RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W SPB4P25808 606 aaPredicted RBP4.89□□□□□ -1.63
VPS41YDR080W TFB4Q12004 338 aa4.89□□□□□ -1.63
VPS41YDR080W PSE1P32337 1089 aaKnown RBP4.89□□□□□ -1.63
VPS41YDR080W SEC2P17065 759 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-DR4O74302 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-HP0C2I4 478 aaKnown RBP4.88□□□□□ -1.63
VPS41YDR080W TY1A-AP0CX57 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-PR1P0CX58 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-ORP0CX59 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-PR2P0CX60 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-DR5P0CX65 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-ER2P0CX66 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-GR3P0CX67 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-LR1P0CX68 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-MR2P0CX69 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-JR2P47099 440 aa4.88□□□□□ -1.63
VPS41YDR080W ISM1P48526 1002 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-DR1Q03856 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-ML1Q04706 440 aaKnown RBP4.88□□□□□ -1.63
VPS41YDR080W BUD20Q08004 166 aaPredicted RBP4.88□□□□□ -1.63
VPS41YDR080W TY1A-BRQ12217 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-NL2Q12470 440 aa4.88□□□□□ -1.63
VPS41YDR080W TY1A-GR2Q12485 440 aa4.88□□□□□ -1.63
VPS41YDR080W YPR109WQ06104 294 aa4.87□□□□□ -1.63
VPS41YDR080W MYO2P19524 1574 aaKnown RBP4.87□□□□□ -1.63
VPS41YDR080W XDJ1P39102 459 aa4.86□□□□□ -1.63
VPS41YDR080W NUD1P32336 851 aa4.85□□□□□ -1.63
VPS41YDR080W ERF2Q06551 359 aa4.85□□□□□ -1.63
VPS41YDR080W RPP1BP10622 106 aaKnown RBP4.83□□□□□ -1.64
VPS41YDR080W MET5P47169 1442 aa4.83□□□□□ -1.64
VPS41YDR080W PEX21P50091 288 aa4.82□□□□□ -1.64
VPS41YDR080W NIS1P53939 407 aa4.82□□□□□ -1.64
VPS41YDR080W LTE1P07866 1435 aa4.81□□□□□ -1.64
VPS41YDR080W ESP1Q03018 1630 aa4.81□□□□□ -1.64
VPS41YDR080W LEU3P08638 886 aa4.8□□□□□ -1.64
VPS41YDR080W GLC3P32775 704 aa4.8□□□□□ -1.64
VPS41YDR080W AGE1Q04412 482 aa4.8□□□□□ -1.64
VPS41YDR080W SIT4P20604 311 aa4.8□□□□□ -1.64
VPS41YDR080W KEX2P13134 814 aa4.79□□□□□ -1.64
VPS41YDR080W YNR021WP53723 404 aaKnown RBP4.79□□□□□ -1.64
VPS41YDR080W CDC25P04821 1589 aa4.78□□□□□ -1.64
VPS41YDR080W ESC1Q03661 1658 aaKnown RBP4.78□□□□□ -1.64
VPS41YDR080W PRT1P06103 763 aaKnown RBP4.77□□□□□ -1.65
VPS41YDR080W TEA1P47988 759 aa4.77□□□□□ -1.65
VPS41YDR080W RKR1Q04781 1562 aa4.77□□□□□ -1.65
VPS41YDR080W RPA190P10964 1664 aaKnown RBP4.77□□□□□ -1.65
VPS41YDR080W RAS1P01119 309 aa4.77□□□□□ -1.65
VPS41YDR080W FPK1P53739 893 aa4.76□□□□□ -1.65
VPS41YDR080W SRC1Q03707 834 aa4.76□□□□□ -1.65
VPS41YDR080W SKI3P17883 1432 aaKnown RBP4.75□□□□□ -1.65
VPS41YDR080W YPK9Q12697 1472 aa4.75□□□□□ -1.65
VPS41YDR080W KTR1P27810 393 aaKnown RBP4.75□□□□□ -1.65
VPS41YDR080W CLB5P30283 435 aa4.75□□□□□ -1.65
VPS41YDR080W GYP1Q08484 637 aa4.74□□□□□ -1.65
VPS41YDR080W SCC2Q04002 1493 aa4.74□□□□□ -1.65
VPS41YDR080W AIM7Q12156 149 aa4.74□□□□□ -1.65
VPS41YDR080W UFD4P33202 1483 aa4.74□□□□□ -1.65
VPS41YDR080W BNI1P41832 1953 aa4.74□□□□□ -1.65
VPS41YDR080W SCJ1P25303 377 aa4.74□□□□□ -1.65
VPS41YDR080W GCD11P32481 527 aaKnown RBP4.74□□□□□ -1.65
VPS41YDR080W PAC1P39946 494 aaKnown RBP4.74□□□□□ -1.65
VPS41YDR080W SAS4Q04003 481 aa4.74□□□□□ -1.65
VPS41YDR080W TY1B-BRQ12193 1756 aa4.73□□□□□ -1.65
VPS41YDR080W TY1B-GR3Q12316 1755 aa4.73□□□□□ -1.65
VPS41YDR080W TY1B-ORQ92393 1755 aa4.73□□□□□ -1.65
VPS41YDR080W DPS1P04802 557 aaKnown RBP4.73□□□□□ -1.65
VPS41YDR080W RPO31P04051 1460 aa4.73□□□□□ -1.65
VPS41YDR080W DNF1P32660 1571 aa4.73□□□□□ -1.65
VPS41YDR080W TAF2P23255 1407 aa4.72□□□□□ -1.65
VPS41YDR080W SSN2P38931 1420 aa4.72□□□□□ -1.65
VPS41YDR080W CHD1P32657 1468 aa4.72□□□□□ -1.65
VPS41YDR080W TUB4P53378 473 aa4.72□□□□□ -1.65
VPS41YDR080W CST6P40535 587 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-LR1P0C2J3 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-FP0CX63 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-GR2P0CX64 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-CP25384 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-DR2Q03494 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY1B-DR1Q03855 1755 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-DR3Q07791 1770 aaKnown RBP4.72□□□□□ -1.65
VPS41YDR080W TY2B-OR1Q12113 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-DR1Q12472 1770 aa4.72□□□□□ -1.65
VPS41YDR080W TY2B-OR2Q12501 1770 aa4.72□□□□□ -1.65
VPS41YDR080W MOD5P07884 428 aa4.71□□□□□ -1.65
VPS41YDR080W RRN7P40992 514 aa4.71□□□□□ -1.66
VPS41YDR080W RTF1P53064 558 aa4.71□□□□□ -1.66
VPS41YDR080W YNL115CP53925 644 aa4.71□□□□□ -1.66
VPS41YDR080W NPL4P33755 580 aa4.71□□□□□ -1.66
VPS41YDR080W GEA2P39993 1459 aaKnown RBP4.7□□□□□ -1.66
VPS41YDR080W HST2P53686 357 aa4.7□□□□□ -1.66
VPS41YDR080W TYW1Q08960 810 aaKnown RBP4.7□□□□□ -1.66
VPS41YDR080W IRC20Q06554 1556 aa4.7□□□□□ -1.66
VPS41YDR080W AMS1P22855 1083 aa4.69□□□□□ -1.66
VPS41YDR080W ATF2P53296 535 aa4.69□□□□□ -1.66
VPS41YDR080W PAN1P32521 1480 aa4.69□□□□□ -1.66
VPS41YDR080W CLA4P48562 842 aa4.68□□□□□ -1.66
VPS41YDR080W RSC30P38781 883 aa4.68□□□□□ -1.66
VPS41YDR080W LAM6Q08001 693 aa4.68□□□□□ -1.66
VPS41YDR080W KIN1P13185 1064 aa4.67□□□□□ -1.66
VPS41YDR080W YJU3P28321 313 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms