RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C PSK1P31374 1356 aa13.07□□□□□ -0.32
MET28YIR017C PTP3P40048 928 aa13.05□□□□□ -0.32
MET28YIR017C MHP1P43638 1398 aa13.03□□□□□ -0.32
MET28YIR017C LEU2P04173 364 aaPredicted RBP12.99□□□□□ -0.33
MET28YIR017C MTR4P47047 1073 aaKnown RBP12.97□□□□□ -0.33
MET28YIR017C PDS5Q04264 1277 aa12.97□□□□□ -0.33
MET28YIR017C YAH1Q12184 172 aaKnown RBP12.97□□□□□ -0.33
MET28YIR017C FKH1P40466 484 aa12.95□□□□□ -0.34
MET28YIR017C ADE6P38972 1358 aaKnown RBP12.93□□□□□ -0.34
MET28YIR017C PRP45P28004 379 aaPredicted RBP12.92□□□□□ -0.34
MET28YIR017C CSE4P36012 229 aa12.92□□□□□ -0.34
MET28YIR017C RTG3P38165 486 aa12.92□□□□□ -0.34
MET28YIR017C PRP43P53131 767 aaKnown RBP12.89□□□□□ -0.35
MET28YIR017C APP1P53933 587 aa12.89□□□□□ -0.35
MET28YIR017C ENT1Q12518 454 aa12.89□□□□□ -0.35
MET28YIR017C PRP5P21372 849 aaPredicted RBP12.88□□□□□ -0.35
MET28YIR017C REB1P21538 810 aa12.88□□□□□ -0.35
MET28YIR017C YML133CQ03099 1374 aa12.88□□□□□ -0.35
MET28YIR017C YLL067CQ07888 1374 aa12.88□□□□□ -0.35
MET28YIR017C YLL066CQ99208 1374 aa12.88□□□□□ -0.35
MET28YIR017C RPS24AP0CX31 135 aaKnown RBP12.87□□□□□ -0.35
MET28YIR017C RPS24BP0CX32 135 aaKnown RBP12.87□□□□□ -0.35
MET28YIR017C PDI1P17967 522 aaKnown RBP12.85□□□□□ -0.35
MET28YIR017C RTF1P53064 558 aa12.85□□□□□ -0.35
MET28YIR017C SEC3P33332 1336 aaKnown RBP12.85□□□□□ -0.35
MET28YIR017C ENV9Q08651 330 aa12.82□□□□□ -0.36
MET28YIR017C MLP1Q02455 1875 aaKnown RBP12.81□□□□□ -0.36
MET28YIR017C MSB3P48566 633 aaPredicted RBP12.79□□□□□ -0.36
MET28YIR017C RRP5Q05022 1729 aaKnown RBP12.79□□□□□ -0.36
MET28YIR017C GRX4P32642 244 aa12.78□□□□□ -0.36
MET28YIR017C TAP42Q04372 366 aa12.78□□□□□ -0.36
MET28YIR017C PSD2P53037 1138 aaKnown RBP12.77□□□□□ -0.37
MET28YIR017C TCB1Q12466 1186 aa12.77□□□□□ -0.37
MET28YIR017C TY4B-HP0C2J7 1802 aa12.76□□□□□ -0.37
MET28YIR017C TY4B-JP47024 1803 aa12.76□□□□□ -0.37
MET28YIR017C DPS1P04802 557 aaKnown RBP12.76□□□□□ -0.37
MET28YIR017C YIL055CP40523 627 aaKnown RBP12.76□□□□□ -0.37
MET28YIR017C IMH1Q06704 911 aaKnown RBP12.76□□□□□ -0.37
MET28YIR017C GAS4Q08271 471 aa12.76□□□□□ -0.37
MET28YIR017C SLM3Q12093 417 aa12.76□□□□□ -0.37
MET28YIR017C SPT7P35177 1332 aa12.73□□□□□ -0.37
MET28YIR017C KAR2P16474 682 aaKnown RBP12.73□□□□□ -0.37
MET28YIR017C LEU3P08638 886 aa12.71□□□□□ -0.37
MET28YIR017C ENP1P38333 483 aaKnown RBP12.7□□□□□ -0.38
MET28YIR017C HIM1Q06674 414 aa12.7□□□□□ -0.38
MET28YIR017C NST1P53935 1240 aa12.69□□□□□ -0.38
MET28YIR017C YEF3P16521 1044 aaKnown RBP12.67□□□□□ -0.38
MET28YIR017C IES2P40154 320 aa12.67□□□□□ -0.38
MET28YIR017C RSF2P46974 1380 aa12.67□□□□□ -0.38
MET28YIR017C AUS1Q08409 1394 aa12.67□□□□□ -0.38
MET28YIR017C XKS1P42826 600 aa12.66□□□□□ -0.38
MET28YIR017C TRK1P12685 1235 aa12.65□□□□□ -0.38
MET28YIR017C PAP2P53632 584 aaKnown RBP12.65□□□□□ -0.38
MET28YIR017C YRF1-2P40105 1681 aa12.64□□□□□ -0.39
MET28YIR017C GLN1P32288 370 aaKnown RBP12.61□□□□□ -0.39
MET28YIR017C RPO41P13433 1351 aaKnown RBP12.6□□□□□ -0.39
MET28YIR017C YMR074CQ04773 145 aa12.58□□□□□ -0.4
MET28YIR017C ROM2P51862 1356 aaKnown RBP12.57□□□□□ -0.4
MET28YIR017C YKL133CP36066 463 aa12.57□□□□□ -0.4
MET28YIR017C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.57□□□□□ -0.4not detected
MET28YIR017C IOC4Q04213 475 aa12.57□□□□□ -0.4
MET28YIR017C MEC3Q02574 474 aa12.56□□□□□ -0.4
MET28YIR017C RCR1P38212 213 aa12.55□□□□□ -0.4
MET28YIR017C DOT5P40553 215 aa12.54□□□□□ -0.4
MET28YIR017C SIR4P11978 1358 aa12.54□□□□□ -0.4
MET28YIR017C YIL177CP40434 1758 aa12.53□□□□□ -0.4
MET28YIR017C YJL225CP40889 1758 aa12.53□□□□□ -0.4
MET28YIR017C FKS3Q04952 1785 aa12.53□□□□□ -0.4
MET28YIR017C AKL1P38080 1108 aaKnown RBP12.52□□□□□ -0.41
MET28YIR017C DSD1P53095 428 aa12.52□□□□□ -0.41
MET28YIR017C APC1P53886 1748 aa12.51□□□□□ -0.41
MET28YIR017C URB1P34241 1764 aaKnown RBP12.51□□□□□ -0.41
MET28YIR017C HSP104P31539 908 aaKnown RBP12.5□□□□□ -0.41
MET28YIR017C RTR1P40084 226 aaPredicted RBP12.5□□□□□ -0.41
MET28YIR017C CTF4Q01454 927 aa12.5□□□□□ -0.41
MET28YIR017C YJL181WP46987 611 aa12.49□□□□□ -0.41
MET28YIR017C FAP1P53971 965 aa12.49□□□□□ -0.41
MET28YIR017C FOX2Q02207 900 aaKnown RBP12.49□□□□□ -0.41
MET28YIR017C LAM6Q08001 693 aa12.49□□□□□ -0.41
MET28YIR017C RRP46P53256 223 aaPredicted RBP12.48□□□□□ -0.41
MET28YIR017C UBP1P25037 809 aa12.47□□□□□ -0.41
MET28YIR017C RPN11P43588 306 aaKnown RBP12.47□□□□□ -0.41
MET28YIR017C YRF1-4O13559 1382 aa12.46□□□□□ -0.41
MET28YIR017C COBP00163 385 aa12.46□□□□□ -0.41
MET28YIR017C ADE16P54113 591 aaKnown RBP12.46□□□□□ -0.41
MET28YIR017C PRP40P33203 583 aaKnown RBP12.45□□□□□ -0.42
MET28YIR017C FRK1Q03002 865 aaPredicted RBP12.45□□□□□ -0.42
MET28YIR017C AOS1Q06624 347 aa12.45□□□□□ -0.42
MET28YIR017C ATG13Q06628 738 aa12.45□□□□□ -0.42
MET28YIR017C EDE1P34216 1381 aa12.44□□□□□ -0.42
MET28YIR017C YRF1-3P0CX14 1859 aa12.43□□□□□ -0.42
MET28YIR017C YRF1-7P0CX15 1859 aa12.43□□□□□ -0.42
MET28YIR017C YRF1-6P53819 1859 aa12.43□□□□□ -0.42
MET28YIR017C BUD31P25337 157 aaPredicted RBP12.43□□□□□ -0.42
MET28YIR017C PRD1P25375 712 aa12.43□□□□□ -0.42
MET28YIR017C YDL144CQ07589 356 aa12.43□□□□□ -0.42
MET28YIR017C INP54Q08227 384 aaKnown RBP12.43□□□□□ -0.42
MET28YIR017C PRI1P10363 409 aa12.42□□□□□ -0.42
MET28YIR017C NTH2P35172 780 aa12.41□□□□□ -0.42
MET28YIR017C RPP0P05317 312 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms