RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W HTA1P04911 132 aaKnown RBP6.71□□□□□ -1.34
UBC1YDR177W HTA2P04912 132 aa6.71□□□□□ -1.34
UBC1YDR177W MPH3P0CE00 602 aa6.71□□□□□ -1.34
UBC1YDR177W DCW1P36091 449 aa6.71□□□□□ -1.34
UBC1YDR177W RIM21P48565 533 aa6.71□□□□□ -1.34
UBC1YDR177W YML083CQ04526 418 aa6.71□□□□□ -1.34
UBC1YDR177W MRX10Q05648 414 aa6.71□□□□□ -1.34
UBC1YDR177W BUD31P25337 157 aaPredicted RBP6.7□□□□□ -1.34
UBC1YDR177W YJU3P28321 313 aa6.7□□□□□ -1.34
UBC1YDR177W TGL3P40308 642 aa6.7□□□□□ -1.34
UBC1YDR177W NAF1P53919 492 aaKnown RBP6.7□□□□□ -1.34
UBC1YDR177W GAP1P19145 602 aaPredicted RBP6.69□□□□□ -1.34
UBC1YDR177W SIT4P20604 311 aa6.69□□□□□ -1.34
UBC1YDR177W SCJ1P25303 377 aa6.69□□□□□ -1.34
UBC1YDR177W YDJ1P25491 409 aaKnown RBP6.68□□□□□ -1.34
UBC1YDR177W SVF1Q05515 481 aa6.68□□□□□ -1.34
UBC1YDR177W YTA7P40340 1379 aa6.68□□□□□ -1.34
UBC1YDR177W SLY41P22215 453 aa6.67□□□□□ -1.34
UBC1YDR177W RTF1P53064 558 aa6.66□□□□□ -1.34
UBC1YDR177W YBL113CQ7M4S9 792 aa6.66□□□□□ -1.34
UBC1YDR177W ECM23Q02710 187 aa6.65□□□□□ -1.34
UBC1YDR177W SLI15P38283 698 aa6.64□□□□□ -1.35
UBC1YDR177W IPL1P38991 367 aa6.64□□□□□ -1.35
UBC1YDR177W ATG3P40344 310 aa6.64□□□□□ -1.35
UBC1YDR177W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
UBC1YDR177W KAR5Q04746 504 aa6.64□□□□□ -1.35
UBC1YDR177W ENV9Q08651 330 aa6.64□□□□□ -1.35
UBC1YDR177W MSC6Q08818 692 aaKnown RBP6.64□□□□□ -1.35
UBC1YDR177W RSC30P38781 883 aa6.63□□□□□ -1.35
UBC1YDR177W YNL115CP53925 644 aa6.63□□□□□ -1.35
UBC1YDR177W NST1P53935 1240 aa6.63□□□□□ -1.35
UBC1YDR177W YOL036WQ08206 761 aa6.63□□□□□ -1.35
UBC1YDR177W GAL2P13181 574 aa6.62□□□□□ -1.35
UBC1YDR177W PEP12P32854 288 aa6.62□□□□□ -1.35
UBC1YDR177W UBX7P38349 436 aa6.62□□□□□ -1.35
UBC1YDR177W DAN4P47179 1161 aa6.62□□□□□ -1.35
UBC1YDR177W TBF1Q02457 562 aa6.62□□□□□ -1.35
UBC1YDR177W FPR4Q06205 392 aaPredicted RBP6.62□□□□□ -1.35
UBC1YDR177W TUM1Q08686 304 aaKnown RBP6.62□□□□□ -1.35
UBC1YDR177W MCM16Q12262 181 aa6.62□□□□□ -1.35
UBC1YDR177W BRN1P38170 754 aa6.61□□□□□ -1.35
UBC1YDR177W KTR7P40504 517 aa6.61□□□□□ -1.35
UBC1YDR177W NNF1P47149 201 aa6.61□□□□□ -1.35
UBC1YDR177W PUF6Q04373 656 aaKnown RBP6.61□□□□□ -1.35
UBC1YDR177W MSB4Q12317 492 aa6.61□□□□□ -1.35
UBC1YDR177W ERP5P38819 212 aa6.6□□□□□ -1.35
UBC1YDR177W POL32P47110 350 aa6.6□□□□□ -1.35
UBC1YDR177W PUS6P53294 404 aa6.6□□□□□ -1.35
UBC1YDR177W PPX1P38698 397 aa6.59□□□□□ -1.35
UBC1YDR177W SET4P42948 560 aa6.59□□□□□ -1.35
UBC1YDR177W TRM1P15565 570 aaKnown RBP6.58□□□□□ -1.36
UBC1YDR177W MGE1P38523 228 aa6.58□□□□□ -1.36
UBC1YDR177W ILV3P39522 585 aaKnown RBP6.58□□□□□ -1.36
UBC1YDR177W YEL023CP39992 682 aa6.58□□□□□ -1.36
UBC1YDR177W THI12P42883 340 aa6.58□□□□□ -1.36
UBC1YDR177W THI5P43534 340 aa6.58□□□□□ -1.36
UBC1YDR177W THI11P47183 340 aa6.58□□□□□ -1.36
UBC1YDR177W THI13Q07748 340 aa6.58□□□□□ -1.36
UBC1YDR177W YEL077CQ3E7X8 1277 aa6.58□□□□□ -1.36
UBC1YDR177W HAP4P14064 554 aa6.57□□□□□ -1.36
UBC1YDR177W YHL050CP38721 697 aa6.57□□□□□ -1.36
UBC1YDR177W YHR219WP38900 624 aa6.57□□□□□ -1.36
UBC1YDR177W CDC73Q06697 393 aa6.57□□□□□ -1.36
UBC1YDR177W GRS1P38088 690 aaKnown RBP6.56□□□□□ -1.36
UBC1YDR177W OCA5P38738 679 aa6.56□□□□□ -1.36
UBC1YDR177W ALD2P47771 506 aa6.56□□□□□ -1.36
UBC1YDR177W DOS2P54858 310 aa6.56□□□□□ -1.36
UBC1YDR177W MST1P07236 462 aa6.55□□□□□ -1.36
UBC1YDR177W PHO87P25360 923 aa6.55□□□□□ -1.36
UBC1YDR177W EAP1P36041 632 aaKnown RBP6.55□□□□□ -1.36
UBC1YDR177W ATG1P53104 897 aa6.55□□□□□ -1.36
UBC1YDR177W FUR4P05316 633 aaKnown RBP6.54□□□□□ -1.36
UBC1YDR177W PTC4P38089 393 aa6.54□□□□□ -1.36
UBC1YDR177W YRR1Q12172 810 aa6.54□□□□□ -1.36
UBC1YDR177W RDS2P19541 446 aaKnown RBP6.53□□□□□ -1.36
UBC1YDR177W NPL4P33755 580 aa6.53□□□□□ -1.36
UBC1YDR177W EMP47P43555 445 aa6.53□□□□□ -1.36
UBC1YDR177W STE20Q03497 939 aaKnown RBP6.53□□□□□ -1.36
UBC1YDR177W CWC15Q03772 175 aaKnown RBP6.53□□□□□ -1.36
UBC1YDR177W DPL1Q05567 589 aa6.53□□□□□ -1.36
UBC1YDR177W SPT2P06843 333 aaPredicted RBP6.52□□□□□ -1.37
UBC1YDR177W GUT2P32191 649 aa6.52□□□□□ -1.37
UBC1YDR177W UTP13Q05946 817 aaKnown RBP6.52□□□□□ -1.37
UBC1YDR177W TEC1P18412 486 aa6.51□□□□□ -1.37
UBC1YDR177W NMD2P38798 1089 aaKnown RBP6.51□□□□□ -1.37
UBC1YDR177W JIP4Q03361 876 aa6.51□□□□□ -1.37
UBC1YDR177W PNP1Q05788 311 aa6.51□□□□□ -1.37
UBC1YDR177W RRP15Q06511 250 aaPredicted RBP6.51□□□□□ -1.37
UBC1YDR177W TRL1P09880 827 aaKnown RBP6.5□□□□□ -1.37
UBC1YDR177W SRS2P12954 1174 aa6.5□□□□□ -1.37
UBC1YDR177W ISF1P32488 338 aa6.5□□□□□ -1.37
UBC1YDR177W GAS4Q08271 471 aa6.5□□□□□ -1.37
UBC1YDR177W MDJ2P42834 146 aa6.49□□□□□ -1.37
UBC1YDR177W ACF4P47129 309 aa6.49□□□□□ -1.37
UBC1YDR177W YAF9P53930 226 aa6.49□□□□□ -1.37
UBC1YDR177W OYE2Q03558 400 aaKnown RBP6.49□□□□□ -1.37
UBC1YDR177W PUN1Q06991 263 aa6.49□□□□□ -1.37
UBC1YDR177W ISU2Q12056 156 aa6.49□□□□□ -1.37
UBC1YDR177W VAN1P23642 535 aa6.48□□□□□ -1.37
UBC1YDR177W YFL034WP43564 1073 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms