RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W CAF120P53836 1060 aa4.7□□□□□ -1.66
SMD1YGR074W IFH1P39520 1085 aa4.69□□□□□ -1.66
SMD1YGR074W ACO2P39533 789 aa4.69□□□□□ -1.66
SMD1YGR074W NRD1P53617 575 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
SMD1YGR074W TY1A-DR4O74302 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-HP0C2I4 478 aaKnown RBP4.68□□□□□ -1.66
SMD1YGR074W TY1A-AP0CX57 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-PR1P0CX58 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-ORP0CX59 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-PR2P0CX60 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-DR5P0CX65 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-ER2P0CX66 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-GR3P0CX67 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-LR1P0CX68 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-MR2P0CX69 440 aa4.68□□□□□ -1.66
SMD1YGR074W PAT1P25644 796 aaKnown RBP4.68□□□□□ -1.66
SMD1YGR074W TY1A-JR2P47099 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-DR1Q03856 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-ML1Q04706 440 aaKnown RBP4.68□□□□□ -1.66
SMD1YGR074W MET32Q12041 191 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-BRQ12217 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-NL2Q12470 440 aa4.68□□□□□ -1.66
SMD1YGR074W TY1A-GR2Q12485 440 aa4.68□□□□□ -1.66
SMD1YGR074W GCD11P32481 527 aaKnown RBP4.67□□□□□ -1.66
SMD1YGR074W TFB4Q12004 338 aa4.67□□□□□ -1.66
SMD1YGR074W RRN7P40992 514 aa4.65□□□□□ -1.67
SMD1YGR074W LSB3P43603 459 aaKnown RBP4.65□□□□□ -1.67
SMD1YGR074W SEC2P17065 759 aa4.64□□□□□ -1.67
SMD1YGR074W CSC1Q06538 782 aa4.64□□□□□ -1.67
SMD1YGR074W PUS1Q12211 544 aaKnown RBP4.64□□□□□ -1.67
SMD1YGR074W YJR115WP47152 169 aa4.63□□□□□ -1.67
SMD1YGR074W GAP1P19145 602 aaPredicted RBP4.62□□□□□ -1.67
SMD1YGR074W ICP55P40051 511 aa4.62□□□□□ -1.67
SMD1YGR074W YDR090CQ03193 310 aa4.62□□□□□ -1.67
SMD1YGR074W TUM1Q08686 304 aaKnown RBP4.62□□□□□ -1.67
SMD1YGR074W YPR204WQ08995 1032 aa4.62□□□□□ -1.67
SMD1YGR074W REF2P42073 533 aaPredicted RBP4.6□□□□□ -1.67
SMD1YGR074W HPF1Q05164 967 aa4.6□□□□□ -1.67
SMD1YGR074W YLR346CQ06139 101 aa4.57□□□□□ -1.68
SMD1YGR074W MSB3P48566 633 aaPredicted RBP4.56□□□□□ -1.68
SMD1YGR074W DMA1P38823 416 aa4.54□□□□□ -1.68
SMD1YGR074W OPT2Q06593 877 aa4.54□□□□□ -1.68
SMD1YGR074W MAK21Q12176 1025 aaKnown RBP4.54□□□□□ -1.68
SMD1YGR074W PHM7Q12252 991 aa4.54□□□□□ -1.68
SMD1YGR074W ORC6P38826 435 aa4.53□□□□□ -1.68
SMD1YGR074W COX6P00427 148 aa4.52□□□□□ -1.69
SMD1YGR074W MOD5P07884 428 aa4.52□□□□□ -1.69
SMD1YGR074W GLY1P37303 387 aaKnown RBP4.52□□□□□ -1.69
SMD1YGR074W YIR007WP40566 764 aa4.52□□□□□ -1.69
SMD1YGR074W MVP1P40959 511 aaKnown RBP4.52□□□□□ -1.69
SMD1YGR074W YPR148CQ06523 435 aa4.52□□□□□ -1.69
SMD1YGR074W YPR109WQ06104 294 aa4.51□□□□□ -1.69
SMD1YGR074W VPS70P47161 811 aa4.49□□□□□ -1.69
SMD1YGR074W PUS5Q06244 254 aa4.49□□□□□ -1.69
SMD1YGR074W RGR1P19263 1082 aa4.48□□□□□ -1.69
SMD1YGR074W SCW11P53189 542 aa4.48□□□□□ -1.69
SMD1YGR074W SRF1Q12516 437 aa4.48□□□□□ -1.69
SMD1YGR074W PTK2P47116 818 aaKnown RBP4.47□□□□□ -1.69
SMD1YGR074W DPH6Q12429 685 aa4.46□□□□□ -1.7
SMD1YGR074W UGA3P26370 528 aa4.45□□□□□ -1.7
SMD1YGR074W PAC1P39946 494 aaKnown RBP4.44□□□□□ -1.7
SMD1YGR074W TYW1Q08960 810 aaKnown RBP4.44□□□□□ -1.7
SMD1YGR074W TY1A-BLQ12266 440 aa4.44□□□□□ -1.7
SMD1YGR074W KEX2P13134 814 aa4.43□□□□□ -1.7
SMD1YGR074W MIP1P15801 1254 aa4.43□□□□□ -1.7
SMD1YGR074W NUP85P46673 744 aa4.42□□□□□ -1.7
SMD1YGR074W CLB5P30283 435 aa4.4□□□□□ -1.71
SMD1YGR074W ERF2Q06551 359 aa4.4□□□□□ -1.71
SMD1YGR074W PSE1P32337 1089 aaKnown RBP4.39□□□□□ -1.71
SMD1YGR074W SYH1Q02875 849 aaKnown RBP4.39□□□□□ -1.71
SMD1YGR074W CKB1P43639 278 aa4.38□□□□□ -1.71
SMD1YGR074W CCT8P47079 568 aaKnown RBP4.38□□□□□ -1.71
SMD1YGR074W PBS2P08018 668 aa4.37□□□□□ -1.71
SMD1YGR074W MDJ1P35191 511 aa4.37□□□□□ -1.71
SMD1YGR074W TUB4P53378 473 aa4.37□□□□□ -1.71
SMD1YGR074W NSG2P53898 299 aa4.37□□□□□ -1.71
SMD1YGR074W RTT106P40161 455 aa4.36□□□□□ -1.71
SMD1YGR074W RTF1P53064 558 aa4.36□□□□□ -1.71
SMD1YGR074W YNL115CP53925 644 aa4.36□□□□□ -1.71
SMD1YGR074W SBP1P10080 294 aaKnown RBP4.35□□□□□ -1.71
SMD1YGR074W LYS5P50113 272 aa4.35□□□□□ -1.71
SMD1YGR074W KXD1P53158 218 aa4.35□□□□□ -1.71
SMD1YGR074W AGE1Q04412 482 aa4.35□□□□□ -1.71
SMD1YGR074W TPD3P31383 635 aa4.34□□□□□ -1.71
SMD1YGR074W UBP2Q01476 1272 aa4.33□□□□□ -1.72
SMD1YGR074W JJJ3P47138 172 aa4.32□□□□□ -1.72
SMD1YGR074W MAM3Q12296 706 aa4.32□□□□□ -1.72
SMD1YGR074W ROG3P43602 733 aa4.31□□□□□ -1.72
SMD1YGR074W TEA1P47988 759 aa4.31□□□□□ -1.72
SMD1YGR074W HXT10P43581 546 aa4.3□□□□□ -1.72
SMD1YGR074W LSC2P53312 427 aa4.3□□□□□ -1.72
SMD1YGR074W SIT4P20604 311 aa4.29□□□□□ -1.72
SMD1YGR074W TY1A-MR1Q04215 440 aa4.29□□□□□ -1.72
SMD1YGR074W KIP2P28743 706 aa4.27□□□□□ -1.73
SMD1YGR074W AI1P03875 834 aa4.26□□□□□ -1.73
SMD1YGR074W MRT4P33201 236 aaKnown RBP4.26□□□□□ -1.73
SMD1YGR074W THI72Q08579 599 aa4.26□□□□□ -1.73
SMD1YGR074W YPR053CQ6Q5F3 151 aa4.26□□□□□ -1.73
SMD1YGR074W CCP1P00431 361 aa4.25□□□□□ -1.73
SMD1YGR074W PDC1P06169 563 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms