RNA–Protein interactions for RNA: YCR052W

RSC6, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC6, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC6YCR052W LTE1P07866 1435 aa6.51□□□□□ -1.37
RSC6YCR052W PAF1P38351 445 aa6.5□□□□□ -1.37
RSC6YCR052W SSP1P38871 571 aa6.48□□□□□ -1.37
RSC6YCR052W YOR238WQ08634 303 aa6.47□□□□□ -1.37
RSC6YCR052W VMR1P38735 1592 aa6.47□□□□□ -1.37
RSC6YCR052W CFT1Q06632 1357 aaKnown RBP6.47□□□□□ -1.37
RSC6YCR052W SIS1P25294 352 aaKnown RBP6.47□□□□□ -1.37
RSC6YCR052W PDR11P40550 1411 aa6.47□□□□□ -1.37
RSC6YCR052W NST1P53935 1240 aa6.47□□□□□ -1.37
RSC6YCR052W PDS5Q04264 1277 aa6.47□□□□□ -1.37
RSC6YCR052W NUP192P47054 1683 aa6.46□□□□□ -1.38
RSC6YCR052W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
RSC6YCR052W BNR1P40450 1375 aa6.44□□□□□ -1.38
RSC6YCR052W RAV1P47104 1357 aa6.44□□□□□ -1.38
RSC6YCR052W NUP188P52593 1655 aaKnown RBP6.44□□□□□ -1.38
RSC6YCR052W MST1P07236 462 aa6.43□□□□□ -1.38
RSC6YCR052W TAF5P38129 798 aa6.43□□□□□ -1.38
RSC6YCR052W RTC1Q08281 1341 aa6.43□□□□□ -1.38
RSC6YCR052W YAP5P40574 245 aa6.42□□□□□ -1.38
RSC6YCR052W FUN12P39730 1002 aaKnown RBP6.41□□□□□ -1.38
RSC6YCR052W DRS2P39524 1355 aa6.41□□□□□ -1.38
RSC6YCR052W MRM1P25270 412 aa6.4□□□□□ -1.39
RSC6YCR052W KIP3P53086 805 aaKnown RBP6.4□□□□□ -1.39
RSC6YCR052W YBL029C-AQ3E756 94 aa6.4□□□□□ -1.39
RSC6YCR052W MET5P47169 1442 aa6.4□□□□□ -1.39
RSC6YCR052W IML1P47170 1584 aa6.4□□□□□ -1.39
RSC6YCR052W DNF2Q12675 1612 aa6.39□□□□□ -1.39
RSC6YCR052W ESL2P36168 1195 aa6.36□□□□□ -1.39
RSC6YCR052W SNF2P22082 1703 aa6.36□□□□□ -1.39
RSC6YCR052W MIF2P35201 549 aa6.35□□□□□ -1.39
RSC6YCR052W WSC3Q12215 556 aa6.34□□□□□ -1.39
RSC6YCR052W CST9Q06032 482 aa6.34□□□□□ -1.4
RSC6YCR052W PIB1Q06651 286 aa6.34□□□□□ -1.4
RSC6YCR052W RPC31P17890 251 aa6.33□□□□□ -1.4
RSC6YCR052W CDC45Q08032 650 aa6.33□□□□□ -1.4
RSC6YCR052W RVB2Q12464 471 aaKnown RBP6.33□□□□□ -1.4
RSC6YCR052W SPE2P21182 396 aa6.32□□□□□ -1.4
RSC6YCR052W GTT3P39996 337 aa6.32□□□□□ -1.4
RSC6YCR052W VPS27P40343 622 aaKnown RBP6.32□□□□□ -1.4
RSC6YCR052W MGA2P40578 1113 aa6.32□□□□□ -1.4
RSC6YCR052W RPP0P05317 312 aaKnown RBP6.31□□□□□ -1.4
RSC6YCR052W RTG3P38165 486 aa6.31□□□□□ -1.4
RSC6YCR052W VNX1P42839 908 aa6.31□□□□□ -1.4
RSC6YCR052W IME2P32581 645 aa6.3□□□□□ -1.4
RSC6YCR052W YPR148CQ06523 435 aa6.29□□□□□ -1.4
RSC6YCR052W OPY1P38271 328 aa6.28□□□□□ -1.4
RSC6YCR052W YAP3P38749 330 aa6.28□□□□□ -1.4
RSC6YCR052W SPP1Q03012 353 aa6.28□□□□□ -1.4
RSC6YCR052W YDL144CQ07589 356 aa6.28□□□□□ -1.4
RSC6YCR052W TRK1P12685 1235 aa6.28□□□□□ -1.4
RSC6YCR052W YFR016CP43597 1233 aaKnown RBP6.28□□□□□ -1.4
RSC6YCR052W TRM3Q07527 1436 aa6.27□□□□□ -1.41
RSC6YCR052W YEF3P16521 1044 aaKnown RBP6.27□□□□□ -1.41
RSC6YCR052W SUI2P20459 304 aaKnown RBP6.27□□□□□ -1.41
RSC6YCR052W BCK1Q01389 1478 aa6.26□□□□□ -1.41
RSC6YCR052W FPR3P38911 411 aaKnown RBP6.26□□□□□ -1.41
RSC6YCR052W FKH1P40466 484 aa6.26□□□□□ -1.41
RSC6YCR052W TAF8Q03750 510 aa6.26□□□□□ -1.41
RSC6YCR052W SCT1P32784 759 aa6.25□□□□□ -1.41
RSC6YCR052W TYS1P36421 394 aaKnown RBP6.25□□□□□ -1.41
RSC6YCR052W CHZ1P40019 153 aaPredicted RBP6.25□□□□□ -1.41
RSC6YCR052W RAD9P14737 1309 aa6.25□□□□□ -1.41
RSC6YCR052W DNF3Q12674 1656 aa6.24□□□□□ -1.41
RSC6YCR052W MPP10P47083 593 aaKnown RBP6.24□□□□□ -1.41
RSC6YCR052W USO1P25386 1790 aa6.24□□□□□ -1.41
RSC6YCR052W IOC4Q04213 475 aa6.23□□□□□ -1.41
RSC6YCR052W CLC1P17891 233 aa6.22□□□□□ -1.41
RSC6YCR052W ALD4P46367 519 aaKnown RBP6.22□□□□□ -1.41
RSC6YCR052W YML133CQ03099 1374 aa6.22□□□□□ -1.41
RSC6YCR052W YLL067CQ07888 1374 aa6.22□□□□□ -1.41
RSC6YCR052W YLL066CQ99208 1374 aa6.22□□□□□ -1.41
RSC6YCR052W VPS29P38759 282 aa6.22□□□□□ -1.41
RSC6YCR052W YFR006WP43590 535 aa6.22□□□□□ -1.41
RSC6YCR052W YMR1P47147 688 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
RSC6YCR052W YRB30P53107 440 aaPredicted RBP6.22□□□□□ -1.41
RSC6YCR052W TY1B-NL2Q99337 1749 aaKnown RBP6.21□□□□□ -1.42
RSC6YCR052W HAP1P0CE41 1502 aa6.21□□□□□ -1.42
RSC6YCR052W DBP1P24784 617 aaKnown RBP6.21□□□□□ -1.42
RSC6YCR052W BNI1P41832 1953 aa6.21□□□□□ -1.42
RSC6YCR052W TIF11P38912 153 aaKnown RBP6.2□□□□□ -1.42
RSC6YCR052W IPL1P38991 367 aa6.2□□□□□ -1.42
RSC6YCR052W RRP46P53256 223 aaPredicted RBP6.2□□□□□ -1.42
RSC6YCR052W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
RSC6YCR052W RCR1P38212 213 aa6.19□□□□□ -1.42
RSC6YCR052W EAF7P53911 425 aaKnown RBP6.19□□□□□ -1.42
RSC6YCR052W CAB1Q04430 367 aa6.19□□□□□ -1.42
RSC6YCR052W ABP1P15891 592 aaKnown RBP6.18□□□□□ -1.42
RSC6YCR052W YIR014WP40570 242 aa6.18□□□□□ -1.42
RSC6YCR052W SAP155P43612 1002 aa6.18□□□□□ -1.42
RSC6YCR052W RTR1P40084 226 aaPredicted RBP6.17□□□□□ -1.42
RSC6YCR052W CAB3P36076 571 aa6.16□□□□□ -1.42
RSC6YCR052W STS1P38637 319 aa6.15□□□□□ -1.42
RSC6YCR052W ULI1P43604 169 aa6.15□□□□□ -1.42
RSC6YCR052W KRE5P22023 1365 aa6.15□□□□□ -1.43
RSC6YCR052W RAD2P07276 1031 aa6.15□□□□□ -1.43
RSC6YCR052W DAL5P15365 543 aa6.15□□□□□ -1.43
RSC6YCR052W TPD3P31383 635 aa6.15□□□□□ -1.43
RSC6YCR052W SNF7P39929 240 aaKnown RBP6.15□□□□□ -1.43
RSC6YCR052W NAP1P25293 417 aaKnown RBP6.14□□□□□ -1.43
RSC6YCR052W EBP2P36049 427 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms