RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D SWE1P32944 819 aa4.06□□□□□ -1.76
YDR034C-DYDR034C-D STM1P39015 273 aaKnown RBP4.06□□□□□ -1.76
YDR034C-DYDR034C-D ESS1P22696 170 aa4.05□□□□□ -1.76
YDR034C-DYDR034C-D NSR1P27476 414 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
YDR034C-DYDR034C-D RAD54P32863 898 aa4.05□□□□□ -1.76
YDR034C-DYDR034C-D CST6P40535 587 aa4.05□□□□□ -1.76
YDR034C-DYDR034C-D CWC15Q03772 175 aaKnown RBP4.05□□□□□ -1.76
YDR034C-DYDR034C-D HAA1Q12753 694 aaKnown RBP4.05□□□□□ -1.76
YDR034C-DYDR034C-D SIS2P36024 562 aa4.04□□□□□ -1.76
YDR034C-DYDR034C-D UBP10P53874 792 aaPredicted RBP4.04□□□□□ -1.76
YDR034C-DYDR034C-D MAK16P10962 306 aaPredicted RBP4.03□□□□□ -1.76
YDR034C-DYDR034C-D SAM3Q08986 587 aa4.03□□□□□ -1.76
YDR034C-DYDR034C-D YAF9P53930 226 aa4.03□□□□□ -1.76
YDR034C-DYDR034C-D ASF1P32447 279 aa4.03□□□□□ -1.76
YDR034C-DYDR034C-D ITT1Q04638 464 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D FPR4Q06205 392 aaPredicted RBP4.02□□□□□ -1.77
YDR034C-DYDR034C-D PKH3Q03306 898 aaPredicted RBP4.02□□□□□ -1.77
YDR034C-DYDR034C-D YHL050CP38721 697 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D YHR219WP38900 624 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D YEL077CQ3E7X8 1277 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D PPX1P38698 397 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D GRE2Q12068 342 aaKnown RBP4.02□□□□□ -1.77
YDR034C-DYDR034C-D MMP1Q12372 583 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D SEC20P28791 383 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D YJR107WP47145 328 aa4.02□□□□□ -1.77
YDR034C-DYDR034C-D CLB5P30283 435 aa4.01□□□□□ -1.77
YDR034C-DYDR034C-D SPT5P27692 1063 aaKnown RBP4.01□□□□□ -1.77
YDR034C-DYDR034C-D NMD2P38798 1089 aaKnown RBP4.01□□□□□ -1.77
YDR034C-DYDR034C-D IOC3P43596 787 aa4.01□□□□□ -1.77
YDR034C-DYDR034C-D SVF1Q05515 481 aa4.01□□□□□ -1.77
YDR034C-DYDR034C-D BOL3P39724 118 aa4□□□□□ -1.77
YDR034C-DYDR034C-D SEC8P32855 1065 aa4□□□□□ -1.77
YDR034C-DYDR034C-D POL32P47110 350 aa4□□□□□ -1.77
YDR034C-DYDR034C-D ATH1P48016 1211 aa4□□□□□ -1.77
YDR034C-DYDR034C-D FRT1Q99332 602 aa4□□□□□ -1.77
YDR034C-DYDR034C-D MET4P32389 672 aa4□□□□□ -1.77
YDR034C-DYDR034C-D KIC1P38692 1080 aa4□□□□□ -1.77
YDR034C-DYDR034C-D NUG1P40010 520 aaKnown RBP4□□□□□ -1.77
YDR034C-DYDR034C-D ECM23Q02710 187 aa3.99□□□□□ -1.77
YDR034C-DYDR034C-D URN1Q06525 465 aaKnown RBP3.99□□□□□ -1.77
YDR034C-DYDR034C-D GAL2P13181 574 aa3.99□□□□□ -1.77
YDR034C-DYDR034C-D SLX5P32828 619 aaKnown RBP3.99□□□□□ -1.77
YDR034C-DYDR034C-D NNF1P47149 201 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D PIB1Q06651 286 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D RNH70P53331 553 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D CIT2P08679 460 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D TAT2P38967 592 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D BUD6P41697 788 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D UBX5Q06682 500 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D YOL098CQ12496 1037 aa3.98□□□□□ -1.77
YDR034C-DYDR034C-D APL6P46682 809 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D FYV10P40492 516 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D ALD3P54114 506 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D YPR109WQ06104 294 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D MCM16Q12262 181 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D ARG8P18544 423 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D NAF1P53919 492 aaKnown RBP3.97□□□□□ -1.77
YDR034C-DYDR034C-D OYE2Q03558 400 aaKnown RBP3.97□□□□□ -1.77
YDR034C-DYDR034C-D MNL2Q12205 849 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D YJR008WP47085 338 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D TPO2P53283 614 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D PUF6Q04373 656 aaKnown RBP3.97□□□□□ -1.77
YDR034C-DYDR034C-D NUT2Q06213 157 aa3.97□□□□□ -1.77
YDR034C-DYDR034C-D AI4P03878 556 aa3.96□□□□□ -1.78
YDR034C-DYDR034C-D MPH3P0CE00 602 aa3.96□□□□□ -1.78
YDR034C-DYDR034C-D SLI15P38283 698 aa3.96□□□□□ -1.78
YDR034C-DYDR034C-D JSN1P47135 1091 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
YDR034C-DYDR034C-D ATG1P53104 897 aa3.96□□□□□ -1.78
YDR034C-DYDR034C-D ROM1P53046 1155 aa3.96□□□□□ -1.78
YDR034C-DYDR034C-D GPI13Q07830 1017 aa3.96□□□□□ -1.78
YDR034C-DYDR034C-D MET1P36150 593 aa3.95□□□□□ -1.78
YDR034C-DYDR034C-D UBX7P38349 436 aa3.95□□□□□ -1.78
YDR034C-DYDR034C-D CSC1Q06538 782 aa3.95□□□□□ -1.78
YDR034C-DYDR034C-D YMR196WQ04336 1088 aa3.95□□□□□ -1.78
YDR034C-DYDR034C-D YPR084WQ06821 456 aa3.95□□□□□ -1.78
YDR034C-DYDR034C-D KAR5Q04746 504 aa3.94□□□□□ -1.78
YDR034C-DYDR034C-D GRS1P38088 690 aaKnown RBP3.94□□□□□ -1.78
YDR034C-DYDR034C-D SSF2Q12153 453 aaPredicted RBP3.94□□□□□ -1.78
YDR034C-DYDR034C-D ALG12P53730 551 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D RPN4Q03465 531 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D KTR7P40504 517 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D ACS2P52910 683 aaKnown RBP3.93□□□□□ -1.78
YDR034C-DYDR034C-D VPS16Q03308 798 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D CDC73Q06697 393 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D KTR2P33550 425 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D RTS3P53289 263 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D PNP1Q05788 311 aa3.93□□□□□ -1.78
YDR034C-DYDR034C-D ISF1P32488 338 aa3.92□□□□□ -1.78
YDR034C-DYDR034C-D SUV3P32580 737 aa3.92□□□□□ -1.78
YDR034C-DYDR034C-D TRM1P15565 570 aaKnown RBP3.92□□□□□ -1.78
YDR034C-DYDR034C-D ENP1P38333 483 aaKnown RBP3.92□□□□□ -1.78
YDR034C-DYDR034C-D YAP5P40574 245 aa3.92□□□□□ -1.78
YDR034C-DYDR034C-D JIP5Q06214 492 aaPredicted RBP3.92□□□□□ -1.78
YDR034C-DYDR034C-D GYP5Q12344 894 aa3.92□□□□□ -1.78
YDR034C-DYDR034C-D VAC8P39968 578 aa3.92□□□□□ -1.78
YDR034C-DYDR034C-D ACF4P47129 309 aa3.92□□□□□ -1.78
YDR034C-DYDR034C-D BOI1P38041 980 aaKnown RBP3.91□□□□□ -1.78
YDR034C-DYDR034C-D PPM2Q08282 695 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D PIN2Q12057 282 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D BUB1P41695 1021 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms