RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W YEL077CQ3E7X8 1277 aa5.49□□□□□ -1.53
DPB3YBR278W TUM1Q08686 304 aaKnown RBP5.48□□□□□ -1.53
DPB3YBR278W PRT1P06103 763 aaKnown RBP5.47□□□□□ -1.53
DPB3YBR278W NPL4P33755 580 aa5.47□□□□□ -1.53
DPB3YBR278W TRK1P12685 1235 aa5.45□□□□□ -1.54
DPB3YBR278W GAP1P19145 602 aaPredicted RBP5.45□□□□□ -1.54
DPB3YBR278W CSN12P47130 423 aa5.45□□□□□ -1.54
DPB3YBR278W TEA1P47988 759 aa5.45□□□□□ -1.54
DPB3YBR278W BUD20Q08004 166 aaPredicted RBP5.45□□□□□ -1.54
DPB3YBR278W PKC1P24583 1151 aa5.44□□□□□ -1.54
DPB3YBR278W NUD1P32336 851 aa5.44□□□□□ -1.54
DPB3YBR278W ERG12P07277 443 aa5.43□□□□□ -1.54
DPB3YBR278W SDH2P21801 266 aa5.43□□□□□ -1.54
DPB3YBR278W CLB5P30283 435 aa5.43□□□□□ -1.54
DPB3YBR278W STR2P47164 639 aa5.43□□□□□ -1.54
DPB3YBR278W RGR1P19263 1082 aa5.42□□□□□ -1.54
DPB3YBR278W KTR1P27810 393 aaKnown RBP5.42□□□□□ -1.54
DPB3YBR278W ISM1P48526 1002 aa5.42□□□□□ -1.54
DPB3YBR278W GCD11P32481 527 aaKnown RBP5.4□□□□□ -1.54
DPB3YBR278W MVP1P40959 511 aaKnown RBP5.4□□□□□ -1.54
DPB3YBR278W SPT16P32558 1035 aaKnown RBP5.39□□□□□ -1.55
DPB3YBR278W GLN1P32288 370 aaKnown RBP5.38□□□□□ -1.55
DPB3YBR278W BIM1P40013 344 aa5.38□□□□□ -1.55
DPB3YBR278W NIS1P53939 407 aa5.38□□□□□ -1.55
DPB3YBR278W TYW1Q08960 810 aaKnown RBP5.38□□□□□ -1.55
DPB3YBR278W ATG32P40458 529 aa5.37□□□□□ -1.55
DPB3YBR278W YJL007CP47080 104 aa5.37□□□□□ -1.55
DPB3YBR278W HST2P53686 357 aa5.37□□□□□ -1.55
DPB3YBR278W YMR196WQ04336 1088 aa5.37□□□□□ -1.55
DPB3YBR278W PAT1P25644 796 aaKnown RBP5.36□□□□□ -1.55
DPB3YBR278W FPK1P53739 893 aa5.36□□□□□ -1.55
DPB3YBR278W YPR109WQ06104 294 aa5.36□□□□□ -1.55
DPB3YBR278W BIO2P32451 375 aa5.35□□□□□ -1.55
DPB3YBR278W YBL036CP38197 257 aa5.35□□□□□ -1.55
DPB3YBR278W SSA1P10591 642 aaKnown RBP5.34□□□□□ -1.55
DPB3YBR278W RPL34BP40525 121 aaKnown RBP5.34□□□□□ -1.55
DPB3YBR278W TY1A-DR4O74302 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-HP0C2I4 478 aaKnown RBP5.33□□□□□ -1.56
DPB3YBR278W TY1A-AP0CX57 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-PR1P0CX58 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-ORP0CX59 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-PR2P0CX60 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-DR5P0CX65 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-ER2P0CX66 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-GR3P0CX67 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-LR1P0CX68 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-MR2P0CX69 440 aa5.33□□□□□ -1.56
DPB3YBR278W RRN7P40992 514 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-JR2P47099 440 aa5.33□□□□□ -1.56
DPB3YBR278W PKH3Q03306 898 aaPredicted RBP5.33□□□□□ -1.56
DPB3YBR278W TY1A-DR1Q03856 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-ML1Q04706 440 aaKnown RBP5.33□□□□□ -1.56
DPB3YBR278W SUB2Q07478 446 aaKnown RBP5.33□□□□□ -1.56
DPB3YBR278W TY1A-BRQ12217 440 aa5.33□□□□□ -1.56
DPB3YBR278W RAD59Q12223 238 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-NL2Q12470 440 aa5.33□□□□□ -1.56
DPB3YBR278W TY1A-GR2Q12485 440 aa5.33□□□□□ -1.56
DPB3YBR278W TIF1P10081 395 aaKnown RBP5.32□□□□□ -1.56
DPB3YBR278W SEC2P17065 759 aa5.32□□□□□ -1.56
DPB3YBR278W ESS1P22696 170 aa5.32□□□□□ -1.56
DPB3YBR278W CST6P40535 587 aa5.32□□□□□ -1.56
DPB3YBR278W MMP1Q12372 583 aa5.32□□□□□ -1.56
DPB3YBR278W GEF1P37020 779 aa5.31□□□□□ -1.56
DPB3YBR278W RGA1P39083 1007 aa5.31□□□□□ -1.56
DPB3YBR278W GCR2Q01722 534 aa5.31□□□□□ -1.56
DPB3YBR278W FRK1Q03002 865 aaPredicted RBP5.31□□□□□ -1.56
DPB3YBR278W SIT4P20604 311 aa5.3□□□□□ -1.56
DPB3YBR278W SCJ1P25303 377 aa5.3□□□□□ -1.56
DPB3YBR278W SSA4P22202 642 aaKnown RBP5.29□□□□□ -1.56
DPB3YBR278W YJU3P28321 313 aa5.29□□□□□ -1.56
DPB3YBR278W AIR1P40507 360 aaKnown RBP5.29□□□□□ -1.56
DPB3YBR278W BRE2P43132 505 aa5.29□□□□□ -1.56
DPB3YBR278W LAM6Q08001 693 aa5.29□□□□□ -1.56
DPB3YBR278W KEX2P13134 814 aa5.28□□□□□ -1.56
DPB3YBR278W CSE4P36012 229 aa5.28□□□□□ -1.56
DPB3YBR278W YPR204WQ08995 1032 aa5.28□□□□□ -1.56
DPB3YBR278W ARG8P18544 423 aa5.27□□□□□ -1.57
DPB3YBR278W BDP1P46678 594 aa5.27□□□□□ -1.57
DPB3YBR278W CLA4P48562 842 aa5.27□□□□□ -1.57
DPB3YBR278W YML020WQ03722 664 aa5.27□□□□□ -1.57
DPB3YBR278W CPS1P27614 576 aa5.26□□□□□ -1.57
DPB3YBR278W RTG2P32608 588 aaKnown RBP5.26□□□□□ -1.57
DPB3YBR278W YNL108CP53929 270 aa5.26□□□□□ -1.57
DPB3YBR278W SPT5P27692 1063 aaKnown RBP5.25□□□□□ -1.57
DPB3YBR278W TTI1P36097 1038 aa5.25□□□□□ -1.57
DPB3YBR278W RTF1P53064 558 aa5.25□□□□□ -1.57
DPB3YBR278W NOP8Q08287 484 aaPredicted RBP5.25□□□□□ -1.57
DPB3YBR278W CDC4P07834 779 aa5.24□□□□□ -1.57
DPB3YBR278W MAK16P10962 306 aaPredicted RBP5.24□□□□□ -1.57
DPB3YBR278W SUP45P12385 437 aaKnown RBP5.24□□□□□ -1.57
DPB3YBR278W GBP2P25555 427 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57 RIP-Chip
DPB3YBR278W ERF2Q06551 359 aa5.24□□□□□ -1.57
DPB3YBR278W SLY41P22215 453 aa5.23□□□□□ -1.57
DPB3YBR278W RSC30P38781 883 aa5.23□□□□□ -1.57
DPB3YBR278W YNL115CP53925 644 aa5.23□□□□□ -1.57
DPB3YBR278W HED1Q03937 162 aa5.23□□□□□ -1.57
DPB3YBR278W RGA2Q06407 1009 aa5.23□□□□□ -1.57
DPB3YBR278W ENO2P00925 437 aaKnown RBP5.22□□□□□ -1.57
DPB3YBR278W GAR1P28007 205 aaKnown RBP5.22□□□□□ -1.57
DPB3YBR278W SLX8P40072 274 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms