RNA–Protein interactions for RNA: YCL025C

AGP1, Transcript of Low-affinity amino acid permease with broad substrate range, yeastyeast

Gene AGP1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AGP1YCL025C YEF3P16521 1044 aaKnown RBP13.64□□□□□ -0.23
AGP1YCL025C SCT1P32784 759 aa13.64□□□□□ -0.23
AGP1YCL025C TRK1P12685 1235 aa13.63□□□□□ -0.23
AGP1YCL025C NAP1P25293 417 aaKnown RBP13.62□□□□□ -0.23
AGP1YCL025C RCM1P53972 490 aa13.62□□□□□ -0.23
AGP1YCL025C MAK10Q02197 733 aa13.62□□□□□ -0.23
AGP1YCL025C PPH3P32345 308 aa13.61□□□□□ -0.23
AGP1YCL025C ABP1P15891 592 aaKnown RBP13.58□□□□□ -0.24
AGP1YCL025C PSK1P31374 1356 aa13.55□□□□□ -0.24
AGP1YCL025C USO1P25386 1790 aa13.55□□□□□ -0.24
AGP1YCL025C FUN12P39730 1002 aaKnown RBP13.53□□□□□ -0.24
AGP1YCL025C SNF2P22082 1703 aa13.51□□□□□ -0.25
AGP1YCL025C YNR029CP53729 429 aaKnown RBP13.51□□□□□ -0.25
AGP1YCL025C CPS1P27614 576 aa13.49□□□□□ -0.25
AGP1YCL025C YDL144CQ07589 356 aa13.49□□□□□ -0.25
AGP1YCL025C RRP46P53256 223 aaPredicted RBP13.48□□□□□ -0.25
AGP1YCL025C VPS27P40343 622 aaKnown RBP13.45□□□□□ -0.26
AGP1YCL025C RVB2Q12464 471 aaKnown RBP13.45□□□□□ -0.26
AGP1YCL025C RPP0P05317 312 aaKnown RBP13.45□□□□□ -0.26
AGP1YCL025C TY1B-NL2Q99337 1749 aaKnown RBP13.44□□□□□ -0.26
AGP1YCL025C CDC45Q08032 650 aa13.44□□□□□ -0.26
AGP1YCL025C AUS1Q08409 1394 aa13.44□□□□□ -0.26
AGP1YCL025C MPP10P47083 593 aaKnown RBP13.43□□□□□ -0.26
AGP1YCL025C HIM1Q06674 414 aa13.43□□□□□ -0.26
AGP1YCL025C IOC4Q04213 475 aa13.43□□□□□ -0.26
AGP1YCL025C LEU2P04173 364 aaPredicted RBP13.41□□□□□ -0.26
AGP1YCL025C SUI2P20459 304 aaKnown RBP13.41□□□□□ -0.26
AGP1YCL025C KAR2P16474 682 aaKnown RBP13.39□□□□□ -0.27
AGP1YCL025C TAP42Q04372 366 aa13.39□□□□□ -0.27
AGP1YCL025C PDI1P17967 522 aaKnown RBP13.37□□□□□ -0.27
AGP1YCL025C RTR1P40084 226 aaPredicted RBP13.37□□□□□ -0.27
AGP1YCL025C MTR4P47047 1073 aaKnown RBP13.37□□□□□ -0.27
AGP1YCL025C ADE6P38972 1358 aaKnown RBP13.35□□□□□ -0.27
AGP1YCL025C RPS24AP0CX31 135 aaKnown RBP13.34□□□□□ -0.27
AGP1YCL025C RPS24BP0CX32 135 aaKnown RBP13.34□□□□□ -0.27
AGP1YCL025C TY4B-HP0C2J7 1802 aa13.34□□□□□ -0.27
AGP1YCL025C TY4B-JP47024 1803 aa13.34□□□□□ -0.27
AGP1YCL025C PAP2P53632 584 aaKnown RBP13.31□□□□□ -0.28
AGP1YCL025C CSE4P36012 229 aa13.31□□□□□ -0.28
AGP1YCL025C THI22Q06490 572 aa13.31□□□□□ -0.28
AGP1YCL025C SAP155P43612 1002 aa13.3□□□□□ -0.28
AGP1YCL025C GAS4Q08271 471 aa13.3□□□□□ -0.28
AGP1YCL025C PRD1P25375 712 aa13.29□□□□□ -0.28
AGP1YCL025C YIL177CP40434 1758 aa13.29□□□□□ -0.28
AGP1YCL025C YJL225CP40889 1758 aa13.29□□□□□ -0.28
AGP1YCL025C RTF1P53064 558 aa13.29□□□□□ -0.28
AGP1YCL025C GRX4P32642 244 aa13.28□□□□□ -0.28
AGP1YCL025C PRP43P53131 767 aaKnown RBP13.28□□□□□ -0.28
AGP1YCL025C THI12P42883 340 aa13.27□□□□□ -0.29
AGP1YCL025C THI5P43534 340 aa13.27□□□□□ -0.29
AGP1YCL025C THI11P47183 340 aa13.27□□□□□ -0.29
AGP1YCL025C THI13Q07748 340 aa13.27□□□□□ -0.29
AGP1YCL025C TPD3P31383 635 aa13.26□□□□□ -0.29
AGP1YCL025C HEF3P53978 1044 aaKnown RBP13.25□□□□□ -0.29
AGP1YCL025C DPS1P04802 557 aaKnown RBP13.24□□□□□ -0.29
AGP1YCL025C RRP5Q05022 1729 aaKnown RBP13.24□□□□□ -0.29
AGP1YCL025C YRB30P53107 440 aaPredicted RBP13.23□□□□□ -0.29
AGP1YCL025C NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.23□□□□□ -0.29not detected
AGP1YCL025C RPO41P13433 1351 aaKnown RBP13.23□□□□□ -0.29
AGP1YCL025C YMR196WQ04336 1088 aa13.23□□□□□ -0.29
AGP1YCL025C RTT109Q07794 436 aa13.23□□□□□ -0.29
AGP1YCL025C BUB1P41695 1021 aaKnown RBP RIP-Chip data13.21□□□□□ -0.3not detected
AGP1YCL025C YRF1-2P40105 1681 aa13.2□□□□□ -0.3
AGP1YCL025C YRF1-4O13559 1382 aa13.17□□□□□ -0.3
AGP1YCL025C APC1P53886 1748 aa13.17□□□□□ -0.3
AGP1YCL025C YIL092WP40497 633 aa13.15□□□□□ -0.3
AGP1YCL025C DAL5P15365 543 aa13.15□□□□□ -0.3
AGP1YCL025C TFA1P36100 482 aa13.15□□□□□ -0.3
AGP1YCL025C AKL1P38080 1108 aaKnown RBP13.15□□□□□ -0.3
AGP1YCL025C URB1P34241 1764 aaKnown RBP13.13□□□□□ -0.31
AGP1YCL025C FPR3P38911 411 aaKnown RBP13.12□□□□□ -0.31
AGP1YCL025C RPC31P17890 251 aa13.11□□□□□ -0.31
AGP1YCL025C SIR4P11978 1358 aa13.11□□□□□ -0.31
AGP1YCL025C FKS3Q04952 1785 aa13.1□□□□□ -0.31
AGP1YCL025C RAD2P07276 1031 aa13.1□□□□□ -0.31
AGP1YCL025C DSD1P53095 428 aa13.1□□□□□ -0.31
AGP1YCL025C POL32P47110 350 aa13.06□□□□□ -0.32
AGP1YCL025C PRP5P21372 849 aaPredicted RBP13.05□□□□□ -0.32
AGP1YCL025C MSB3P48566 633 aaPredicted RBP13.05□□□□□ -0.32
AGP1YCL025C PRP45P28004 379 aaPredicted RBP13.04□□□□□ -0.32
AGP1YCL025C NTH2P35172 780 aa13.04□□□□□ -0.32
AGP1YCL025C RRT14P40470 206 aa13.03□□□□□ -0.32
AGP1YCL025C YNL050CP53952 270 aa13.03□□□□□ -0.32
AGP1YCL025C SLM3Q12093 417 aa13.02□□□□□ -0.32
AGP1YCL025C HSP104P31539 908 aaKnown RBP13.01□□□□□ -0.33
AGP1YCL025C BUD27P43573 796 aaKnown RBP RIP-Chip data13□□□□□ -0.33not detected
AGP1YCL025C MAK21Q12176 1025 aaKnown RBP13□□□□□ -0.33
AGP1YCL025C YBR287WP38355 427 aa13□□□□□ -0.33
AGP1YCL025C PTP3P40048 928 aa13□□□□□ -0.33
AGP1YCL025C GYP7P48365 746 aa13□□□□□ -0.33
AGP1YCL025C PUF6Q04373 656 aaKnown RBP12.99□□□□□ -0.33
AGP1YCL025C ZDS1P50111 915 aaKnown RBP12.98□□□□□ -0.33
AGP1YCL025C SRT1Q03175 343 aa12.98□□□□□ -0.33
AGP1YCL025C TRP5P00931 707 aaKnown RBP12.96□□□□□ -0.33
AGP1YCL025C ILV3P39522 585 aaKnown RBP12.96□□□□□ -0.33
AGP1YCL025C XKS1P42826 600 aa12.94□□□□□ -0.34
AGP1YCL025C MAM1P40065 302 aa12.94□□□□□ -0.34
AGP1YCL025C BMS1Q08965 1183 aaKnown RBP12.94□□□□□ -0.34
AGP1YCL025C COQ4O13525 335 aa12.93□□□□□ -0.34
AGP1YCL025C MIF2P35201 549 aa12.93□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms