RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W RTG3P38165 486 aa9.26□□□□□ -0.93
CDC7YDL017W KRE5P22023 1365 aa9.26□□□□□ -0.93
CDC7YDL017W MRX12P47084 519 aa9.25□□□□□ -0.93
CDC7YDL017W CFT1Q06632 1357 aaKnown RBP9.23□□□□□ -0.93
CDC7YDL017W MAK10Q02197 733 aa9.23□□□□□ -0.93
CDC7YDL017W YML133CQ03099 1374 aa9.22□□□□□ -0.93
CDC7YDL017W YLL067CQ07888 1374 aa9.22□□□□□ -0.93
CDC7YDL017W YLL066CQ99208 1374 aa9.22□□□□□ -0.93
CDC7YDL017W RIA1P53893 1110 aa9.21□□□□□ -0.93
CDC7YDL017W MLP1Q02455 1875 aaKnown RBP9.18□□□□□ -0.94
CDC7YDL017W YEF3P16521 1044 aaKnown RBP9.18□□□□□ -0.94
CDC7YDL017W RCM1P53972 490 aa9.18□□□□□ -0.94
CDC7YDL017W IOC4Q04213 475 aa9.18□□□□□ -0.94
CDC7YDL017W PSK1P31374 1356 aa9.18□□□□□ -0.94
CDC7YDL017W PPH3P32345 308 aa9.16□□□□□ -0.94
CDC7YDL017W TRK1P12685 1235 aa9.15□□□□□ -0.94
CDC7YDL017W RPP0P05317 312 aaKnown RBP9.15□□□□□ -0.95
CDC7YDL017W YNR029CP53729 429 aaKnown RBP9.14□□□□□ -0.95
CDC7YDL017W CPS1P27614 576 aa9.12□□□□□ -0.95
CDC7YDL017W VPS27P40343 622 aaKnown RBP9.1□□□□□ -0.95
CDC7YDL017W CDC45Q08032 650 aa9.1□□□□□ -0.95
CDC7YDL017W LEU2P04173 364 aaPredicted RBP9.09□□□□□ -0.95
CDC7YDL017W YDL144CQ07589 356 aa9.09□□□□□ -0.95
CDC7YDL017W TAP42Q04372 366 aa9.08□□□□□ -0.96
CDC7YDL017W TY1B-NL2Q99337 1749 aaKnown RBP9.08□□□□□ -0.96
CDC7YDL017W MTR4P47047 1073 aaKnown RBP9.06□□□□□ -0.96
CDC7YDL017W RRP46P53256 223 aaPredicted RBP9.06□□□□□ -0.96
CDC7YDL017W PDI1P17967 522 aaKnown RBP9.05□□□□□ -0.96
CDC7YDL017W RVB2Q12464 471 aaKnown RBP9.05□□□□□ -0.96
CDC7YDL017W AUS1Q08409 1394 aa9.05□□□□□ -0.96
CDC7YDL017W KAR2P16474 682 aaKnown RBP9.05□□□□□ -0.96
CDC7YDL017W MPP10P47083 593 aaKnown RBP9.04□□□□□ -0.96
CDC7YDL017W ISW2Q08773 1120 aa9.04□□□□□ -0.96
CDC7YDL017W ADE6P38972 1358 aaKnown RBP9.03□□□□□ -0.96
CDC7YDL017W SUI2P20459 304 aaKnown RBP9.03□□□□□ -0.96
CDC7YDL017W PRP43P53131 767 aaKnown RBP9.03□□□□□ -0.96
CDC7YDL017W HIM1Q06674 414 aa9.03□□□□□ -0.96
CDC7YDL017W SNF2P22082 1703 aa9.03□□□□□ -0.96
CDC7YDL017W GRX4P32642 244 aa9.02□□□□□ -0.97
CDC7YDL017W RTR1P40084 226 aaPredicted RBP9.02□□□□□ -0.97
CDC7YDL017W RTF1P53064 558 aa9.02□□□□□ -0.97
CDC7YDL017W YMR196WQ04336 1088 aa9.02□□□□□ -0.97
CDC7YDL017W USO1P25386 1790 aa9.01□□□□□ -0.97
CDC7YDL017W FUN12P39730 1002 aaKnown RBP9.01□□□□□ -0.97
CDC7YDL017W YRB30P53107 440 aaPredicted RBP9.01□□□□□ -0.97
CDC7YDL017W RPS24AP0CX31 135 aaKnown RBP8.99□□□□□ -0.97
CDC7YDL017W RPS24BP0CX32 135 aaKnown RBP8.99□□□□□ -0.97
CDC7YDL017W PRD1P25375 712 aa8.98□□□□□ -0.97
CDC7YDL017W CSE4P36012 229 aa8.98□□□□□ -0.97
CDC7YDL017W PAP2P53632 584 aaKnown RBP8.98□□□□□ -0.97
CDC7YDL017W SAP155P43612 1002 aa8.96□□□□□ -0.97
CDC7YDL017W THI22Q06490 572 aa8.96□□□□□ -0.97
CDC7YDL017W RPO41P13433 1351 aaKnown RBP8.95□□□□□ -0.98
CDC7YDL017W THI12P42883 340 aa8.95□□□□□ -0.98
CDC7YDL017W THI5P43534 340 aa8.95□□□□□ -0.98
CDC7YDL017W THI11P47183 340 aa8.95□□□□□ -0.98
CDC7YDL017W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
CDC7YDL017W THI13Q07748 340 aa8.95□□□□□ -0.98
CDC7YDL017W GAS4Q08271 471 aa8.95□□□□□ -0.98
CDC7YDL017W HEF3P53978 1044 aaKnown RBP8.94□□□□□ -0.98
CDC7YDL017W DPS1P04802 557 aaKnown RBP8.93□□□□□ -0.98
CDC7YDL017W TPD3P31383 635 aa8.93□□□□□ -0.98
CDC7YDL017W RTT109Q07794 436 aa8.9□□□□□ -0.99
CDC7YDL017W FPR3P38911 411 aaKnown RBP8.89□□□□□ -0.99
CDC7YDL017W YRF1-4O13559 1382 aa8.88□□□□□ -0.99
CDC7YDL017W SIR4P11978 1358 aa8.88□□□□□ -0.99
CDC7YDL017W AKL1P38080 1108 aaKnown RBP8.88□□□□□ -0.99
CDC7YDL017W RPG1P38249 964 aaKnown RBP8.88□□□□□ -0.99
CDC7YDL017W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
CDC7YDL017W RAD2P07276 1031 aa8.87□□□□□ -0.99
CDC7YDL017W TY4B-HP0C2J7 1802 aa8.87□□□□□ -0.99
CDC7YDL017W TY4B-JP47024 1803 aa8.87□□□□□ -0.99
CDC7YDL017W PRI1P10363 409 aa8.86□□□□□ -0.99
CDC7YDL017W YIL092WP40497 633 aa8.86□□□□□ -0.99
CDC7YDL017W YRF1-2P40105 1681 aa8.86□□□□□ -0.99
CDC7YDL017W APC1P53886 1748 aa8.86□□□□□ -0.99
CDC7YDL017W DSD1P53095 428 aa8.85□□□□□ -0.99
CDC7YDL017W PRP5P21372 849 aaPredicted RBP8.84□□□□□ -0.99
CDC7YDL017W BUD27P43573 796 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
CDC7YDL017W DAL5P15365 543 aa8.83□□□□□ -1
CDC7YDL017W RPC31P17890 251 aa8.83□□□□□ -1
CDC7YDL017W YNL050CP53952 270 aa8.83□□□□□ -1
CDC7YDL017W NTH2P35172 780 aa8.82□□□□□ -1
CDC7YDL017W MAK21Q12176 1025 aaKnown RBP8.82□□□□□ -1
CDC7YDL017W YIL177CP40434 1758 aa8.82□□□□□ -1
CDC7YDL017W YJL225CP40889 1758 aa8.82□□□□□ -1
CDC7YDL017W PTP3P40048 928 aa8.81□□□□□ -1
CDC7YDL017W RRP5Q05022 1729 aaKnown RBP8.81□□□□□ -1
CDC7YDL017W SLM3Q12093 417 aa8.81□□□□□ -1
CDC7YDL017W PRP45P28004 379 aaPredicted RBP8.8□□□□□ -1
CDC7YDL017W GYP7P48365 746 aa8.8□□□□□ -1
CDC7YDL017W POL32P47110 350 aa8.8□□□□□ -1
CDC7YDL017W MAM1P40065 302 aa8.79□□□□□ -1
CDC7YDL017W MSB3P48566 633 aaPredicted RBP8.79□□□□□ -1
CDC7YDL017W ZDS1P50111 915 aaKnown RBP8.79□□□□□ -1
CDC7YDL017W RRT14P40470 206 aa8.78□□□□□ -1
CDC7YDL017W HSP104P31539 908 aaKnown RBP8.77□□□□□ -1.01
CDC7YDL017W CTF4Q01454 927 aa8.77□□□□□ -1.01
CDC7YDL017W AOS1Q06624 347 aa8.76□□□□□ -1.01
CDC7YDL017W SRT1Q03175 343 aa8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms