RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W SLX5P32828 619 aaKnown RBP11.52□□□□□ -0.57
VBA3YCL069W MRX12P47084 519 aa11.52□□□□□ -0.57
VBA3YCL069W TY1B-NL2Q99337 1749 aaKnown RBP11.51□□□□□ -0.57
VBA3YCL069W RAD9P14737 1309 aa11.51□□□□□ -0.57
VBA3YCL069W RIA1P53893 1110 aa11.51□□□□□ -0.57
VBA3YCL069W CAB1Q04430 367 aa11.51□□□□□ -0.57
VBA3YCL069W TAF5P38129 798 aa11.5□□□□□ -0.57
VBA3YCL069W ALD4P46367 519 aaKnown RBP11.5□□□□□ -0.57
VBA3YCL069W BCK1Q01389 1478 aa11.49□□□□□ -0.57
VBA3YCL069W TIF4632P39936 914 aaKnown RBP11.48□□□□□ -0.57
VBA3YCL069W THI12P42883 340 aa11.48□□□□□ -0.57
VBA3YCL069W THI5P43534 340 aa11.48□□□□□ -0.57
VBA3YCL069W THI11P47183 340 aa11.48□□□□□ -0.57
VBA3YCL069W YMR196WQ04336 1088 aa11.48□□□□□ -0.57
VBA3YCL069W THI13Q07748 340 aa11.48□□□□□ -0.57
VBA3YCL069W YIL055CP40523 627 aaKnown RBP11.47□□□□□ -0.57
VBA3YCL069W CFT1Q06632 1357 aaKnown RBP11.44□□□□□ -0.58
VBA3YCL069W ESL2P36168 1195 aa11.44□□□□□ -0.58
VBA3YCL069W PTP3P40048 928 aa11.44□□□□□ -0.58
VBA3YCL069W ORC1P54784 914 aaPredicted RBP11.41□□□□□ -0.58
VBA3YCL069W TGL3P40308 642 aa11.4□□□□□ -0.59
VBA3YCL069W YNR029CP53729 429 aaKnown RBP11.4□□□□□ -0.59
VBA3YCL069W TAF8Q03750 510 aa11.4□□□□□ -0.59
VBA3YCL069W KIP3P53086 805 aaKnown RBP11.36□□□□□ -0.59
VBA3YCL069W NAP1P25293 417 aaKnown RBP11.33□□□□□ -0.6
VBA3YCL069W EPS1P40557 701 aa11.33□□□□□ -0.6
VBA3YCL069W TY3B-IQ7LHG5 1498 aaKnown RBP11.31□□□□□ -0.6
VBA3YCL069W SPE2P21182 396 aa11.3□□□□□ -0.6
VBA3YCL069W BDF1P35817 686 aa11.28□□□□□ -0.6
VBA3YCL069W RCM1P53972 490 aa11.28□□□□□ -0.6
VBA3YCL069W BUD31P25337 157 aaPredicted RBP11.28□□□□□ -0.6
VBA3YCL069W RSM7P47150 247 aa11.28□□□□□ -0.6
VBA3YCL069W YAH1Q12184 172 aaKnown RBP11.27□□□□□ -0.61
VBA3YCL069W POL5P39985 1022 aaKnown RBP11.25□□□□□ -0.61
VBA3YCL069W YLR419WQ06698 1435 aaKnown RBP11.24□□□□□ -0.61
VBA3YCL069W PPH3P32345 308 aa11.24□□□□□ -0.61
VBA3YCL069W CPS1P27614 576 aa11.23□□□□□ -0.61
VBA3YCL069W CHZ1P40019 153 aaPredicted RBP11.22□□□□□ -0.61
VBA3YCL069W BBC1P47068 1157 aa11.2□□□□□ -0.62
VBA3YCL069W AI2P03876 854 aa11.16□□□□□ -0.62
VBA3YCL069W PSK1P31374 1356 aa11.14□□□□□ -0.63
VBA3YCL069W MLP1Q02455 1875 aaKnown RBP11.12□□□□□ -0.63
VBA3YCL069W SCT1P32784 759 aa11.11□□□□□ -0.63
VBA3YCL069W TY4B-HP0C2J7 1802 aa11.1□□□□□ -0.63
VBA3YCL069W TY4B-JP47024 1803 aa11.1□□□□□ -0.63
VBA3YCL069W APP1P53933 587 aa11.1□□□□□ -0.63
VBA3YCL069W YLR271WQ06152 274 aa11.08□□□□□ -0.64
VBA3YCL069W MHP1P43638 1398 aa11.07□□□□□ -0.64
VBA3YCL069W LEU2P04173 364 aaPredicted RBP11.07□□□□□ -0.64
VBA3YCL069W RTG3P38165 486 aa11.07□□□□□ -0.64
VBA3YCL069W YML133CQ03099 1374 aa11.07□□□□□ -0.64
VBA3YCL069W YLL067CQ07888 1374 aa11.07□□□□□ -0.64
VBA3YCL069W YLL066CQ99208 1374 aa11.07□□□□□ -0.64
VBA3YCL069W PRP45P28004 379 aaPredicted RBP11.06□□□□□ -0.64
VBA3YCL069W FKH1P40466 484 aa11.06□□□□□ -0.64
VBA3YCL069W PDS5Q04264 1277 aa11.06□□□□□ -0.64
VBA3YCL069W ENT1Q12518 454 aa11.05□□□□□ -0.64
VBA3YCL069W ADE6P38972 1358 aaKnown RBP11.05□□□□□ -0.64
VBA3YCL069W RRP5Q05022 1729 aaKnown RBP11.05□□□□□ -0.64
VBA3YCL069W UBP9P39967 754 aa11.04□□□□□ -0.64
VBA3YCL069W RPS24AP0CX31 135 aaKnown RBP11.03□□□□□ -0.64
VBA3YCL069W RPS24BP0CX32 135 aaKnown RBP11.03□□□□□ -0.64
VBA3YCL069W CSE4P36012 229 aa11.03□□□□□ -0.64
VBA3YCL069W MTR4P47047 1073 aaKnown RBP11.03□□□□□ -0.64
VBA3YCL069W PRP5P21372 849 aaPredicted RBP11.02□□□□□ -0.65
VBA3YCL069W PRP43P53131 767 aaKnown RBP11□□□□□ -0.65
VBA3YCL069W ENV9Q08651 330 aa11□□□□□ -0.65
VBA3YCL069W SSP1P38871 571 aa10.99□□□□□ -0.65
VBA3YCL069W MSB3P48566 633 aaPredicted RBP10.97□□□□□ -0.65
VBA3YCL069W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.96□□□□□ -0.65not detected
VBA3YCL069W NST1P53935 1240 aa10.95□□□□□ -0.66
VBA3YCL069W PSD2P53037 1138 aaKnown RBP10.94□□□□□ -0.66
VBA3YCL069W GAS4Q08271 471 aa10.94□□□□□ -0.66
VBA3YCL069W YIL177CP40434 1758 aa10.94□□□□□ -0.66
VBA3YCL069W YJL225CP40889 1758 aa10.94□□□□□ -0.66
VBA3YCL069W NSR1P27476 414 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
VBA3YCL069W PDI1P17967 522 aaKnown RBP10.92□□□□□ -0.66
VBA3YCL069W MST1P07236 462 aa10.91□□□□□ -0.66
VBA3YCL069W RTF1P53064 558 aa10.91□□□□□ -0.66
VBA3YCL069W YOR238WQ08634 303 aa10.91□□□□□ -0.66
VBA3YCL069W SLM3Q12093 417 aa10.91□□□□□ -0.66
VBA3YCL069W YRF1-2P40105 1681 aa10.91□□□□□ -0.66
VBA3YCL069W DPS1P04802 557 aaKnown RBP10.9□□□□□ -0.66
VBA3YCL069W LEU3P08638 886 aa10.9□□□□□ -0.66
VBA3YCL069W HIM1Q06674 414 aa10.9□□□□□ -0.66
VBA3YCL069W IMH1Q06704 911 aaKnown RBP10.9□□□□□ -0.66
VBA3YCL069W TCB1Q12466 1186 aa10.9□□□□□ -0.67
VBA3YCL069W TAP42Q04372 366 aa10.89□□□□□ -0.67
VBA3YCL069W SPT7P35177 1332 aa10.89□□□□□ -0.67
VBA3YCL069W YEF3P16521 1044 aaKnown RBP10.88□□□□□ -0.67
VBA3YCL069W AUS1Q08409 1394 aa10.88□□□□□ -0.67
VBA3YCL069W YAP5P40574 245 aa10.86□□□□□ -0.67
VBA3YCL069W URB1P34241 1764 aaKnown RBP10.86□□□□□ -0.67
VBA3YCL069W SEC3P33332 1336 aaKnown RBP10.85□□□□□ -0.67
VBA3YCL069W TRK1P12685 1235 aa10.85□□□□□ -0.67
VBA3YCL069W GRX4P32642 244 aa10.85□□□□□ -0.67
VBA3YCL069W IES2P40154 320 aa10.85□□□□□ -0.67
VBA3YCL069W YRF1-3P0CX14 1859 aa10.85□□□□□ -0.67
VBA3YCL069W YRF1-7P0CX15 1859 aa10.85□□□□□ -0.67
VBA3YCL069W YRF1-6P53819 1859 aa10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms