RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C RRP5Q05022 1729 aaKnown RBP12.19□□□□□ -0.46
SOD2YHR008C RAD9P14737 1309 aa12.18□□□□□ -0.46
SOD2YHR008C RAV1P47104 1357 aa12.17□□□□□ -0.46
SOD2YHR008C RRD1P40454 393 aaKnown RBP12.15□□□□□ -0.46
SOD2YHR008C TAF5P38129 798 aa12.14□□□□□ -0.47
SOD2YHR008C ALD2P47771 506 aa12.13□□□□□ -0.47
SOD2YHR008C DOT5P40553 215 aa12.12□□□□□ -0.47
SOD2YHR008C SSA2P10592 639 aaKnown RBP12.1□□□□□ -0.47
SOD2YHR008C IKI3Q06706 1349 aaKnown RBP12.1□□□□□ -0.47
SOD2YHR008C PRP5P21372 849 aaPredicted RBP12.09□□□□□ -0.47
SOD2YHR008C LYS4P49367 693 aaPredicted RBP12.09□□□□□ -0.47
SOD2YHR008C NPR2P39923 615 aa12.08□□□□□ -0.48
SOD2YHR008C CPS1P27614 576 aa12.07□□□□□ -0.48
SOD2YHR008C PSK1P31374 1356 aa12.06□□□□□ -0.48
SOD2YHR008C RTC1Q08281 1341 aa12.05□□□□□ -0.48
SOD2YHR008C ROM2P51862 1356 aaKnown RBP12.05□□□□□ -0.48
SOD2YHR008C PAF1P38351 445 aa12.04□□□□□ -0.48
SOD2YHR008C IES2P40154 320 aa12.04□□□□□ -0.48
SOD2YHR008C YJL181WP46987 611 aa12.04□□□□□ -0.48
SOD2YHR008C FOX2Q02207 900 aaKnown RBP12.02□□□□□ -0.49
SOD2YHR008C CTH1P47976 325 aa12.01□□□□□ -0.49
SOD2YHR008C SSM4P40318 1319 aa12.01□□□□□ -0.49
SOD2YHR008C YEF3P16521 1044 aaKnown RBP12□□□□□ -0.49
SOD2YHR008C NAP1P25293 417 aaKnown RBP12□□□□□ -0.49
SOD2YHR008C MSB3P48566 633 aaPredicted RBP12□□□□□ -0.49
SOD2YHR008C BFR2Q06631 534 aaKnown RBP11.97□□□□□ -0.49
SOD2YHR008C PRP40P33203 583 aaKnown RBP11.96□□□□□ -0.49
SOD2YHR008C URB1P34241 1764 aaKnown RBP11.95□□□□□ -0.5
SOD2YHR008C RCM1P53972 490 aa11.95□□□□□ -0.5
SOD2YHR008C LAM6Q08001 693 aa11.95□□□□□ -0.5
SOD2YHR008C RSF2P46974 1380 aa11.93□□□□□ -0.5
SOD2YHR008C TCB1Q12466 1186 aa11.93□□□□□ -0.5
SOD2YHR008C ADE6P38972 1358 aaKnown RBP11.92□□□□□ -0.5
SOD2YHR008C PPH3P32345 308 aa11.88□□□□□ -0.51
SOD2YHR008C TAF8Q03750 510 aa11.87□□□□□ -0.51
SOD2YHR008C YKR075CP36155 307 aa11.84□□□□□ -0.51
SOD2YHR008C SLM3Q12093 417 aa11.84□□□□□ -0.51
SOD2YHR008C SPT7P35177 1332 aa11.84□□□□□ -0.51
SOD2YHR008C TY4B-HP0C2J7 1802 aa11.83□□□□□ -0.51
SOD2YHR008C TY4B-JP47024 1803 aa11.83□□□□□ -0.51
SOD2YHR008C COBP00163 385 aa11.83□□□□□ -0.52
SOD2YHR008C YKL133CP36066 463 aa11.83□□□□□ -0.52
SOD2YHR008C BDF1P35817 686 aa11.8□□□□□ -0.52
SOD2YHR008C RPG1P38249 964 aaKnown RBP11.8□□□□□ -0.52
SOD2YHR008C FKS3Q04952 1785 aa11.78□□□□□ -0.52
SOD2YHR008C ALD3P54114 506 aa11.78□□□□□ -0.52
SOD2YHR008C ESL2P36168 1195 aa11.77□□□□□ -0.53
SOD2YHR008C ENP1P38333 483 aaKnown RBP11.77□□□□□ -0.53
SOD2YHR008C PRP43P53131 767 aaKnown RBP11.74□□□□□ -0.53
SOD2YHR008C YRF1-4O13559 1382 aa11.73□□□□□ -0.53
SOD2YHR008C NOP7P53261 605 aaKnown RBP11.73□□□□□ -0.53
SOD2YHR008C XKS1P42826 600 aa11.7□□□□□ -0.54
SOD2YHR008C EAF6P47128 113 aa11.7□□□□□ -0.54
SOD2YHR008C YRF1-3P0CX14 1859 aa11.7□□□□□ -0.54
SOD2YHR008C YRF1-7P0CX15 1859 aa11.7□□□□□ -0.54
SOD2YHR008C YRF1-6P53819 1859 aa11.7□□□□□ -0.54
SOD2YHR008C SSA4P22202 642 aaKnown RBP11.67□□□□□ -0.54
SOD2YHR008C SAP155P43612 1002 aa11.66□□□□□ -0.54
SOD2YHR008C MTR4P47047 1073 aaKnown RBP11.66□□□□□ -0.54
SOD2YHR008C PEX21P50091 288 aa11.66□□□□□ -0.54
SOD2YHR008C LEU2P04173 364 aaPredicted RBP11.65□□□□□ -0.54
SOD2YHR008C CSE4P36012 229 aa11.65□□□□□ -0.54
SOD2YHR008C MSB4Q12317 492 aa11.65□□□□□ -0.54
SOD2YHR008C SNF2P22082 1703 aa11.65□□□□□ -0.54
SOD2YHR008C PUS5Q06244 254 aa11.63□□□□□ -0.55
SOD2YHR008C RPS24AP0CX31 135 aaKnown RBP11.62□□□□□ -0.55
SOD2YHR008C RPS24BP0CX32 135 aaKnown RBP11.62□□□□□ -0.55
SOD2YHR008C TOS1P38288 455 aa11.61□□□□□ -0.55
SOD2YHR008C MEC3Q02574 474 aa11.61□□□□□ -0.55
SOD2YHR008C CTT1P06115 562 aa11.6□□□□□ -0.55
SOD2YHR008C CHZ1P40019 153 aaPredicted RBP11.6□□□□□ -0.55
SOD2YHR008C FRK1Q03002 865 aaPredicted RBP11.6□□□□□ -0.55
SOD2YHR008C BUG1Q12191 341 aa11.6□□□□□ -0.55
SOD2YHR008C MSN5P52918 1224 aa11.58□□□□□ -0.56
SOD2YHR008C UTP22P53254 1237 aaPredicted RBP11.58□□□□□ -0.56
SOD2YHR008C YLR419WQ06698 1435 aaKnown RBP11.57□□□□□ -0.56
SOD2YHR008C SPE2P21182 396 aa11.56□□□□□ -0.56
SOD2YHR008C YER156CP40093 338 aaKnown RBP11.56□□□□□ -0.56
SOD2YHR008C SQS1P53866 767 aaKnown RBP11.56□□□□□ -0.56
SOD2YHR008C APC1P53886 1748 aa11.56□□□□□ -0.56
SOD2YHR008C MHP1P43638 1398 aa11.55□□□□□ -0.56
SOD2YHR008C RAD4P14736 754 aa11.54□□□□□ -0.56
SOD2YHR008C YKL222CP35995 705 aa11.53□□□□□ -0.56
SOD2YHR008C ADE16P54113 591 aaKnown RBP11.53□□□□□ -0.56
SOD2YHR008C SIR4P11978 1358 aa11.52□□□□□ -0.57
SOD2YHR008C KIN4Q01919 800 aa11.51□□□□□ -0.57
SOD2YHR008C GRE2Q12068 342 aaKnown RBP11.51□□□□□ -0.57
SOD2YHR008C ERT1P38140 529 aa11.5□□□□□ -0.57
SOD2YHR008C HPC2Q01448 625 aa11.5□□□□□ -0.57
SOD2YHR008C RCR1P38212 213 aa11.49□□□□□ -0.57
SOD2YHR008C RPO41P13433 1351 aaKnown RBP11.49□□□□□ -0.57
SOD2YHR008C RRT14P40470 206 aa11.47□□□□□ -0.57
SOD2YHR008C FPK1P53739 893 aa11.47□□□□□ -0.57
SOD2YHR008C KIP3P53086 805 aaKnown RBP11.46□□□□□ -0.57
SOD2YHR008C ATG13Q06628 738 aa11.46□□□□□ -0.57
SOD2YHR008C GRX1P25373 110 aaKnown RBP11.44□□□□□ -0.58
SOD2YHR008C CWH41P53008 833 aa11.44□□□□□ -0.58
SOD2YHR008C YIL177CP40434 1758 aa11.42□□□□□ -0.58
SOD2YHR008C YJL225CP40889 1758 aa11.42□□□□□ -0.58
SOD2YHR008C DUS1P53759 423 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms