
CDC16YKL022C PMC1P38929 1173 aaPredicted RBP8.39□□□□□ -1.07
CDC16YKL022C BUD6P41697 788 aa8.39□□□□□ -1.07
CDC16YKL022C GRX4P32642 244 aa8.39□□□□□ -1.07
CDC16YKL022C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
CDC16YKL022C VPS16Q03308 798 aa8.39□□□□□ -1.07
CDC16YKL022C ISF1P32488 338 aa8.38□□□□□ -1.07
CDC16YKL022C SSF2Q12153 453 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms