RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W RTC1Q08281 1341 aa9.04□□□□□ -0.96
YRF1-1YDR545W PIL1P53252 339 aaKnown RBP9.04□□□□□ -0.96
YRF1-1YDR545W LTV1P34078 463 aa9.04□□□□□ -0.96
YRF1-1YDR545W CLB5P30283 435 aa9.03□□□□□ -0.96
YRF1-1YDR545W KRI1P42846 591 aaKnown RBP9.03□□□□□ -0.96
YRF1-1YDR545W TY3B-GQ99315 1547 aa9.02□□□□□ -0.96
YRF1-1YDR545W NUP157P40064 1391 aaKnown RBP9.02□□□□□ -0.97
YRF1-1YDR545W TRM3Q07527 1436 aa9.02□□□□□ -0.97
YRF1-1YDR545W NMD2P38798 1089 aaKnown RBP9.01□□□□□ -0.97
YRF1-1YDR545W BIK1P11709 440 aa9.01□□□□□ -0.97
YRF1-1YDR545W SNT2P53127 1403 aa9.01□□□□□ -0.97
YRF1-1YDR545W MSH4P40965 878 aaPredicted RBP9.01□□□□□ -0.97
YRF1-1YDR545W PDR5P33302 1511 aaKnown RBP9.01□□□□□ -0.97
YRF1-1YDR545W KNS1P32350 737 aaPredicted RBP9.01□□□□□ -0.97
YRF1-1YDR545W CYC8P14922 966 aa9□□□□□ -0.97
YRF1-1YDR545W CSE4P36012 229 aa9□□□□□ -0.97
YRF1-1YDR545W SPT2P06843 333 aaPredicted RBP9□□□□□ -0.97
YRF1-1YDR545W RAD50P12753 1312 aa9□□□□□ -0.97
YRF1-1YDR545W SPT21P35209 758 aa9□□□□□ -0.97
YRF1-1YDR545W TY3B-IQ7LHG5 1498 aaKnown RBP9□□□□□ -0.97
YRF1-1YDR545W YIL092WP40497 633 aa8.99□□□□□ -0.97
YRF1-1YDR545W CBF5P33322 483 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
YRF1-1YDR545W ETT1Q08421 412 aaKnown RBP8.99□□□□□ -0.97
YRF1-1YDR545W TRK1P12685 1235 aa8.99□□□□□ -0.97
YRF1-1YDR545W STU2P46675 888 aa8.98□□□□□ -0.97
YRF1-1YDR545W RAV1P47104 1357 aa8.98□□□□□ -0.97
YRF1-1YDR545W GDB1Q06625 1536 aa8.97□□□□□ -0.97
YRF1-1YDR545W ARO1P08566 1588 aaKnown RBP8.97□□□□□ -0.97
YRF1-1YDR545W RNR2P09938 399 aaKnown RBP8.97□□□□□ -0.97
YRF1-1YDR545W TAF8Q03750 510 aa8.97□□□□□ -0.97
YRF1-1YDR545W GIN4Q12263 1142 aa8.97□□□□□ -0.97
YRF1-1YDR545W RFC1P38630 861 aaKnown RBP8.97□□□□□ -0.97
YRF1-1YDR545W RAD9P14737 1309 aa8.97□□□□□ -0.97
YRF1-1YDR545W HAP5Q02516 242 aa8.96□□□□□ -0.97
YRF1-1YDR545W TAF13P11747 167 aa8.96□□□□□ -0.97
YRF1-1YDR545W MCM2P29469 868 aa8.96□□□□□ -0.97
YRF1-1YDR545W RPN12P32496 274 aa8.96□□□□□ -0.97
YRF1-1YDR545W DOS2P54858 310 aa8.96□□□□□ -0.97
YRF1-1YDR545W PRP3Q03338 469 aaPredicted RBP8.96□□□□□ -0.98
YRF1-1YDR545W SPC110P32380 944 aa8.95□□□□□ -0.98
YRF1-1YDR545W RVS167P39743 482 aaKnown RBP8.95□□□□□ -0.98
YRF1-1YDR545W DRS2P39524 1355 aa8.95□□□□□ -0.98
YRF1-1YDR545W PEX14P53112 341 aa8.95□□□□□ -0.98
YRF1-1YDR545W LTE1P07866 1435 aa8.95□□□□□ -0.98
YRF1-1YDR545W KEX1P09620 729 aa8.95□□□□□ -0.98
YRF1-1YDR545W HST1P53685 503 aa8.94□□□□□ -0.98
YRF1-1YDR545W UTP13Q05946 817 aaKnown RBP8.94□□□□□ -0.98
YRF1-1YDR545W DLD1P32891 587 aa8.94□□□□□ -0.98
YRF1-1YDR545W RKM3P38222 552 aa8.94□□□□□ -0.98
YRF1-1YDR545W FKH1P40466 484 aa8.94□□□□□ -0.98
YRF1-1YDR545W NOP8Q08287 484 aaPredicted RBP8.93□□□□□ -0.98
YRF1-1YDR545W SES1P07284 462 aaKnown RBP8.93□□□□□ -0.98
YRF1-1YDR545W SWE1P32944 819 aa8.93□□□□□ -0.98
YRF1-1YDR545W RTF1P53064 558 aa8.93□□□□□ -0.98
YRF1-1YDR545W BNR1P40450 1375 aa8.93□□□□□ -0.98
YRF1-1YDR545W NUP145P49687 1317 aa8.92□□□□□ -0.98
YRF1-1YDR545W SLD2P34252 453 aa8.92□□□□□ -0.98
YRF1-1YDR545W KRE5P22023 1365 aa8.92□□□□□ -0.98
YRF1-1YDR545W BDH2P39713 417 aa8.92□□□□□ -0.98
YRF1-1YDR545W CEP3P40969 608 aa8.91□□□□□ -0.98
YRF1-1YDR545W CIN4P39110 191 aa8.91□□□□□ -0.98
YRF1-1YDR545W ENV11P53246 860 aa8.91□□□□□ -0.98
YRF1-1YDR545W VPS20Q04272 221 aa8.91□□□□□ -0.98
YRF1-1YDR545W NKP2Q06162 153 aa8.91□□□□□ -0.98
YRF1-1YDR545W HSP82P02829 709 aaKnown RBP8.9□□□□□ -0.98
YRF1-1YDR545W RPN7Q06103 429 aaKnown RBP8.9□□□□□ -0.99
YRF1-1YDR545W MET5P47169 1442 aa8.9□□□□□ -0.99
YRF1-1YDR545W PRD1P25375 712 aa8.9□□□□□ -0.99
YRF1-1YDR545W DID4P36108 232 aa8.9□□□□□ -0.99
YRF1-1YDR545W YBT1P32386 1661 aa8.89□□□□□ -0.99
YRF1-1YDR545W TRP5P00931 707 aaKnown RBP8.89□□□□□ -0.99
YRF1-1YDR545W PBY1P38254 753 aa8.89□□□□□ -0.99
YRF1-1YDR545W NOP14Q99207 810 aaKnown RBP8.89□□□□□ -0.99
YRF1-1YDR545W MRPL10P36520 322 aa8.89□□□□□ -0.99
YRF1-1YDR545W YNG2P38806 282 aaKnown RBP8.89□□□□□ -0.99
YRF1-1YDR545W TIM50Q02776 476 aa8.89□□□□□ -0.99
YRF1-1YDR545W VAS1P07806 1104 aaKnown RBP8.88□□□□□ -0.99
YRF1-1YDR545W APC11Q12157 165 aa8.88□□□□□ -0.99
YRF1-1YDR545W BDP1P46678 594 aa8.87□□□□□ -0.99
YRF1-1YDR545W TPM1P17536 199 aaKnown RBP8.87□□□□□ -0.99
YRF1-1YDR545W GDT1P38301 280 aaPredicted RBP8.87□□□□□ -0.99
YRF1-1YDR545W PDI1P17967 522 aaKnown RBP8.87□□□□□ -0.99
YRF1-1YDR545W TY1B-DR3Q99231 1755 aa8.86□□□□□ -0.99
YRF1-1YDR545W PRP31P49704 494 aaPredicted RBP8.86□□□□□ -0.99
YRF1-1YDR545W GCR2Q01722 534 aa8.86□□□□□ -0.99
YRF1-1YDR545W SGD1Q06132 899 aa8.86□□□□□ -0.99
YRF1-1YDR545W THI22Q06490 572 aa8.86□□□□□ -0.99
YRF1-1YDR545W MRC1P25588 1096 aa8.85□□□□□ -0.99
YRF1-1YDR545W RTT107P38850 1070 aa8.85□□□□□ -0.99
YRF1-1YDR545W JIP3O13555 125 aa8.84□□□□□ -0.99
YRF1-1YDR545W YEF3P16521 1044 aaKnown RBP8.84□□□□□ -0.99
YRF1-1YDR545W ASF1P32447 279 aa8.84□□□□□ -0.99
YRF1-1YDR545W MRS2Q01926 470 aa8.84□□□□□ -0.99
YRF1-1YDR545W OSW7P43611 510 aa8.83□□□□□ -1
YRF1-1YDR545W NNF2P53253 936 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-LR1P0C2J3 1770 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-FP0CX63 1770 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-GR2P0CX64 1770 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-CP25384 1770 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-DR2Q03494 1770 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms