RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A TY1A-ER2P0CX66 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-GR3P0CX67 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-LR1P0CX68 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-MR2P0CX69 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A SEC2P17065 759 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-JR2P47099 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-DR1Q03856 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-ML1Q04706 440 aaKnown RBP5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-BRQ12217 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-NL2Q12470 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A TY1A-GR2Q12485 440 aa5.75□□□□□ -1.49
SDH6YDR379C-A ASH1P34233 588 aa5.74□□□□□ -1.49
SDH6YDR379C-A TFB4Q12004 338 aa5.74□□□□□ -1.49
SDH6YDR379C-A RRN7P40992 514 aa5.73□□□□□ -1.49
SDH6YDR379C-A PAT1P25644 796 aaKnown RBP5.71□□□□□ -1.5
SDH6YDR379C-A RRD1P40454 393 aaKnown RBP5.71□□□□□ -1.5
SDH6YDR379C-A CSC1Q06538 782 aa5.71□□□□□ -1.5
SDH6YDR379C-A GAP1P19145 602 aaPredicted RBP5.7□□□□□ -1.5
SDH6YDR379C-A KIC1P38692 1080 aa5.7□□□□□ -1.5
SDH6YDR379C-A HST3P53687 447 aa5.7□□□□□ -1.5
SDH6YDR379C-A AFT1P22149 690 aa5.69□□□□□ -1.5
SDH6YDR379C-A MET32Q12041 191 aa5.69□□□□□ -1.5
SDH6YDR379C-A YDR090CQ03193 310 aa5.66□□□□□ -1.5
SDH6YDR379C-A CAF120P53836 1060 aa5.65□□□□□ -1.5
SDH6YDR379C-A SET1P38827 1080 aaKnown RBP5.63□□□□□ -1.51
SDH6YDR379C-A TRK2P28584 889 aa5.62□□□□□ -1.51
SDH6YDR379C-A YJR115WP47152 169 aa5.62□□□□□ -1.51
SDH6YDR379C-A IFH1P39520 1085 aa5.59□□□□□ -1.51
SDH6YDR379C-A ACO2P39533 789 aa5.58□□□□□ -1.52
SDH6YDR379C-A YGR035CP53222 116 aa5.57□□□□□ -1.52
SDH6YDR379C-A PUS5Q06244 254 aa5.57□□□□□ -1.52
SDH6YDR379C-A ORC6P38826 435 aa5.55□□□□□ -1.52
SDH6YDR379C-A MOD5P07884 428 aa5.53□□□□□ -1.52
SDH6YDR379C-A MVP1P40959 511 aaKnown RBP5.52□□□□□ -1.53
SDH6YDR379C-A YPR109WQ06104 294 aa5.52□□□□□ -1.53
SDH6YDR379C-A KEX2P13134 814 aa5.51□□□□□ -1.53
SDH6YDR379C-A PAC1P39946 494 aaKnown RBP5.51□□□□□ -1.53
SDH6YDR379C-A ERF2Q06551 359 aa5.51□□□□□ -1.53
SDH6YDR379C-A OPT2Q06593 877 aa5.51□□□□□ -1.53
SDH6YDR379C-A HPF1Q05164 967 aa5.5□□□□□ -1.53
SDH6YDR379C-A MSB3P48566 633 aaPredicted RBP5.49□□□□□ -1.53
SDH6YDR379C-A YLR346CQ06139 101 aa5.49□□□□□ -1.53
SDH6YDR379C-A ICP55P40051 511 aa5.46□□□□□ -1.54
SDH6YDR379C-A YIR007WP40566 764 aa5.46□□□□□ -1.54
SDH6YDR379C-A LSB3P43603 459 aaKnown RBP5.46□□□□□ -1.54
SDH6YDR379C-A SRF1Q12516 437 aa5.45□□□□□ -1.54
SDH6YDR379C-A PUS1Q12211 544 aaKnown RBP5.44□□□□□ -1.54
SDH6YDR379C-A RGR1P19263 1082 aa5.43□□□□□ -1.54
SDH6YDR379C-A UGA3P26370 528 aa5.43□□□□□ -1.54
SDH6YDR379C-A REF2P42073 533 aaPredicted RBP5.43□□□□□ -1.54
SDH6YDR379C-A PTK2P47116 818 aaKnown RBP5.43□□□□□ -1.54
SDH6YDR379C-A GLY1P37303 387 aaKnown RBP5.41□□□□□ -1.54
SDH6YDR379C-A TUB4P53378 473 aa5.41□□□□□ -1.54
SDH6YDR379C-A NRD1P53617 575 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SDH6YDR379C-A YPR204WQ08995 1032 aa5.41□□□□□ -1.54
SDH6YDR379C-A AGE1Q04412 482 aa5.4□□□□□ -1.54
SDH6YDR379C-A SCW11P53189 542 aa5.39□□□□□ -1.55
SDH6YDR379C-A SYH1Q02875 849 aaKnown RBP5.37□□□□□ -1.55
SDH6YDR379C-A TYW1Q08960 810 aaKnown RBP5.37□□□□□ -1.55
SDH6YDR379C-A TY1A-BLQ12266 440 aa5.36□□□□□ -1.55
SDH6YDR379C-A MIP1P15801 1254 aa5.35□□□□□ -1.55
SDH6YDR379C-A NUP85P46673 744 aa5.35□□□□□ -1.55
SDH6YDR379C-A COX6P00427 148 aa5.34□□□□□ -1.55
SDH6YDR379C-A KXD1P53158 218 aa5.33□□□□□ -1.56
SDH6YDR379C-A PHM7Q12252 991 aa5.33□□□□□ -1.56
SDH6YDR379C-A TPD3P31383 635 aa5.31□□□□□ -1.56
SDH6YDR379C-A MAK21Q12176 1025 aaKnown RBP5.31□□□□□ -1.56
SDH6YDR379C-A HXT10P43581 546 aa5.3□□□□□ -1.56
SDH6YDR379C-A MDJ1P35191 511 aa5.29□□□□□ -1.56
SDH6YDR379C-A DPH6Q12429 685 aa5.29□□□□□ -1.56
SDH6YDR379C-A RTF1P53064 558 aa5.27□□□□□ -1.57
SDH6YDR379C-A KIP2P28743 706 aa5.26□□□□□ -1.57
SDH6YDR379C-A YNL115CP53925 644 aa5.26□□□□□ -1.57
SDH6YDR379C-A UBP2Q01476 1272 aa5.25□□□□□ -1.57
SDH6YDR379C-A LSC2P53312 427 aa5.24□□□□□ -1.57
SDH6YDR379C-A PDC1P06169 563 aaKnown RBP5.23□□□□□ -1.57
SDH6YDR379C-A YPR148CQ06523 435 aa5.23□□□□□ -1.57
SDH6YDR379C-A RTT106P40161 455 aa5.22□□□□□ -1.57
SDH6YDR379C-A ROG3P43602 733 aa5.22□□□□□ -1.57
SDH6YDR379C-A NSG2P53898 299 aa5.22□□□□□ -1.57
SDH6YDR379C-A MRT4P33201 236 aaKnown RBP5.21□□□□□ -1.58
SDH6YDR379C-A IXR1P33417 597 aa5.21□□□□□ -1.58
SDH6YDR379C-A CLB5P30283 435 aa5.2□□□□□ -1.58
SDH6YDR379C-A ARG82P07250 355 aa5.19□□□□□ -1.58
SDH6YDR379C-A LYS5P50113 272 aa5.19□□□□□ -1.58
SDH6YDR379C-A TY1A-MR1Q04215 440 aa5.19□□□□□ -1.58
SDH6YDR379C-A CCT8P47079 568 aaKnown RBP5.18□□□□□ -1.58
SDH6YDR379C-A PSE1P32337 1089 aaKnown RBP5.17□□□□□ -1.58
SDH6YDR379C-A TCB1Q12466 1186 aa5.17□□□□□ -1.58
SDH6YDR379C-A SBP1P10080 294 aaKnown RBP5.16□□□□□ -1.58
SDH6YDR379C-A OSH7P38755 437 aa5.16□□□□□ -1.58
SDH6YDR379C-A AAD14P42884 376 aa5.16□□□□□ -1.58
SDH6YDR379C-A VPS70P47161 811 aa5.16□□□□□ -1.58
SDH6YDR379C-A THI72Q08579 599 aa5.16□□□□□ -1.58
SDH6YDR379C-A CCP1P00431 361 aa5.15□□□□□ -1.59
SDH6YDR379C-A DLD1P32891 587 aa5.15□□□□□ -1.59
SDH6YDR379C-A YJR098CP47139 656 aa5.15□□□□□ -1.59
SDH6YDR379C-A SIT4P20604 311 aa5.14□□□□□ -1.59
SDH6YDR379C-A JJJ3P47138 172 aa5.14□□□□□ -1.59
SDH6YDR379C-A ALR1Q08269 859 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms