RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	UGA2	P38067	497 aa		5.19	□□□□□ -1.58
RAD4	YER162C	RRD1	P40454	393 aa	Known RBP	5.19	□□□□□ -1.58
RAD4	YER162C	RAV1	P47104	1357 aa		5.19	□□□□□ -1.58
RAD4	YER162C	ALD4	P46367	519 aa	Known RBP	5.18	□□□□□ -1.58
RAD4	YER162C	URB1	P34241	1764 aa	Known RBP	5.18	□□□□□ -1.58
RAD4	YER162C	CAB1	Q04430	367 aa		5.16	□□□□□ -1.58
RAD4	YER162C	DIP2	Q12220	943 aa	Predicted RBP	5.16	□□□□□ -1.58
RAD4	YER162C	RPN11	P43588	306 aa	Known RBP	5.15	□□□□□ -1.58
RAD4	YER162C	RAD9	P14737	1309 aa		5.15	□□□□□ -1.58
RAD4	YER162C	ALD2	P47771	506 aa		5.14	□□□□□ -1.59
RAD4	YER162C	AIM44	Q99299	758 aa		5.14	□□□□□ -1.59
RAD4	YER162C	ROM2	P51862	1356 aa	Known RBP	5.14	□□□□□ -1.59
RAD4	YER162C	PRP45	P28004	379 aa	Predicted RBP	5.14	□□□□□ -1.59
RAD4	YER162C	SSA2	P10592	639 aa	Known RBP	5.13	□□□□□ -1.59
RAD4	YER162C	NAP1	P25293	417 aa	Known RBP	5.13	□□□□□ -1.59
RAD4	YER162C	DOT5	P40553	215 aa		5.13	□□□□□ -1.59
RAD4	YER162C	IKI3	Q06706	1349 aa	Known RBP	5.13	□□□□□ -1.59
RAD4	YER162C	LEU3	P08638	886 aa		5.13	□□□□□ -1.59
RAD4	YER162C	NPR2	P39923	615 aa		5.13	□□□□□ -1.59
RAD4	YER162C	TY4B-H	P0C2J7	1802 aa		5.13	□□□□□ -1.59
RAD4	YER162C	TY4B-J	P47024	1803 aa		5.13	□□□□□ -1.59
RAD4	YER162C	PSK1	P31374	1356 aa		5.12	□□□□□ -1.59
RAD4	YER162C	RTC1	Q08281	1341 aa		5.12	□□□□□ -1.59
RAD4	YER162C	YEF3	P16521	1044 aa	Known RBP	5.12	□□□□□ -1.59
RAD4	YER162C	FKS3	Q04952	1785 aa		5.12	□□□□□ -1.59
RAD4	YER162C	PRP5	P21372	849 aa	Predicted RBP	5.11	□□□□□ -1.59
RAD4	YER162C	LYS4	P49367	693 aa	Predicted RBP	5.11	□□□□□ -1.59
RAD4	YER162C	CPS1	P27614	576 aa		5.11	□□□□□ -1.59
RAD4	YER162C	TAF5	P38129	798 aa		5.11	□□□□□ -1.59
RAD4	YER162C	IES2	P40154	320 aa		5.11	□□□□□ -1.59
RAD4	YER162C	CTH1	P47976	325 aa		5.11	□□□□□ -1.59
RAD4	YER162C	FOX2	Q02207	900 aa	Known RBP	5.09	□□□□□ -1.59
RAD4	YER162C	IOC4	Q04213	475 aa		5.09	□□□□□ -1.59
RAD4	YER162C	YRF1-3	P0CX14	1859 aa		5.09	□□□□□ -1.59
RAD4	YER162C	YRF1-7	P0CX15	1859 aa		5.09	□□□□□ -1.59
RAD4	YER162C	ADE6	P38972	1358 aa	Known RBP	5.09	□□□□□ -1.59
RAD4	YER162C	RSF2	P46974	1380 aa		5.09	□□□□□ -1.59
RAD4	YER162C	YRF1-6	P53819	1859 aa		5.09	□□□□□ -1.59
RAD4	YER162C	PAF1	P38351	445 aa		5.08	□□□□□ -1.6
RAD4	YER162C	SSM4	P40318	1319 aa		5.07	□□□□□ -1.6
RAD4	YER162C	YJL181W	P46987	611 aa		5.07	□□□□□ -1.6
RAD4	YER162C	PRP40	P33203	583 aa	Known RBP	5.06	□□□□□ -1.6
RAD4	YER162C	MSB3	P48566	633 aa	Predicted RBP	5.06	□□□□□ -1.6
RAD4	YER162C	SNF2	P22082	1703 aa		5.05	□□□□□ -1.6
RAD4	YER162C	LAM6	Q08001	693 aa		5.05	□□□□□ -1.6
RAD4	YER162C	TCB1	Q12466	1186 aa		5.04	□□□□□ -1.6
RAD4	YER162C	SPT7	P35177	1332 aa		5.04	□□□□□ -1.6
RAD4	YER162C	YKR075C	P36155	307 aa		5.03	□□□□□ -1.6
RAD4	YER162C	PRP43	P53131	767 aa	Known RBP	5.02	□□□□□ -1.61
RAD4	YER162C	RCM1	P53972	490 aa		5.02	□□□□□ -1.61
RAD4	YER162C	SLM3	Q12093	417 aa		5.02	□□□□□ -1.61
RAD4	YER162C	PPH3	P32345	308 aa		5.01	□□□□□ -1.61
RAD4	YER162C	BDF1	P35817	686 aa		5.01	□□□□□ -1.61
RAD4	YER162C	ALD3	P54114	506 aa		5	□□□□□ -1.61
RAD4	YER162C	COB	P00163	385 aa		4.99	□□□□□ -1.61
RAD4	YER162C	YKL133C	P36066	463 aa		4.99	□□□□□ -1.61
RAD4	YER162C	DMA2	P53924	522 aa		4.99	□□□□□ -1.61
RAD4	YER162C	TAF8	Q03750	510 aa		4.99	□□□□□ -1.61
RAD4	YER162C	APC1	P53886	1748 aa		4.99	□□□□□ -1.61
RAD4	YER162C	ESL2	P36168	1195 aa		4.98	□□□□□ -1.61
RAD4	YER162C	RPG1	P38249	964 aa	Known RBP	4.98	□□□□□ -1.61
RAD4	YER162C	PEX21	P50091	288 aa		4.96	□□□□□ -1.62
RAD4	YER162C	YRB30	P53107	440 aa	Predicted RBP	4.95	□□□□□ -1.62
RAD4	YER162C	PUS5	Q06244	254 aa		4.95	□□□□□ -1.62
RAD4	YER162C	YRF1-4	O13559	1382 aa		4.95	□□□□□ -1.62
RAD4	YER162C	XKS1	P42826	600 aa		4.95	□□□□□ -1.62
RAD4	YER162C	YIL177C	P40434	1758 aa		4.94	□□□□□ -1.62
RAD4	YER162C	YJL225C	P40889	1758 aa		4.94	□□□□□ -1.62
RAD4	YER162C	SSA4	P22202	642 aa	Known RBP	4.94	□□□□□ -1.62
RAD4	YER162C	ENP1	P38333	483 aa	Known RBP	4.94	□□□□□ -1.62
RAD4	YER162C	YLR419W	Q06698	1435 aa	Known RBP	4.94	□□□□□ -1.62
RAD4	YER162C	TOS1	P38288	455 aa		4.94	□□□□□ -1.62
RAD4	YER162C	SAP155	P43612	1002 aa		4.94	□□□□□ -1.62
RAD4	YER162C	EAF6	P47128	113 aa		4.94	□□□□□ -1.62
RAD4	YER162C	CTT1	P06115	562 aa		4.93	□□□□□ -1.62
RAD4	YER162C	MTR4	P47047	1073 aa	Known RBP	4.93	□□□□□ -1.62
RAD4	YER162C	MHP1	P43638	1398 aa		4.93	□□□□□ -1.62
RAD4	YER162C	UTP22	P53254	1237 aa	Predicted RBP	4.93	□□□□□ -1.62
RAD4	YER162C	NOP7	P53261	605 aa	Known RBP	4.93	□□□□□ -1.62
RAD4	YER162C	MSB4	Q12317	492 aa		4.93	□□□□□ -1.62
RAD4	YER162C	SIR4	P11978	1358 aa		4.92	□□□□□ -1.62
RAD4	YER162C	MEC3	Q02574	474 aa		4.92	□□□□□ -1.62
RAD4	YER162C	RIM15	P43565	1770 aa		4.92	□□□□□ -1.62
RAD4	YER162C	YLL066C	Q99208	1374 aa		4.92	□□□□□ -1.62
RAD4	YER162C	LEU2	P04173	364 aa	Predicted RBP	4.92	□□□□□ -1.62
RAD4	YER162C	BUG1	Q12191	341 aa		4.91	□□□□□ -1.62
RAD4	YER162C	RLF2	Q12495	606 aa		4.91	□□□□□ -1.62
RAD4	YER162C	RAD4	P14736	754 aa		4.9	□□□□□ -1.62
RAD4	YER162C	CSE4	P36012	229 aa		4.9	□□□□□ -1.62
RAD4	YER162C	ERT1	P38140	529 aa		4.9	□□□□□ -1.63
RAD4	YER162C	CHZ1	P40019	153 aa	Predicted RBP	4.89	□□□□□ -1.63
RAD4	YER162C	YER156C	P40093	338 aa	Known RBP	4.89	□□□□□ -1.63
RAD4	YER162C	MSN5	P52918	1224 aa		4.89	□□□□□ -1.63
RAD4	YER162C	RPS24A	P0CX31	135 aa	Known RBP	4.89	□□□□□ -1.63
RAD4	YER162C	RPS24B	P0CX32	135 aa	Known RBP	4.89	□□□□□ -1.63
RAD4	YER162C	YKL222C	P35995	705 aa		4.89	□□□□□ -1.63
RAD4	YER162C	ORC1	P54784	914 aa	Predicted RBP	4.88	□□□□□ -1.63
RAD4	YER162C	KIN4	Q01919	800 aa		4.88	□□□□□ -1.63
RAD4	YER162C	FRK1	Q03002	865 aa	Predicted RBP	4.88	□□□□□ -1.63
RAD4	YER162C	POM152	P39685	1337 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms