RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C MLP1Q02455 1875 aaKnown RBP14.41□□□□□ -0.1
SWC5YBR231C CHZ1P40019 153 aaPredicted RBP14.4□□□□□ -0.1
SWC5YBR231C PPH3P32345 308 aa14.39□□□□□ -0.11
SWC5YBR231C PTP3P40048 928 aa14.35□□□□□ -0.11
SWC5YBR231C ADE6P38972 1358 aaKnown RBP14.34□□□□□ -0.11
SWC5YBR231C TY4B-HP0C2J7 1802 aa14.34□□□□□ -0.11
SWC5YBR231C TY4B-JP47024 1803 aa14.34□□□□□ -0.11
SWC5YBR231C YML133CQ03099 1374 aa14.32□□□□□ -0.12
SWC5YBR231C YLL067CQ07888 1374 aa14.32□□□□□ -0.12
SWC5YBR231C YLL066CQ99208 1374 aa14.32□□□□□ -0.12
SWC5YBR231C FKH1P40466 484 aa14.31□□□□□ -0.12
SWC5YBR231C PDS5Q04264 1277 aa14.3□□□□□ -0.12
SWC5YBR231C RRP5Q05022 1729 aaKnown RBP14.29□□□□□ -0.12
SWC5YBR231C SEC3P33332 1336 aaKnown RBP14.29□□□□□ -0.12
SWC5YBR231C LEU2P04173 364 aaPredicted RBP14.28□□□□□ -0.12
SWC5YBR231C MTR4P47047 1073 aaKnown RBP14.28□□□□□ -0.12
SWC5YBR231C PRP43P53131 767 aaKnown RBP14.24□□□□□ -0.13
SWC5YBR231C RTG3P38165 486 aa14.22□□□□□ -0.13
SWC5YBR231C YAH1Q12184 172 aaKnown RBP14.22□□□□□ -0.13
SWC5YBR231C YRF1-2P40105 1681 aa14.2□□□□□ -0.14
SWC5YBR231C PDI1P17967 522 aaKnown RBP14.16□□□□□ -0.14
SWC5YBR231C CSE4P36012 229 aa14.15□□□□□ -0.14
SWC5YBR231C PRP45P28004 379 aaPredicted RBP14.14□□□□□ -0.15
SWC5YBR231C TAP42Q04372 366 aa14.14□□□□□ -0.15
SWC5YBR231C PRP5P21372 849 aaPredicted RBP14.13□□□□□ -0.15
SWC5YBR231C RPS24AP0CX31 135 aaKnown RBP14.12□□□□□ -0.15
SWC5YBR231C RPS24BP0CX32 135 aaKnown RBP14.12□□□□□ -0.15
SWC5YBR231C REB1P21538 810 aa14.12□□□□□ -0.15
SWC5YBR231C RTF1P53064 558 aa14.12□□□□□ -0.15
SWC5YBR231C YIL177CP40434 1758 aa14.1□□□□□ -0.15
SWC5YBR231C YJL225CP40889 1758 aa14.1□□□□□ -0.15
SWC5YBR231C GRX4P32642 244 aa14.1□□□□□ -0.15
SWC5YBR231C SPT7P35177 1332 aa14.1□□□□□ -0.15
SWC5YBR231C PSD2P53037 1138 aaKnown RBP14.09□□□□□ -0.15
SWC5YBR231C ENT1Q12518 454 aa14.08□□□□□ -0.16
SWC5YBR231C APP1P53933 587 aa14.07□□□□□ -0.16
SWC5YBR231C FKS3Q04952 1785 aa14.06□□□□□ -0.16
SWC5YBR231C AUS1Q08409 1394 aa14.06□□□□□ -0.16
SWC5YBR231C MSB3P48566 633 aaPredicted RBP14.04□□□□□ -0.16
SWC5YBR231C URB1P34241 1764 aaKnown RBP14.04□□□□□ -0.16
SWC5YBR231C NST1P53935 1240 aa14.03□□□□□ -0.16
SWC5YBR231C ENV9Q08651 330 aa14.03□□□□□ -0.16
SWC5YBR231C SLM3Q12093 417 aa14.03□□□□□ -0.16
SWC5YBR231C YEF3P16521 1044 aaKnown RBP14.02□□□□□ -0.17
SWC5YBR231C APC1P53886 1748 aa14.01□□□□□ -0.17
SWC5YBR231C RSF2P46974 1380 aa14□□□□□ -0.17
SWC5YBR231C DPS1P04802 557 aaKnown RBP14□□□□□ -0.17
SWC5YBR231C KAR2P16474 682 aaKnown RBP14□□□□□ -0.17
SWC5YBR231C TCB1Q12466 1186 aa14□□□□□ -0.17
SWC5YBR231C IOC4Q04213 475 aa13.99□□□□□ -0.17
SWC5YBR231C GAS4Q08271 471 aa13.98□□□□□ -0.17
SWC5YBR231C HIM1Q06674 414 aa13.97□□□□□ -0.17
SWC5YBR231C IMH1Q06704 911 aaKnown RBP13.97□□□□□ -0.17
SWC5YBR231C RPO41P13433 1351 aaKnown RBP13.96□□□□□ -0.17
SWC5YBR231C TRK1P12685 1235 aa13.96□□□□□ -0.17
SWC5YBR231C YIL055CP40523 627 aaKnown RBP13.95□□□□□ -0.18
SWC5YBR231C SNF2P22082 1703 aa13.95□□□□□ -0.18
SWC5YBR231C LEU3P08638 886 aa13.93□□□□□ -0.18
SWC5YBR231C ENP1P38333 483 aaKnown RBP13.92□□□□□ -0.18
SWC5YBR231C YRF1-3P0CX14 1859 aa13.92□□□□□ -0.18
SWC5YBR231C YRF1-7P0CX15 1859 aa13.92□□□□□ -0.18
SWC5YBR231C YRF1-6P53819 1859 aa13.92□□□□□ -0.18
SWC5YBR231C SIR4P11978 1358 aa13.9□□□□□ -0.18
SWC5YBR231C IES2P40154 320 aa13.89□□□□□ -0.19
SWC5YBR231C XKS1P42826 600 aa13.89□□□□□ -0.19
SWC5YBR231C ROM2P51862 1356 aaKnown RBP13.88□□□□□ -0.19
SWC5YBR231C PAP2P53632 584 aaKnown RBP13.86□□□□□ -0.19
SWC5YBR231C RRP46P53256 223 aaPredicted RBP13.81□□□□□ -0.2
SWC5YBR231C RCR1P38212 213 aa13.8□□□□□ -0.2
SWC5YBR231C YRF1-4O13559 1382 aa13.8□□□□□ -0.2
SWC5YBR231C BUB1P41695 1021 aaKnown RBP RIP-Chip data13.79□□□□□ -0.2not detected
SWC5YBR231C MEC3Q02574 474 aa13.79□□□□□ -0.2
SWC5YBR231C EDE1P34216 1381 aa13.79□□□□□ -0.2
SWC5YBR231C AKL1P38080 1108 aaKnown RBP13.78□□□□□ -0.2
SWC5YBR231C DSD1P53095 428 aa13.78□□□□□ -0.2
SWC5YBR231C CTF4Q01454 927 aa13.78□□□□□ -0.2
SWC5YBR231C YMR074CQ04773 145 aa13.78□□□□□ -0.2
SWC5YBR231C GLN1P32288 370 aaKnown RBP13.77□□□□□ -0.21
SWC5YBR231C YKL133CP36066 463 aa13.77□□□□□ -0.21
SWC5YBR231C RPP0P05317 312 aaKnown RBP13.76□□□□□ -0.21
SWC5YBR231C RTR1P40084 226 aaPredicted RBP13.76□□□□□ -0.21
SWC5YBR231C DOT5P40553 215 aa13.74□□□□□ -0.21
SWC5YBR231C PRD1P25375 712 aa13.72□□□□□ -0.21
SWC5YBR231C HSP104P31539 908 aaKnown RBP13.72□□□□□ -0.21
SWC5YBR231C FOX2Q02207 900 aaKnown RBP13.72□□□□□ -0.21
SWC5YBR231C YDL144CQ07589 356 aa13.72□□□□□ -0.21
SWC5YBR231C ADE16P54113 591 aaKnown RBP13.7□□□□□ -0.22
SWC5YBR231C INP54Q08227 384 aaKnown RBP13.7□□□□□ -0.22
SWC5YBR231C AOS1Q06624 347 aa13.69□□□□□ -0.22
SWC5YBR231C MPP10P47083 593 aaKnown RBP13.68□□□□□ -0.22
SWC5YBR231C NTH2P35172 780 aa13.67□□□□□ -0.22
SWC5YBR231C FRK1Q03002 865 aaPredicted RBP13.67□□□□□ -0.22
SWC5YBR231C RIM15P43565 1770 aa13.66□□□□□ -0.22
SWC5YBR231C VPS27P40343 622 aaKnown RBP13.66□□□□□ -0.22
SWC5YBR231C YNL050CP53952 270 aa13.66□□□□□ -0.22
SWC5YBR231C NUP145P49687 1317 aa13.65□□□□□ -0.22
SWC5YBR231C COBP00163 385 aa13.65□□□□□ -0.22
SWC5YBR231C NSR1P27476 414 aaKnown RBP RIP-Chip data13.65□□□□□ -0.22 RIP-Chip
SWC5YBR231C LAM6Q08001 693 aa13.65□□□□□ -0.22
SWC5YBR231C THI22Q06490 572 aa13.64□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms