RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W DOS2P54858 310 aa9.05□□□□□ -0.96
SNU71YGR013W MSC6Q08818 692 aaKnown RBP9.05□□□□□ -0.96
SNU71YGR013W PEP12P32854 288 aa9.03□□□□□ -0.96
SNU71YGR013W GAP1P19145 602 aaPredicted RBP9.02□□□□□ -0.96
SNU71YGR013W ECM23Q02710 187 aa9.02□□□□□ -0.96
SNU71YGR013W HAA1Q12753 694 aaKnown RBP9.02□□□□□ -0.96
SNU71YGR013W MAK16P10962 306 aaPredicted RBP9.02□□□□□ -0.97
SNU71YGR013W ATE1P16639 503 aa9.02□□□□□ -0.97
SNU71YGR013W NST1P53935 1240 aa9.02□□□□□ -0.97
SNU71YGR013W TOP1P04786 769 aa9.01□□□□□ -0.97
SNU71YGR013W RSC30P38781 883 aa9.01□□□□□ -0.97
SNU71YGR013W FAR11P53917 953 aa9.01□□□□□ -0.97
SNU71YGR013W ALD4P46367 519 aaKnown RBP9□□□□□ -0.97
SNU71YGR013W YPR109WQ06104 294 aa9□□□□□ -0.97
SNU71YGR013W SIT4P20604 311 aa9□□□□□ -0.97
SNU71YGR013W RDS2P19541 446 aaKnown RBP8.99□□□□□ -0.97
SNU71YGR013W POL32P47110 350 aa8.99□□□□□ -0.97
SNU71YGR013W NSR1P27476 414 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
SNU71YGR013W SAM3Q08986 587 aa8.98□□□□□ -0.97
SNU71YGR013W TCB3Q03640 1545 aaKnown RBP8.98□□□□□ -0.97
SNU71YGR013W SWR1Q05471 1514 aa8.98□□□□□ -0.97
SNU71YGR013W KTR7P40504 517 aa8.98□□□□□ -0.97
SNU71YGR013W TRL1P09880 827 aaKnown RBP8.97□□□□□ -0.97
SNU71YGR013W TPS3P38426 1054 aaKnown RBP8.97□□□□□ -0.97
SNU71YGR013W YHL050CP38721 697 aa8.97□□□□□ -0.97
SNU71YGR013W YHR219WP38900 624 aa8.97□□□□□ -0.97
SNU71YGR013W NNF1P47149 201 aa8.97□□□□□ -0.97
SNU71YGR013W FPR4Q06205 392 aaPredicted RBP8.97□□□□□ -0.97
SNU71YGR013W YEL077CQ3E7X8 1277 aa8.97□□□□□ -0.97
SNU71YGR013W YAP5P40574 245 aa8.96□□□□□ -0.98
SNU71YGR013W GYP5Q12344 894 aa8.96□□□□□ -0.98
SNU71YGR013W ILV3P39522 585 aaKnown RBP8.95□□□□□ -0.98
SNU71YGR013W KAR5Q04746 504 aa8.95□□□□□ -0.98
SNU71YGR013W CSC1Q06538 782 aa8.95□□□□□ -0.98
SNU71YGR013W WHI5Q12416 295 aa8.95□□□□□ -0.98
SNU71YGR013W DNA2P38859 1522 aa8.94□□□□□ -0.98
SNU71YGR013W UBX7P38349 436 aa8.94□□□□□ -0.98
SNU71YGR013W CST6P40535 587 aa8.94□□□□□ -0.98
SNU71YGR013W MDJ2P42834 146 aa8.94□□□□□ -0.98
SNU71YGR013W SVF1Q05515 481 aa8.94□□□□□ -0.98
SNU71YGR013W TY1B-DR4Q07793 1604 aa8.94□□□□□ -0.98
SNU71YGR013W YAF9P53930 226 aa8.94□□□□□ -0.98
SNU71YGR013W YPP1P46951 817 aa8.93□□□□□ -0.98
SNU71YGR013W GAL2P13181 574 aa8.92□□□□□ -0.98
SNU71YGR013W GRS1P38088 690 aaKnown RBP8.92□□□□□ -0.98
SNU71YGR013W LAM6Q08001 693 aa8.91□□□□□ -0.98
SNU71YGR013W PPX1P38698 397 aa8.91□□□□□ -0.98
SNU71YGR013W OYE2Q03558 400 aaKnown RBP8.91□□□□□ -0.98
SNU71YGR013W CWC15Q03772 175 aaKnown RBP8.91□□□□□ -0.98
SNU71YGR013W SGS1P35187 1447 aa8.91□□□□□ -0.98
SNU71YGR013W SEC8P32855 1065 aa8.9□□□□□ -0.98
SNU71YGR013W NMD2P38798 1089 aaKnown RBP8.9□□□□□ -0.98
SNU71YGR013W STB3Q12427 513 aa8.9□□□□□ -0.98
SNU71YGR013W MPH3P0CE00 602 aa8.89□□□□□ -0.99
SNU71YGR013W SLY41P22215 453 aa8.89□□□□□ -0.99
SNU71YGR013W ATG36P46983 293 aa8.89□□□□□ -0.99
SNU71YGR013W MCM16Q12262 181 aa8.89□□□□□ -0.99
SNU71YGR013W AI4P03878 556 aa8.88□□□□□ -0.99
SNU71YGR013W NAF1P53919 492 aaKnown RBP8.88□□□□□ -0.99
SNU71YGR013W MAG2Q06436 670 aaKnown RBP8.88□□□□□ -0.99
SNU71YGR013W SLI15P38283 698 aa8.87□□□□□ -0.99
SNU71YGR013W THI12P42883 340 aa8.87□□□□□ -0.99
SNU71YGR013W THI5P43534 340 aa8.87□□□□□ -0.99
SNU71YGR013W THI11P47183 340 aa8.87□□□□□ -0.99
SNU71YGR013W THI13Q07748 340 aa8.87□□□□□ -0.99
SNU71YGR013W DCW1P36091 449 aa8.87□□□□□ -0.99
SNU71YGR013W JIP5Q06214 492 aaPredicted RBP8.86□□□□□ -0.99
SNU71YGR013W TFB4Q12004 338 aa8.85□□□□□ -0.99
SNU71YGR013W YOL098CQ12496 1037 aa8.85□□□□□ -0.99
SNU71YGR013W ISF1P32488 338 aa8.84□□□□□ -0.99
SNU71YGR013W RNH70P53331 553 aa8.84□□□□□ -0.99
SNU71YGR013W CDC73Q06697 393 aa8.83□□□□□ -1
SNU71YGR013W RPP1BP10622 106 aaKnown RBP8.83□□□□□ -1
SNU71YGR013W TRM1P15565 570 aaKnown RBP8.83□□□□□ -1
SNU71YGR013W ATG1P53104 897 aa8.83□□□□□ -1
SNU71YGR013W BOL3P39724 118 aa8.82□□□□□ -1
SNU71YGR013W YJR107WP47145 328 aa8.82□□□□□ -1
SNU71YGR013W ENV9Q08651 330 aa8.82□□□□□ -1
SNU71YGR013W TUM1Q08686 304 aaKnown RBP8.82□□□□□ -1
SNU71YGR013W PUF6Q04373 656 aaKnown RBP8.81□□□□□ -1
SNU71YGR013W YNL115CP53925 644 aa8.81□□□□□ -1
SNU71YGR013W KOG1P38873 1557 aa8.8□□□□□ -1
SNU71YGR013W MET1P36150 593 aa8.8□□□□□ -1
SNU71YGR013W PNP1Q05788 311 aa8.8□□□□□ -1
SNU71YGR013W NUT2Q06213 157 aa8.8□□□□□ -1
SNU71YGR013W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
SNU71YGR013W EMP47P43555 445 aa8.79□□□□□ -1
SNU71YGR013W FRT1Q99332 602 aa8.79□□□□□ -1
SNU71YGR013W MGE1P38523 228 aa8.79□□□□□ -1
SNU71YGR013W NUG1P40010 520 aaKnown RBP8.79□□□□□ -1
SNU71YGR013W YJR008WP47085 338 aa8.78□□□□□ -1
SNU71YGR013W PEX21P50091 288 aa8.78□□□□□ -1
SNU71YGR013W RTS3P53289 263 aa8.78□□□□□ -1
SNU71YGR013W PHO87P25360 923 aa8.77□□□□□ -1.01
SNU71YGR013W MET4P32389 672 aa8.77□□□□□ -1.01
SNU71YGR013W RTF1P53064 558 aa8.77□□□□□ -1.01
SNU71YGR013W YGL015CP33199 130 aa8.77□□□□□ -1.01
SNU71YGR013W DAN4P47179 1161 aa8.77□□□□□ -1.01
SNU71YGR013W VAC8P39968 578 aa8.76□□□□□ -1.01
SNU71YGR013W ROM1P53046 1155 aa8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms