RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C TY1A-ER2P0CX66 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-GR3P0CX67 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-LR1P0CX68 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-MR2P0CX69 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-JR2P47099 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-DR1Q03856 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-ML1Q04706 440 aaKnown RBP7.08□□□□□ -1.28
SPG3YDR504C TUM1Q08686 304 aaKnown RBP7.08□□□□□ -1.28
SPG3YDR504C TY1A-BRQ12217 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-NL2Q12470 440 aa7.08□□□□□ -1.28
SPG3YDR504C TY1A-GR2Q12485 440 aa7.08□□□□□ -1.28
SPG3YDR504C ASH1P34233 588 aa7.07□□□□□ -1.28
SPG3YDR504C RRD1P40454 393 aaKnown RBP7.03□□□□□ -1.28
SPG3YDR504C RRN7P40992 514 aa7.03□□□□□ -1.28
SPG3YDR504C TFB4Q12004 338 aa7.03□□□□□ -1.28
SPG3YDR504C GAP1P19145 602 aaPredicted RBP7.01□□□□□ -1.29
SPG3YDR504C CSC1Q06538 782 aa7.01□□□□□ -1.29
SPG3YDR504C MET32Q12041 191 aa7.01□□□□□ -1.29
SPG3YDR504C AFT1P22149 690 aa6.99□□□□□ -1.29
SPG3YDR504C HST3P53687 447 aa6.99□□□□□ -1.29
SPG3YDR504C PAT1P25644 796 aaKnown RBP6.97□□□□□ -1.29
SPG3YDR504C YDR090CQ03193 310 aa6.95□□□□□ -1.3
SPG3YDR504C TRK2P28584 889 aa6.94□□□□□ -1.3
SPG3YDR504C KIC1P38692 1080 aa6.94□□□□□ -1.3
SPG3YDR504C CAF120P53836 1060 aa6.94□□□□□ -1.3
SPG3YDR504C SET1P38827 1080 aaKnown RBP6.93□□□□□ -1.3
SPG3YDR504C YJR115WP47152 169 aa6.93□□□□□ -1.3
SPG3YDR504C ACO2P39533 789 aa6.89□□□□□ -1.31
SPG3YDR504C YGR035CP53222 116 aa6.84□□□□□ -1.31
SPG3YDR504C PUS5Q06244 254 aa6.84□□□□□ -1.31
SPG3YDR504C MOD5P07884 428 aa6.82□□□□□ -1.32
SPG3YDR504C IFH1P39520 1085 aa6.81□□□□□ -1.32
SPG3YDR504C ORC6P38826 435 aa6.8□□□□□ -1.32
SPG3YDR504C ERF2Q06551 359 aa6.79□□□□□ -1.32
SPG3YDR504C MVP1P40959 511 aaKnown RBP6.78□□□□□ -1.32
SPG3YDR504C PAC1P39946 494 aaKnown RBP6.77□□□□□ -1.33
SPG3YDR504C HPF1Q05164 967 aa6.77□□□□□ -1.33
SPG3YDR504C OPT2Q06593 877 aa6.77□□□□□ -1.33
SPG3YDR504C KEX2P13134 814 aa6.76□□□□□ -1.33
SPG3YDR504C YPR109WQ06104 294 aa6.76□□□□□ -1.33
SPG3YDR504C ICP55P40051 511 aa6.74□□□□□ -1.33
SPG3YDR504C LSB3P43603 459 aaKnown RBP6.74□□□□□ -1.33
SPG3YDR504C YLR346CQ06139 101 aa6.73□□□□□ -1.33
SPG3YDR504C YIR007WP40566 764 aa6.72□□□□□ -1.33
SPG3YDR504C MSB3P48566 633 aaPredicted RBP6.72□□□□□ -1.33
SPG3YDR504C RGR1P19263 1082 aa6.68□□□□□ -1.34
SPG3YDR504C PUS1Q12211 544 aaKnown RBP6.68□□□□□ -1.34
SPG3YDR504C PTK2P47116 818 aaKnown RBP6.67□□□□□ -1.34
SPG3YDR504C REF2P42073 533 aaPredicted RBP6.66□□□□□ -1.34
SPG3YDR504C NRD1P53617 575 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SPG3YDR504C UGA3P26370 528 aa6.65□□□□□ -1.34
SPG3YDR504C GLY1P37303 387 aaKnown RBP6.65□□□□□ -1.34
SPG3YDR504C TUB4P53378 473 aa6.65□□□□□ -1.34
SPG3YDR504C AGE1Q04412 482 aa6.65□□□□□ -1.34
SPG3YDR504C SRF1Q12516 437 aa6.65□□□□□ -1.34
SPG3YDR504C YPR204WQ08995 1032 aa6.63□□□□□ -1.35
SPG3YDR504C SCW11P53189 542 aa6.62□□□□□ -1.35
SPG3YDR504C TY1A-BLQ12266 440 aa6.6□□□□□ -1.35
SPG3YDR504C NUP85P46673 744 aa6.58□□□□□ -1.36
SPG3YDR504C SYH1Q02875 849 aaKnown RBP6.58□□□□□ -1.36
SPG3YDR504C TYW1Q08960 810 aaKnown RBP6.58□□□□□ -1.36
SPG3YDR504C MIP1P15801 1254 aa6.57□□□□□ -1.36
SPG3YDR504C YPR148CQ06523 435 aa6.57□□□□□ -1.36
SPG3YDR504C COX6P00427 148 aa6.55□□□□□ -1.36
SPG3YDR504C MDJ1P35191 511 aa6.54□□□□□ -1.36
SPG3YDR504C PHM7Q12252 991 aa6.54□□□□□ -1.36
SPG3YDR504C KXD1P53158 218 aa6.52□□□□□ -1.37
SPG3YDR504C TPD3P31383 635 aa6.5□□□□□ -1.37
SPG3YDR504C HXT10P43581 546 aa6.5□□□□□ -1.37
SPG3YDR504C VPS70P47161 811 aa6.5□□□□□ -1.37
SPG3YDR504C MAK21Q12176 1025 aaKnown RBP6.5□□□□□ -1.37
SPG3YDR504C DPH6Q12429 685 aa6.49□□□□□ -1.37
SPG3YDR504C RTF1P53064 558 aa6.44□□□□□ -1.38
SPG3YDR504C YNL115CP53925 644 aa6.44□□□□□ -1.38
SPG3YDR504C UBP2Q01476 1272 aa6.44□□□□□ -1.38
SPG3YDR504C KIP2P28743 706 aa6.42□□□□□ -1.38
SPG3YDR504C LSC2P53312 427 aa6.42□□□□□ -1.38
SPG3YDR504C PDC1P06169 563 aaKnown RBP6.41□□□□□ -1.38
SPG3YDR504C MRT4P33201 236 aaKnown RBP6.41□□□□□ -1.38
SPG3YDR504C ROG3P43602 733 aa6.4□□□□□ -1.38
SPG3YDR504C CCT8P47079 568 aaKnown RBP6.4□□□□□ -1.38
SPG3YDR504C NSG2P53898 299 aa6.39□□□□□ -1.39
SPG3YDR504C TY1A-MR1Q04215 440 aa6.39□□□□□ -1.39
SPG3YDR504C IXR1P33417 597 aa6.37□□□□□ -1.39
SPG3YDR504C RTT106P40161 455 aa6.37□□□□□ -1.39
SPG3YDR504C LYS5P50113 272 aa6.37□□□□□ -1.39
SPG3YDR504C CCP1P00431 361 aa6.35□□□□□ -1.39
SPG3YDR504C ARG82P07250 355 aa6.35□□□□□ -1.39
SPG3YDR504C OSH7P38755 437 aa6.35□□□□□ -1.39
SPG3YDR504C THI72Q08579 599 aa6.35□□□□□ -1.39
SPG3YDR504C TCB1Q12466 1186 aa6.35□□□□□ -1.39
SPG3YDR504C PSE1P32337 1089 aaKnown RBP6.34□□□□□ -1.39
SPG3YDR504C YJR098CP47139 656 aa6.34□□□□□ -1.39
SPG3YDR504C SBP1P10080 294 aaKnown RBP6.33□□□□□ -1.4
SPG3YDR504C AAD14P42884 376 aa6.33□□□□□ -1.4
SPG3YDR504C CLB5P30283 435 aa6.32□□□□□ -1.4
SPG3YDR504C DLD1P32891 587 aa6.32□□□□□ -1.4
SPG3YDR504C SIT4P20604 311 aa6.31□□□□□ -1.4
SPG3YDR504C JJJ3P47138 172 aa6.31□□□□□ -1.4
SPG3YDR504C YFL066CP43538 392 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 96.7 ms