RNA–Protein interactions for RNA: YGL008C

PMA1, Transcript of Plasma membrane P2-type H+-ATPase, yeastyeast

Gene PMA1, Length 2,757 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMA1YGL008C BOI2P39969 1040 aa6.55□□□□□ -1.36
PMA1YGL008C VMA4P22203 233 aaKnown RBP6.54□□□□□ -1.36
PMA1YGL008C YPR204WQ08995 1032 aa6.54□□□□□ -1.36
PMA1YGL008C THO2P53552 1597 aaKnown RBP6.54□□□□□ -1.36
PMA1YGL008C SSA2P10592 639 aaKnown RBP6.54□□□□□ -1.36
PMA1YGL008C RTG2P32608 588 aaKnown RBP6.54□□□□□ -1.36
PMA1YGL008C MPE1P35728 441 aaKnown RBP6.54□□□□□ -1.36
PMA1YGL008C DAL5P15365 543 aa6.53□□□□□ -1.36
PMA1YGL008C ERP5P38819 212 aa6.53□□□□□ -1.36
PMA1YGL008C SSB1P11484 613 aaKnown RBP6.53□□□□□ -1.36
PMA1YGL008C SUP45P12385 437 aaKnown RBP6.53□□□□□ -1.36
PMA1YGL008C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
PMA1YGL008C TPS3P38426 1054 aaKnown RBP6.53□□□□□ -1.36
PMA1YGL008C SSB2P40150 613 aaKnown RBP6.53□□□□□ -1.36
PMA1YGL008C TY4A-JP47023 414 aa6.53□□□□□ -1.36
PMA1YGL008C DCD1P06773 312 aa6.52□□□□□ -1.37
PMA1YGL008C NFU1P32860 256 aa6.52□□□□□ -1.37
PMA1YGL008C GIR2Q03768 265 aaPredicted RBP6.52□□□□□ -1.37
PMA1YGL008C SVF1Q05515 481 aa6.52□□□□□ -1.37
PMA1YGL008C STM1P39015 273 aaKnown RBP6.52□□□□□ -1.37
PMA1YGL008C MRX10Q05648 414 aa6.52□□□□□ -1.37
PMA1YGL008C HOP09932 586 aa6.52□□□□□ -1.37
PMA1YGL008C MRM1P25270 412 aa6.52□□□□□ -1.37
PMA1YGL008C EDS1P38073 919 aa6.52□□□□□ -1.37
PMA1YGL008C DNM1P54861 757 aa6.52□□□□□ -1.37
PMA1YGL008C YBL113CQ7M4S9 792 aa6.52□□□□□ -1.37
PMA1YGL008C SEC8P32855 1065 aa6.51□□□□□ -1.37
PMA1YGL008C MDJ2P42834 146 aa6.51□□□□□ -1.37
PMA1YGL008C ALD3P54114 506 aa6.51□□□□□ -1.37
PMA1YGL008C POL32P47110 350 aa6.5□□□□□ -1.37
PMA1YGL008C FPR3P38911 411 aaKnown RBP6.49□□□□□ -1.37
PMA1YGL008C TAT2P38967 592 aa6.49□□□□□ -1.37
PMA1YGL008C RPN4Q03465 531 aa6.49□□□□□ -1.37
PMA1YGL008C YJR107WP47145 328 aa6.49□□□□□ -1.37
PMA1YGL008C HIR3P47171 1648 aa6.49□□□□□ -1.37
PMA1YGL008C POL5P39985 1022 aaKnown RBP6.48□□□□□ -1.37
PMA1YGL008C UBP14P38237 781 aaKnown RBP6.48□□□□□ -1.37
PMA1YGL008C VPS29P38759 282 aa6.48□□□□□ -1.37
PMA1YGL008C YNL108CP53929 270 aa6.48□□□□□ -1.37
PMA1YGL008C TYW1Q08960 810 aaKnown RBP6.47□□□□□ -1.37
PMA1YGL008C SEC20P28791 383 aa6.47□□□□□ -1.37
PMA1YGL008C RRP14P36080 434 aaKnown RBP6.47□□□□□ -1.37
PMA1YGL008C YHL050CP38721 697 aa6.47□□□□□ -1.37
PMA1YGL008C YHR219WP38900 624 aa6.47□□□□□ -1.37
PMA1YGL008C YEL077CQ3E7X8 1277 aa6.47□□□□□ -1.37
PMA1YGL008C ENO1P00924 437 aaKnown RBP6.46□□□□□ -1.37
PMA1YGL008C TGL4P36165 910 aa6.46□□□□□ -1.37
PMA1YGL008C RTG3P38165 486 aa6.46□□□□□ -1.37
PMA1YGL008C SSF2Q12153 453 aaPredicted RBP6.46□□□□□ -1.37
PMA1YGL008C OYE2Q03558 400 aaKnown RBP6.46□□□□□ -1.38
PMA1YGL008C PPG1P32838 368 aa6.46□□□□□ -1.38
PMA1YGL008C FUI1P38196 639 aa6.46□□□□□ -1.38
PMA1YGL008C TFG1P41895 735 aaPredicted RBP6.46□□□□□ -1.38
PMA1YGL008C PSH1Q12161 406 aa6.46□□□□□ -1.38
PMA1YGL008C EBP2P36049 427 aaKnown RBP6.45□□□□□ -1.38
PMA1YGL008C VAC8P39968 578 aa6.45□□□□□ -1.38
PMA1YGL008C SKI3P17883 1432 aaKnown RBP6.45□□□□□ -1.38
PMA1YGL008C GLO3P38682 493 aaKnown RBP6.45□□□□□ -1.38
PMA1YGL008C PPX1P38698 397 aa6.45□□□□□ -1.38
PMA1YGL008C YJR142WP47173 342 aa6.45□□□□□ -1.38
PMA1YGL008C MNL2Q12205 849 aa6.45□□□□□ -1.38
PMA1YGL008C TAF13P11747 167 aa6.44□□□□□ -1.38
PMA1YGL008C PEP12P32854 288 aa6.44□□□□□ -1.38
PMA1YGL008C BCH2P36122 765 aa6.44□□□□□ -1.38
PMA1YGL008C UBP12P39538 1254 aa6.44□□□□□ -1.38
PMA1YGL008C RTF1P53064 558 aa6.44□□□□□ -1.38
PMA1YGL008C ENO2P00925 437 aaKnown RBP6.43□□□□□ -1.38
PMA1YGL008C RDS2P19541 446 aaKnown RBP6.43□□□□□ -1.38
PMA1YGL008C RPT2P40327 437 aaKnown RBP6.43□□□□□ -1.38
PMA1YGL008C RIM21P48565 533 aa6.43□□□□□ -1.38
PMA1YGL008C ERP2P39704 215 aa6.42□□□□□ -1.38
PMA1YGL008C ECM16Q04217 1267 aaKnown RBP6.42□□□□□ -1.38
PMA1YGL008C NSE3Q05541 303 aa6.42□□□□□ -1.38
PMA1YGL008C ATG1P53104 897 aa6.42□□□□□ -1.38
PMA1YGL008C JIP5Q06214 492 aaPredicted RBP6.42□□□□□ -1.38
PMA1YGL008C YDJ1P25491 409 aaKnown RBP6.41□□□□□ -1.38
PMA1YGL008C MET4P32389 672 aa6.41□□□□□ -1.38
PMA1YGL008C MET1P36150 593 aa6.41□□□□□ -1.38
PMA1YGL008C PPM2Q08282 695 aa6.41□□□□□ -1.38
PMA1YGL008C SEC6P32844 805 aa6.41□□□□□ -1.38
PMA1YGL008C RPL34BP40525 121 aaKnown RBP6.41□□□□□ -1.38
PMA1YGL008C TMA64Q04600 565 aaKnown RBP6.41□□□□□ -1.38
PMA1YGL008C CDC11P32458 415 aa6.4□□□□□ -1.38
PMA1YGL008C RPS0AP32905 252 aaKnown RBP6.4□□□□□ -1.38
PMA1YGL008C PBP2P38151 413 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
PMA1YGL008C YBL036CP38197 257 aa6.4□□□□□ -1.38
PMA1YGL008C CWC15Q03772 175 aaKnown RBP6.4□□□□□ -1.38
PMA1YGL008C FYV10P40492 516 aa6.4□□□□□ -1.38
PMA1YGL008C COG4Q06096 861 aa6.4□□□□□ -1.38
PMA1YGL008C NKP1Q12493 238 aa6.4□□□□□ -1.38
PMA1YGL008C PSE1P32337 1089 aaKnown RBP6.4□□□□□ -1.39
PMA1YGL008C MTO1P53070 669 aa6.4□□□□□ -1.39
PMA1YGL008C FRT1Q99332 602 aa6.4□□□□□ -1.39
PMA1YGL008C FAF1P40546 346 aaPredicted RBP6.39□□□□□ -1.39
PMA1YGL008C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
PMA1YGL008C SRP40P32583 406 aaPredicted RBP6.39□□□□□ -1.39
PMA1YGL008C VPS24P36095 224 aaKnown RBP6.39□□□□□ -1.39
PMA1YGL008C HOS4P40480 1083 aa6.39□□□□□ -1.39
PMA1YGL008C ALD6P54115 500 aaKnown RBP6.39□□□□□ -1.39
PMA1YGL008C BUD4P47136 1447 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 103.5 ms