RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeastyeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC2YGR244C SPT7P35177 1332 aa13.12□□□□□ -0.31
LSC2YGR244C LEU3P08638 886 aa13.11□□□□□ -0.31
LSC2YGR244C YFR006WP43590 535 aa13.09□□□□□ -0.31
LSC2YGR244C CPS1P27614 576 aa13.07□□□□□ -0.32
LSC2YGR244C RTG3P38165 486 aa13.07□□□□□ -0.32
LSC2YGR244C PSD2P53037 1138 aaKnown RBP13.07□□□□□ -0.32
LSC2YGR244C PPH3P32345 308 aa13.06□□□□□ -0.32
LSC2YGR244C PSK1P31374 1356 aa13.05□□□□□ -0.32
LSC2YGR244C FKH1P40466 484 aa13.04□□□□□ -0.32
LSC2YGR244C MLP1Q02455 1875 aaKnown RBP13.02□□□□□ -0.32
LSC2YGR244C ENP1P38333 483 aaKnown RBP13.02□□□□□ -0.33
LSC2YGR244C LEU2P04173 364 aaPredicted RBP13.01□□□□□ -0.33
LSC2YGR244C MTR4P47047 1073 aaKnown RBP12.98□□□□□ -0.33
LSC2YGR244C CSE4P36012 229 aa12.94□□□□□ -0.34
LSC2YGR244C RTF1P53064 558 aa12.94□□□□□ -0.34
LSC2YGR244C PDI1P17967 522 aaKnown RBP12.92□□□□□ -0.34
LSC2YGR244C NST1P53935 1240 aa12.91□□□□□ -0.34
LSC2YGR244C YML133CQ03099 1374 aa12.9□□□□□ -0.34
LSC2YGR244C YLL067CQ07888 1374 aa12.9□□□□□ -0.34
LSC2YGR244C YLL066CQ99208 1374 aa12.9□□□□□ -0.34
LSC2YGR244C RPS24AP0CX31 135 aaKnown RBP12.89□□□□□ -0.35
LSC2YGR244C RPS24BP0CX32 135 aaKnown RBP12.89□□□□□ -0.35
LSC2YGR244C KAR2P16474 682 aaKnown RBP12.88□□□□□ -0.35
LSC2YGR244C NSR1P27476 414 aaKnown RBP RIP-Chip data12.87□□□□□ -0.35not detected
LSC2YGR244C ADE6P38972 1358 aaKnown RBP12.85□□□□□ -0.35
LSC2YGR244C GRX4P32642 244 aa12.84□□□□□ -0.35
LSC2YGR244C TAP42Q04372 366 aa12.84□□□□□ -0.35
LSC2YGR244C PRP45P28004 379 aaPredicted RBP12.83□□□□□ -0.36
LSC2YGR244C PRP43P53131 767 aaKnown RBP12.83□□□□□ -0.36
LSC2YGR244C PAP2P53632 584 aaKnown RBP12.83□□□□□ -0.36
LSC2YGR244C GAS4Q08271 471 aa12.83□□□□□ -0.36
LSC2YGR244C PTP3P40048 928 aa12.82□□□□□ -0.36
LSC2YGR244C DPS1P04802 557 aaKnown RBP12.81□□□□□ -0.36
LSC2YGR244C TRK1P12685 1235 aa12.81□□□□□ -0.36
LSC2YGR244C YEF3P16521 1044 aaKnown RBP12.8□□□□□ -0.36
LSC2YGR244C PRP5P21372 849 aaPredicted RBP12.8□□□□□ -0.36
LSC2YGR244C HIM1Q06674 414 aa12.79□□□□□ -0.36
LSC2YGR244C TY4B-HP0C2J7 1802 aa12.75□□□□□ -0.37
LSC2YGR244C TY4B-JP47024 1803 aa12.75□□□□□ -0.37
LSC2YGR244C RTR1P40084 226 aaPredicted RBP12.72□□□□□ -0.37
LSC2YGR244C AUS1Q08409 1394 aa12.71□□□□□ -0.37
LSC2YGR244C ENT1Q12518 454 aa12.71□□□□□ -0.37
LSC2YGR244C MSB3P48566 633 aaPredicted RBP12.7□□□□□ -0.38
LSC2YGR244C IOC4Q04213 475 aa12.7□□□□□ -0.38
LSC2YGR244C TCB1Q12466 1186 aa12.7□□□□□ -0.38
LSC2YGR244C REB1P21538 810 aa12.69□□□□□ -0.38
LSC2YGR244C YDL144CQ07589 356 aa12.69□□□□□ -0.38
LSC2YGR244C SLM3Q12093 417 aa12.69□□□□□ -0.38
LSC2YGR244C RRP5Q05022 1729 aaKnown RBP12.68□□□□□ -0.38
LSC2YGR244C RPO41P13433 1351 aaKnown RBP12.68□□□□□ -0.38
LSC2YGR244C RPP0P05317 312 aaKnown RBP12.67□□□□□ -0.38
LSC2YGR244C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.67□□□□□ -0.38not detected
LSC2YGR244C APP1P53933 587 aa12.67□□□□□ -0.38
LSC2YGR244C YAH1Q12184 172 aaKnown RBP12.67□□□□□ -0.38
LSC2YGR244C PRS1P32895 427 aaKnown RBP12.66□□□□□ -0.38
LSC2YGR244C VPS27P40343 622 aaKnown RBP12.65□□□□□ -0.38
LSC2YGR244C MPP10P47083 593 aaKnown RBP12.64□□□□□ -0.39
LSC2YGR244C CDC45Q08032 650 aa12.64□□□□□ -0.39
LSC2YGR244C ENV9Q08651 330 aa12.64□□□□□ -0.39
LSC2YGR244C SNF2P22082 1703 aa12.64□□□□□ -0.39
LSC2YGR244C XKS1P42826 600 aa12.62□□□□□ -0.39
LSC2YGR244C RRP46P53256 223 aaPredicted RBP12.62□□□□□ -0.39
LSC2YGR244C AKL1P38080 1108 aaKnown RBP12.6□□□□□ -0.39
LSC2YGR244C YRF1-2P40105 1681 aa12.59□□□□□ -0.39
LSC2YGR244C PRD1P25375 712 aa12.59□□□□□ -0.39
LSC2YGR244C DSD1P53095 428 aa12.58□□□□□ -0.4
LSC2YGR244C HSP104P31539 908 aaKnown RBP12.57□□□□□ -0.4
LSC2YGR244C IES2P40154 320 aa12.57□□□□□ -0.4
LSC2YGR244C IMH1Q06704 911 aaKnown RBP12.57□□□□□ -0.4
LSC2YGR244C RSF2P46974 1380 aa12.56□□□□□ -0.4
LSC2YGR244C FKS3Q04952 1785 aa12.56□□□□□ -0.4
LSC2YGR244C TPD3P31383 635 aa12.54□□□□□ -0.4
LSC2YGR244C RVB2Q12464 471 aaKnown RBP12.54□□□□□ -0.4
LSC2YGR244C RCR1P38212 213 aa12.53□□□□□ -0.4
LSC2YGR244C SAP155P43612 1002 aa12.53□□□□□ -0.4
LSC2YGR244C MEC3Q02574 474 aa12.53□□□□□ -0.4
LSC2YGR244C URB1P34241 1764 aaKnown RBP12.53□□□□□ -0.4
LSC2YGR244C YIL177CP40434 1758 aa12.53□□□□□ -0.4
LSC2YGR244C YJL225CP40889 1758 aa12.53□□□□□ -0.4
LSC2YGR244C SUI2P20459 304 aaKnown RBP12.52□□□□□ -0.41
LSC2YGR244C CTF4Q01454 927 aa12.52□□□□□ -0.41
LSC2YGR244C THI22Q06490 572 aa12.52□□□□□ -0.41
LSC2YGR244C AOS1Q06624 347 aa12.52□□□□□ -0.41
LSC2YGR244C YRB30P53107 440 aaPredicted RBP12.51□□□□□ -0.41
LSC2YGR244C YKL133CP36066 463 aa12.49□□□□□ -0.41
LSC2YGR244C NTH2P35172 780 aa12.48□□□□□ -0.41
LSC2YGR244C ZDS1P50111 915 aaKnown RBP12.48□□□□□ -0.41
LSC2YGR244C YNL050CP53952 270 aa12.48□□□□□ -0.41
LSC2YGR244C SIR4P11978 1358 aa12.47□□□□□ -0.41
LSC2YGR244C YIL055CP40523 627 aaKnown RBP12.47□□□□□ -0.41
LSC2YGR244C RTT109Q07794 436 aa12.47□□□□□ -0.41
LSC2YGR244C APC1P53886 1748 aa12.47□□□□□ -0.41
LSC2YGR244C FUN12P39730 1002 aaKnown RBP12.46□□□□□ -0.41
LSC2YGR244C YRF1-4O13559 1382 aa12.45□□□□□ -0.42
LSC2YGR244C MAM1P40065 302 aa12.45□□□□□ -0.42
LSC2YGR244C ATG13Q06628 738 aa12.45□□□□□ -0.42
LSC2YGR244C ROM2P51862 1356 aaKnown RBP12.43□□□□□ -0.42
LSC2YGR244C TFA1P36100 482 aa12.43□□□□□ -0.42
LSC2YGR244C RRT14P40470 206 aa12.43□□□□□ -0.42
LSC2YGR244C GYP7P48365 746 aa12.43□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms