RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C MPP10P47083 593 aaKnown RBP12.22□□□□□ -0.45
PBP1YGR178C ESL2P36168 1195 aa12.21□□□□□ -0.45
PBP1YGR178C TRK1P12685 1235 aa12.2□□□□□ -0.46
PBP1YGR178C NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
PBP1YGR178C ITT1Q04638 464 aa12.2□□□□□ -0.46
PBP1YGR178C MLP1Q02455 1875 aaKnown RBP12.2□□□□□ -0.46
PBP1YGR178C DRS2P39524 1355 aa12.2□□□□□ -0.46
PBP1YGR178C ARL1P38116 183 aaKnown RBP12.19□□□□□ -0.46
PBP1YGR178C MET10P39692 1035 aa12.19□□□□□ -0.46
PBP1YGR178C QCR6P00127 147 aa12.18□□□□□ -0.46
PBP1YGR178C KNS1P32350 737 aaPredicted RBP12.18□□□□□ -0.46
PBP1YGR178C PDR11P40550 1411 aa12.17□□□□□ -0.46
PBP1YGR178C EDE1P34216 1381 aa12.17□□□□□ -0.46
PBP1YGR178C NOT3P06102 836 aaKnown RBP12.17□□□□□ -0.46
PBP1YGR178C YPP1P46951 817 aa12.16□□□□□ -0.46
PBP1YGR178C RAD2P07276 1031 aa12.16□□□□□ -0.46
PBP1YGR178C CHC1P22137 1653 aaKnown RBP12.15□□□□□ -0.46
PBP1YGR178C SNF2P22082 1703 aa12.15□□□□□ -0.46
PBP1YGR178C SPE2P21182 396 aa12.14□□□□□ -0.47
PBP1YGR178C RLF2Q12495 606 aa12.14□□□□□ -0.47
PBP1YGR178C YEF3P16521 1044 aaKnown RBP12.13□□□□□ -0.47
PBP1YGR178C DAL5P15365 543 aa12.12□□□□□ -0.47
PBP1YGR178C AVT3P36062 692 aa12.12□□□□□ -0.47
PBP1YGR178C NOP58Q12499 511 aaKnown RBP12.11□□□□□ -0.47
PBP1YGR178C IOC4Q04213 475 aa12.11□□□□□ -0.47
PBP1YGR178C SCT1P32784 759 aa12.09□□□□□ -0.47
PBP1YGR178C TEA1P47988 759 aa12.09□□□□□ -0.47
PBP1YGR178C NUP192P47054 1683 aa12.09□□□□□ -0.47
PBP1YGR178C TRM3Q07527 1436 aa12.09□□□□□ -0.47
PBP1YGR178C NAP1P25293 417 aaKnown RBP12.09□□□□□ -0.47
PBP1YGR178C POL32P47110 350 aa12.09□□□□□ -0.47
PBP1YGR178C SAP155P43612 1002 aa12.08□□□□□ -0.48
PBP1YGR178C LSP1Q12230 341 aaKnown RBP12.08□□□□□ -0.48
PBP1YGR178C YIL092WP40497 633 aa12.07□□□□□ -0.48
PBP1YGR178C YGR130CP53278 816 aa12.06□□□□□ -0.48
PBP1YGR178C BNR1P40450 1375 aa12.06□□□□□ -0.48
PBP1YGR178C VMR1P38735 1592 aa12.05□□□□□ -0.48
PBP1YGR178C FKH1P40466 484 aa12.05□□□□□ -0.48
PBP1YGR178C CHZ1P40019 153 aaPredicted RBP12.04□□□□□ -0.48
PBP1YGR178C HAP1P0CE41 1502 aa12.04□□□□□ -0.48
PBP1YGR178C RTR1P40084 226 aaPredicted RBP12.03□□□□□ -0.48
PBP1YGR178C RRP46P53256 223 aaPredicted RBP12.03□□□□□ -0.48
PBP1YGR178C TPD3P31383 635 aa12.02□□□□□ -0.48
PBP1YGR178C ITC1P53125 1264 aa12.02□□□□□ -0.48
PBP1YGR178C URN1Q06525 465 aaKnown RBP12.02□□□□□ -0.49
PBP1YGR178C IML1P47170 1584 aa12.01□□□□□ -0.49
PBP1YGR178C BUD27P43573 796 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
PBP1YGR178C PUF6Q04373 656 aaKnown RBP12.01□□□□□ -0.49
PBP1YGR178C YAP3P38749 330 aa11.99□□□□□ -0.49
PBP1YGR178C SEC7P11075 2009 aaKnown RBP11.98□□□□□ -0.49
PBP1YGR178C CSE4P36012 229 aa11.96□□□□□ -0.5
PBP1YGR178C RSC1P53236 928 aa11.96□□□□□ -0.5
PBP1YGR178C SRS2P12954 1174 aa11.95□□□□□ -0.5
PBP1YGR178C SPT21P35209 758 aa11.95□□□□□ -0.5
PBP1YGR178C TAF8Q03750 510 aa11.95□□□□□ -0.5
PBP1YGR178C LCD1Q04377 747 aa11.95□□□□□ -0.5
PBP1YGR178C THI22Q06490 572 aa11.95□□□□□ -0.5
PBP1YGR178C KRE5P22023 1365 aa11.94□□□□□ -0.5
PBP1YGR178C RAD26P40352 1085 aa11.92□□□□□ -0.5
PBP1YGR178C MDG1P53885 366 aa11.92□□□□□ -0.5
PBP1YGR178C COG8Q04632 607 aa11.92□□□□□ -0.5
PBP1YGR178C PRD1P25375 712 aa11.91□□□□□ -0.5
PBP1YGR178C HEF3P53978 1044 aaKnown RBP11.91□□□□□ -0.5
PBP1YGR178C HAP5Q02516 242 aa11.91□□□□□ -0.5
PBP1YGR178C TPM2P40414 161 aa11.89□□□□□ -0.51
PBP1YGR178C MCM2P29469 868 aa11.88□□□□□ -0.51
PBP1YGR178C RKM3P38222 552 aa11.88□□□□□ -0.51
PBP1YGR178C YGL081WP53156 320 aa11.88□□□□□ -0.51
PBP1YGR178C NUP188P52593 1655 aaKnown RBP11.86□□□□□ -0.51
PBP1YGR178C ESC2Q06340 456 aa11.86□□□□□ -0.51
PBP1YGR178C RTT109Q07794 436 aa11.86□□□□□ -0.51
PBP1YGR178C MAK21Q12176 1025 aaKnown RBP11.86□□□□□ -0.51
PBP1YGR178C YML133CQ03099 1374 aa11.86□□□□□ -0.51
PBP1YGR178C YLL067CQ07888 1374 aa11.86□□□□□ -0.51
PBP1YGR178C YLL066CQ99208 1374 aa11.86□□□□□ -0.51
PBP1YGR178C PIL1P53252 339 aaKnown RBP11.85□□□□□ -0.51
PBP1YGR178C KAR2P16474 682 aaKnown RBP11.84□□□□□ -0.51
PBP1YGR178C NUP145P49687 1317 aa11.84□□□□□ -0.51
PBP1YGR178C PAP2P53632 584 aaKnown RBP11.83□□□□□ -0.52
PBP1YGR178C RRT14P40470 206 aa11.82□□□□□ -0.52
PBP1YGR178C RAD9P14737 1309 aa11.82□□□□□ -0.52
PBP1YGR178C TRP5P00931 707 aaKnown RBP11.82□□□□□ -0.52
PBP1YGR178C DLD1P32891 587 aa11.82□□□□□ -0.52
PBP1YGR178C RPN1P38764 993 aaKnown RBP11.82□□□□□ -0.52
PBP1YGR178C NPA3P47122 385 aa11.81□□□□□ -0.52
PBP1YGR178C ROM2P51862 1356 aaKnown RBP11.81□□□□□ -0.52
PBP1YGR178C DNF3Q12674 1656 aa11.81□□□□□ -0.52
PBP1YGR178C SIR4P11978 1358 aa11.81□□□□□ -0.52
PBP1YGR178C MIC60P36112 540 aa11.81□□□□□ -0.52
PBP1YGR178C CIR1P42940 261 aa11.81□□□□□ -0.52
PBP1YGR178C SMC3P47037 1230 aa11.81□□□□□ -0.52
PBP1YGR178C ILV3P39522 585 aaKnown RBP11.8□□□□□ -0.52
PBP1YGR178C MIF2P35201 549 aa11.79□□□□□ -0.52
PBP1YGR178C RVS167P39743 482 aaKnown RBP11.79□□□□□ -0.52
PBP1YGR178C HOS3Q02959 697 aaKnown RBP11.79□□□□□ -0.52
PBP1YGR178C NKP2Q06162 153 aa11.79□□□□□ -0.52
PBP1YGR178C RPN12P32496 274 aa11.79□□□□□ -0.52
PBP1YGR178C CWC22P53333 577 aaKnown RBP11.79□□□□□ -0.52
PBP1YGR178C NOP53Q12080 455 aaKnown RBP11.78□□□□□ -0.52
PBP1YGR178C PSK1P31374 1356 aa11.78□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms