RNA–Protein interactions for RNA: YDR418W

RPL12B, Transcript of Ribosomal 60S subunit protein L12B, yeast

Gene RPL12B, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL12B	YDR418W	GTT3	P39996	337 aa		11.53	□□□□□ -0.56
RPL12B	YDR418W	FAP1	P53971	965 aa		11.52	□□□□□ -0.57
RPL12B	YDR418W	RAD9	P14737	1309 aa		11.5	□□□□□ -0.57
RPL12B	YDR418W	YJL181W	P46987	611 aa		11.49	□□□□□ -0.57
RPL12B	YDR418W	ALD2	P47771	506 aa		11.49	□□□□□ -0.57
RPL12B	YDR418W	SSA2	P10592	639 aa	Known RBP	11.47	□□□□□ -0.57
RPL12B	YDR418W	ALD4	P46367	519 aa	Known RBP	11.47	□□□□□ -0.57
RPL12B	YDR418W	LYS4	P49367	693 aa	Predicted RBP	11.45	□□□□□ -0.58
RPL12B	YDR418W	URB1	P34241	1764 aa	Known RBP	11.45	□□□□□ -0.58
RPL12B	YDR418W	EDE1	P34216	1381 aa		11.44	□□□□□ -0.58
RPL12B	YDR418W	DOT5	P40553	215 aa		11.44	□□□□□ -0.58
RPL12B	YDR418W	PRP5	P21372	849 aa	Predicted RBP	11.43	□□□□□ -0.58
RPL12B	YDR418W	PAF1	P38351	445 aa		11.43	□□□□□ -0.58
RPL12B	YDR418W	NAP1	P25293	417 aa	Known RBP	11.39	□□□□□ -0.59
RPL12B	YDR418W	NPR2	P39923	615 aa		11.39	□□□□□ -0.59
RPL12B	YDR418W	TY4B-H	P0C2J7	1802 aa		11.38	□□□□□ -0.59
RPL12B	YDR418W	TY4B-J	P47024	1803 aa		11.38	□□□□□ -0.59
RPL12B	YDR418W	IES2	P40154	320 aa		11.38	□□□□□ -0.59
RPL12B	YDR418W	PSK1	P31374	1356 aa		11.38	□□□□□ -0.59
RPL12B	YDR418W	RAV1	P47104	1357 aa		11.38	□□□□□ -0.59
RPL12B	YDR418W	PRP40	P33203	583 aa	Known RBP	11.36	□□□□□ -0.59
RPL12B	YDR418W	LAM6	Q08001	693 aa		11.36	□□□□□ -0.59
RPL12B	YDR418W	CPS1	P27614	576 aa		11.35	□□□□□ -0.59
RPL12B	YDR418W	FOX2	Q02207	900 aa	Known RBP	11.35	□□□□□ -0.59
RPL12B	YDR418W	ROM2	P51862	1356 aa	Known RBP	11.35	□□□□□ -0.59
RPL12B	YDR418W	FKS3	Q04952	1785 aa		11.34	□□□□□ -0.59
RPL12B	YDR418W	MSB3	P48566	633 aa	Predicted RBP	11.33	□□□□□ -0.6
RPL12B	YDR418W	CTH1	P47976	325 aa		11.31	□□□□□ -0.6
RPL12B	YDR418W	RCM1	P53972	490 aa		11.31	□□□□□ -0.6
RPL12B	YDR418W	IKI3	Q06706	1349 aa	Known RBP	11.31	□□□□□ -0.6
RPL12B	YDR418W	YEF3	P16521	1044 aa	Known RBP	11.29	□□□□□ -0.6
RPL12B	YDR418W	TCB1	Q12466	1186 aa		11.29	□□□□□ -0.6
RPL12B	YDR418W	BFR2	Q06631	534 aa	Known RBP	11.28	□□□□□ -0.6
RPL12B	YDR418W	RTC1	Q08281	1341 aa		11.28	□□□□□ -0.6
RPL12B	YDR418W	SSM4	P40318	1319 aa		11.27	□□□□□ -0.61
RPL12B	YDR418W	RSF2	P46974	1380 aa		11.25	□□□□□ -0.61
RPL12B	YDR418W	RPG1	P38249	964 aa	Known RBP	11.24	□□□□□ -0.61
RPL12B	YDR418W	ENP1	P38333	483 aa	Known RBP	11.24	□□□□□ -0.61
RPL12B	YDR418W	TAF8	Q03750	510 aa		11.22	□□□□□ -0.61
RPL12B	YDR418W	COB	P00163	385 aa		11.21	□□□□□ -0.61
RPL12B	YDR418W	YRF1-3	P0CX14	1859 aa		11.21	□□□□□ -0.62
RPL12B	YDR418W	YRF1-7	P0CX15	1859 aa		11.21	□□□□□ -0.62
RPL12B	YDR418W	YRF1-6	P53819	1859 aa		11.21	□□□□□ -0.62
RPL12B	YDR418W	YKL133C	P36066	463 aa		11.2	□□□□□ -0.62
RPL12B	YDR418W	PPH3	P32345	308 aa		11.19	□□□□□ -0.62
RPL12B	YDR418W	SPT7	P35177	1332 aa		11.16	□□□□□ -0.62
RPL12B	YDR418W	ALD3	P54114	506 aa		11.16	□□□□□ -0.62
RPL12B	YDR418W	SLM3	Q12093	417 aa		11.16	□□□□□ -0.62
RPL12B	YDR418W	ADE6	P38972	1358 aa	Known RBP	11.16	□□□□□ -0.62
RPL12B	YDR418W	YKR075C	P36155	307 aa		11.15	□□□□□ -0.62
RPL12B	YDR418W	YRF1-4	O13559	1382 aa		11.15	□□□□□ -0.63
RPL12B	YDR418W	BDF1	P35817	686 aa		11.13	□□□□□ -0.63
RPL12B	YDR418W	NOP7	P53261	605 aa	Known RBP	11.13	□□□□□ -0.63
RPL12B	YDR418W	EAF6	P47128	113 aa		11.11	□□□□□ -0.63
RPL12B	YDR418W	ESL2	P36168	1195 aa		11.09	□□□□□ -0.63
RPL12B	YDR418W	XKS1	P42826	600 aa		11.09	□□□□□ -0.63
RPL12B	YDR418W	SAP155	P43612	1002 aa		11.08	□□□□□ -0.64
RPL12B	YDR418W	CSE4	P36012	229 aa		11.07	□□□□□ -0.64
RPL12B	YDR418W	SNF2	P22082	1703 aa		11.06	□□□□□ -0.64
RPL12B	YDR418W	SSA4	P22202	642 aa	Known RBP	11.06	□□□□□ -0.64
RPL12B	YDR418W	PEX21	P50091	288 aa		11.04	□□□□□ -0.64
RPL12B	YDR418W	SQS1	P53866	767 aa	Known RBP	11.03	□□□□□ -0.64
RPL12B	YDR418W	MSN5	P52918	1224 aa		11.02	□□□□□ -0.65
RPL12B	YDR418W	RPS24A	P0CX31	135 aa	Known RBP	11.01	□□□□□ -0.65
RPL12B	YDR418W	RPS24B	P0CX32	135 aa	Known RBP	11.01	□□□□□ -0.65
RPL12B	YDR418W	MSB4	Q12317	492 aa		11.01	□□□□□ -0.65
RPL12B	YDR418W	CHZ1	P40019	153 aa	Predicted RBP	11	□□□□□ -0.65
RPL12B	YDR418W	FRK1	Q03002	865 aa	Predicted RBP	11	□□□□□ -0.65
RPL12B	YDR418W	BUG1	Q12191	341 aa		11	□□□□□ -0.65
RPL12B	YDR418W	APC1	P53886	1748 aa		11	□□□□□ -0.65
RPL12B	YDR418W	YER156C	P40093	338 aa	Known RBP	10.99	□□□□□ -0.65
RPL12B	YDR418W	HPC2	Q01448	625 aa		10.98	□□□□□ -0.65
RPL12B	YDR418W	MEC3	Q02574	474 aa		10.98	□□□□□ -0.65
RPL12B	YDR418W	LEU2	P04173	364 aa	Predicted RBP	10.97	□□□□□ -0.65
RPL12B	YDR418W	CTT1	P06115	562 aa		10.97	□□□□□ -0.65
RPL12B	YDR418W	MTR4	P47047	1073 aa	Known RBP	10.97	□□□□□ -0.65
RPL12B	YDR418W	PUS5	Q06244	254 aa		10.97	□□□□□ -0.65
RPL12B	YDR418W	PRP43	P53131	767 aa	Known RBP	10.96	□□□□□ -0.65
RPL12B	YDR418W	YIL177C	P40434	1758 aa		10.94	□□□□□ -0.66
RPL12B	YDR418W	YJL225C	P40889	1758 aa		10.94	□□□□□ -0.66
RPL12B	YDR418W	TOM1	Q03280	3268 aa		10.94	□□□□□ -0.66
RPL12B	YDR418W	RIM15	P43565	1770 aa		10.93	□□□□□ -0.66
RPL12B	YDR418W	TOS1	P38288	455 aa		10.92	□□□□□ -0.66
RPL12B	YDR418W	RRT14	P40470	206 aa		10.91	□□□□□ -0.66
RPL12B	YDR418W	UTP22	P53254	1237 aa	Predicted RBP	10.91	□□□□□ -0.66
RPL12B	YDR418W	SPE2	P21182	396 aa		10.9	□□□□□ -0.66
RPL12B	YDR418W	YKL222C	P35995	705 aa		10.89	□□□□□ -0.67
RPL12B	YDR418W	YLR419W	Q06698	1435 aa	Known RBP	10.89	□□□□□ -0.67
RPL12B	YDR418W	MHP1	P43638	1398 aa		10.89	□□□□□ -0.67
RPL12B	YDR418W	ADE16	P54113	591 aa	Known RBP	10.88	□□□□□ -0.67
RPL12B	YDR418W	ATG13	Q06628	738 aa		10.88	□□□□□ -0.67
RPL12B	YDR418W	CWH41	P53008	833 aa		10.87	□□□□□ -0.67
RPL12B	YDR418W	GRE2	Q12068	342 aa	Known RBP	10.87	□□□□□ -0.67
RPL12B	YDR418W	RAD4	P14736	754 aa		10.86	□□□□□ -0.67
RPL12B	YDR418W	RCR1	P38212	213 aa		10.85	□□□□□ -0.67
RPL12B	YDR418W	KIN4	Q01919	800 aa		10.85	□□□□□ -0.67
RPL12B	YDR418W	KIP3	P53086	805 aa	Known RBP	10.83	□□□□□ -0.68
RPL12B	YDR418W	RPO41	P13433	1351 aa	Known RBP	10.82	□□□□□ -0.68
RPL12B	YDR418W	FPK1	P53739	893 aa		10.82	□□□□□ -0.68
RPL12B	YDR418W	SIR4	P11978	1358 aa		10.81	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms