RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W NAP1P25293 417 aaKnown RBP7.38□□□□□ -1.23
SHE10YGL228W RCM1P53972 490 aa7.38□□□□□ -1.23
SHE10YGL228W PPH3P32345 308 aa7.37□□□□□ -1.23
SHE10YGL228W YIL177CP40434 1758 aa7.36□□□□□ -1.23
SHE10YGL228W YJL225CP40889 1758 aa7.36□□□□□ -1.23
SHE10YGL228W CHZ1P40019 153 aaPredicted RBP7.35□□□□□ -1.23
SHE10YGL228W YML133CQ03099 1374 aa7.35□□□□□ -1.23
SHE10YGL228W YLL067CQ07888 1374 aa7.35□□□□□ -1.23
SHE10YGL228W YLL066CQ99208 1374 aa7.35□□□□□ -1.23
SHE10YGL228W PSK1P31374 1356 aa7.33□□□□□ -1.24
SHE10YGL228W CPS1P27614 576 aa7.33□□□□□ -1.24
SHE10YGL228W PDS5Q04264 1277 aa7.33□□□□□ -1.24
SHE10YGL228W RRP5Q05022 1729 aaKnown RBP7.33□□□□□ -1.24
SHE10YGL228W SPT7P35177 1332 aa7.33□□□□□ -1.24
SHE10YGL228W RTG3P38165 486 aa7.31□□□□□ -1.24
SHE10YGL228W PSD2P53037 1138 aaKnown RBP7.31□□□□□ -1.24
SHE10YGL228W NST1P53935 1240 aa7.31□□□□□ -1.24
SHE10YGL228W FKH1P40466 484 aa7.3□□□□□ -1.24
SHE10YGL228W SEC3P33332 1336 aaKnown RBP7.28□□□□□ -1.24
SHE10YGL228W LEU3P08638 886 aa7.28□□□□□ -1.24
SHE10YGL228W URB1P34241 1764 aaKnown RBP7.27□□□□□ -1.25
SHE10YGL228W SCT1P32784 759 aa7.27□□□□□ -1.25
SHE10YGL228W ADE6P38972 1358 aaKnown RBP7.26□□□□□ -1.25
SHE10YGL228W FKS3Q04952 1785 aa7.26□□□□□ -1.25
SHE10YGL228W YRF1-2P40105 1681 aa7.26□□□□□ -1.25
SHE10YGL228W LEU2P04173 364 aaPredicted RBP7.24□□□□□ -1.25
SHE10YGL228W PTP3P40048 928 aa7.24□□□□□ -1.25
SHE10YGL228W SNF2P22082 1703 aa7.23□□□□□ -1.25
SHE10YGL228W YEF3P16521 1044 aaKnown RBP7.22□□□□□ -1.25
SHE10YGL228W MTR4P47047 1073 aaKnown RBP7.22□□□□□ -1.25
SHE10YGL228W RPS24AP0CX31 135 aaKnown RBP7.21□□□□□ -1.25
SHE10YGL228W RPS24BP0CX32 135 aaKnown RBP7.21□□□□□ -1.25
SHE10YGL228W CSE4P36012 229 aa7.21□□□□□ -1.26
SHE10YGL228W AUS1Q08409 1394 aa7.2□□□□□ -1.26
SHE10YGL228W TRK1P12685 1235 aa7.2□□□□□ -1.26
SHE10YGL228W PRP43P53131 767 aaKnown RBP7.2□□□□□ -1.26
SHE10YGL228W YRF1-3P0CX14 1859 aa7.19□□□□□ -1.26
SHE10YGL228W YRF1-7P0CX15 1859 aa7.19□□□□□ -1.26
SHE10YGL228W YRF1-6P53819 1859 aa7.19□□□□□ -1.26
SHE10YGL228W APC1P53886 1748 aa7.19□□□□□ -1.26
SHE10YGL228W PDI1P17967 522 aaKnown RBP7.18□□□□□ -1.26
SHE10YGL228W NSR1P27476 414 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
SHE10YGL228W HIM1Q06674 414 aa7.18□□□□□ -1.26
SHE10YGL228W PRP45P28004 379 aaPredicted RBP7.17□□□□□ -1.26
SHE10YGL228W ENP1P38333 483 aaKnown RBP7.17□□□□□ -1.26
SHE10YGL228W TAP42Q04372 366 aa7.16□□□□□ -1.26
SHE10YGL228W GAS4Q08271 471 aa7.16□□□□□ -1.26
SHE10YGL228W REB1P21538 810 aa7.15□□□□□ -1.26
SHE10YGL228W PRP5P21372 849 aaPredicted RBP7.15□□□□□ -1.27
SHE10YGL228W APP1P53933 587 aa7.15□□□□□ -1.27
SHE10YGL228W DPS1P04802 557 aaKnown RBP7.14□□□□□ -1.27
SHE10YGL228W KAR2P16474 682 aaKnown RBP7.14□□□□□ -1.27
SHE10YGL228W MSB3P48566 633 aaPredicted RBP7.14□□□□□ -1.27
SHE10YGL228W RTF1P53064 558 aa7.14□□□□□ -1.27
SHE10YGL228W ENT1Q12518 454 aa7.13□□□□□ -1.27
SHE10YGL228W GRX4P32642 244 aa7.12□□□□□ -1.27
SHE10YGL228W RRP46P53256 223 aaPredicted RBP7.12□□□□□ -1.27
SHE10YGL228W YCK3P39962 524 aa7.11□□□□□ -1.27
SHE10YGL228W SLM3Q12093 417 aa7.11□□□□□ -1.27
SHE10YGL228W YAH1Q12184 172 aaKnown RBP7.11□□□□□ -1.27
SHE10YGL228W ENV9Q08651 330 aa7.1□□□□□ -1.27
SHE10YGL228W RPO41P13433 1351 aaKnown RBP7.09□□□□□ -1.27
SHE10YGL228W PAP2P53632 584 aaKnown RBP7.09□□□□□ -1.27
SHE10YGL228W RIM15P43565 1770 aa7.08□□□□□ -1.28
SHE10YGL228W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
SHE10YGL228W TCB1Q12466 1186 aa7.07□□□□□ -1.28
SHE10YGL228W RSF2P46974 1380 aa7.07□□□□□ -1.28
SHE10YGL228W PRS1P32895 427 aaKnown RBP7.07□□□□□ -1.28
SHE10YGL228W AAD16Q02895 342 aa7.07□□□□□ -1.28
SHE10YGL228W YRF1-4O13559 1382 aa7.06□□□□□ -1.28
SHE10YGL228W XKS1P42826 600 aa7.06□□□□□ -1.28
SHE10YGL228W MPP10P47083 593 aaKnown RBP7.06□□□□□ -1.28
SHE10YGL228W RTR1P40084 226 aaPredicted RBP7.05□□□□□ -1.28
SHE10YGL228W IOC4Q04213 475 aa7.05□□□□□ -1.28
SHE10YGL228W YDL144CQ07589 356 aa7.05□□□□□ -1.28
SHE10YGL228W IMH1Q06704 911 aaKnown RBP7.04□□□□□ -1.28
SHE10YGL228W AKL1P38080 1108 aaKnown RBP7.03□□□□□ -1.28
SHE10YGL228W RCR1P38212 213 aa7.03□□□□□ -1.28
SHE10YGL228W HAA1Q12753 694 aaKnown RBP7.03□□□□□ -1.28
SHE10YGL228W PRD1P25375 712 aa7.02□□□□□ -1.29
SHE10YGL228W IES2P40154 320 aa7.02□□□□□ -1.29
SHE10YGL228W DSD1P53095 428 aa7.02□□□□□ -1.29
SHE10YGL228W SIR4P11978 1358 aa7.02□□□□□ -1.29
SHE10YGL228W THI22Q06490 572 aa7.01□□□□□ -1.29
SHE10YGL228W SUI2P20459 304 aaKnown RBP7□□□□□ -1.29
SHE10YGL228W HSP104P31539 908 aaKnown RBP7□□□□□ -1.29
SHE10YGL228W YIL055CP40523 627 aaKnown RBP7□□□□□ -1.29
SHE10YGL228W RPP0P05317 312 aaKnown RBP6.99□□□□□ -1.29
SHE10YGL228W VPS27P40343 622 aaKnown RBP6.99□□□□□ -1.29
SHE10YGL228W SAP155P43612 1002 aa6.99□□□□□ -1.29
SHE10YGL228W PRI1P10363 409 aa6.98□□□□□ -1.29
SHE10YGL228W TPD3P31383 635 aa6.98□□□□□ -1.29
SHE10YGL228W NTH2P35172 780 aa6.98□□□□□ -1.29
SHE10YGL228W HEF3P53978 1044 aaKnown RBP6.98□□□□□ -1.29
SHE10YGL228W RTT109Q07794 436 aa6.98□□□□□ -1.29
SHE10YGL228W CDC45Q08032 650 aa6.98□□□□□ -1.29
SHE10YGL228W RVB2Q12464 471 aaKnown RBP6.98□□□□□ -1.29
SHE10YGL228W ROM2P51862 1356 aaKnown RBP6.97□□□□□ -1.29
SHE10YGL228W YKL133CP36066 463 aa6.97□□□□□ -1.29
SHE10YGL228W DOT5P40553 215 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms