RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
PCDHA11-202ENST00000616325 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
PCDHA11-202ENST00000616325 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
PCDHA11-202ENST00000616325 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
PCDHA11-202ENST00000616325 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
PCDHA11-202ENST00000616325 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
PCDHA11-202ENST00000616325 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
PCDHA11-202ENST00000616325 SLC4A3P48751 1232 aa17.92■□□□□ 0.46
PCDHA11-202ENST00000616325 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
PCDHA11-202ENST00000616325 SNAPC4Q5SXM2 1469 aa17.89■□□□□ 0.46
PCDHA11-202ENST00000616325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
PCDHA11-202ENST00000616325 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
PCDHA11-202ENST00000616325 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
PCDHA11-202ENST00000616325 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
PCDHA11-202ENST00000616325 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
PCDHA11-202ENST00000616325 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
PCDHA11-202ENST00000616325 SKAP1Q86WV1 359 aa17.87■□□□□ 0.45
PCDHA11-202ENST00000616325 PKD2Q13563 968 aa17.87■□□□□ 0.45
PCDHA11-202ENST00000616325 CFDP1Q9UEE9 299 aaPredicted RBP17.86■□□□□ 0.45
PCDHA11-202ENST00000616325 RGL3Q3MIN7 710 aa17.85■□□□□ 0.45
PCDHA11-202ENST00000616325 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
PCDHA11-202ENST00000616325 KDM6BO15054 1643 aa17.85■□□□□ 0.45
PCDHA11-202ENST00000616325 PDE4AP27815 886 aa17.85■□□□□ 0.45
PCDHA11-202ENST00000616325 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PCDHA11-202ENST00000616325 EXOC6Q8TAG9 804 aa17.83■□□□□ 0.45
PCDHA11-202ENST00000616325 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
PCDHA11-202ENST00000616325 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
PCDHA11-202ENST00000616325 UBE2Q2Q8WVN8 375 aa17.82■□□□□ 0.44
PCDHA11-202ENST00000616325 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
PCDHA11-202ENST00000616325 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
PCDHA11-202ENST00000616325 ARXQ96QS3 562 aa17.8■□□□□ 0.44
PCDHA11-202ENST00000616325 DCAF11Q8TEB1 546 aa17.8■□□□□ 0.44
PCDHA11-202ENST00000616325 SUPT6HQ7KZ85 1726 aaKnown RBP17.79■□□□□ 0.44
PCDHA11-202ENST00000616325 GSE1Q14687 1217 aa17.79■□□□□ 0.44
PCDHA11-202ENST00000616325 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 USP47Q96K76 1375 aa17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
PCDHA11-202ENST00000616325 KDM5BQ9UGL1 1544 aa17.77■□□□□ 0.44
PCDHA11-202ENST00000616325 PLIN1O60240 522 aa17.76■□□□□ 0.43
PCDHA11-202ENST00000616325 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
PCDHA11-202ENST00000616325 FRAT1Q92837 279 aaPredicted RBP17.76■□□□□ 0.43
PCDHA11-202ENST00000616325 EHBP1L1Q8N3D4 1523 aa17.76■□□□□ 0.43
PCDHA11-202ENST00000616325 ANKRD30BQ9BXX2 1392 aa17.75■□□□□ 0.43
PCDHA11-202ENST00000616325 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
PCDHA11-202ENST00000616325 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
PCDHA11-202ENST00000616325 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
PCDHA11-202ENST00000616325 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
PCDHA11-202ENST00000616325 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
PCDHA11-202ENST00000616325 UGGT2Q9NYU1 1516 aa17.71■□□□□ 0.43
PCDHA11-202ENST00000616325 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
PCDHA11-202ENST00000616325 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
PCDHA11-202ENST00000616325 CUL7Q14999 1698 aa17.7■□□□□ 0.42
PCDHA11-202ENST00000616325 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
PCDHA11-202ENST00000616325 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
PCDHA11-202ENST00000616325 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
PCDHA11-202ENST00000616325 NUP155O75694 1391 aa17.68■□□□□ 0.42
PCDHA11-202ENST00000616325 DAPK1P53355 1430 aa17.68■□□□□ 0.42
PCDHA11-202ENST00000616325 PNISRQ8TF01 805 aaKnown RBP17.68■□□□□ 0.42
PCDHA11-202ENST00000616325 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
PCDHA11-202ENST00000616325 ABCC5O15440 1437 aa17.66■□□□□ 0.42
PCDHA11-202ENST00000616325 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
PCDHA11-202ENST00000616325 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
PCDHA11-202ENST00000616325 RPRD2Q5VT52 1461 aaKnown RBP17.65■□□□□ 0.42
PCDHA11-202ENST00000616325 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
PCDHA11-202ENST00000616325 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
PCDHA11-202ENST00000616325 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
PCDHA11-202ENST00000616325 WASHC2CQ9Y4E1 1318 aa17.64■□□□□ 0.41
PCDHA11-202ENST00000616325 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
PCDHA11-202ENST00000616325 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
PCDHA11-202ENST00000616325 DDRGK1Q96HY6 314 aa17.63■□□□□ 0.41
PCDHA11-202ENST00000616325 FRAT2O75474 233 aaPredicted RBP17.62■□□□□ 0.41
PCDHA11-202ENST00000616325 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
PCDHA11-202ENST00000616325 RGS3P49796 1198 aa17.6■□□□□ 0.41
PCDHA11-202ENST00000616325 NBPF1Q3BBV0 1214 aa17.59■□□□□ 0.41
PCDHA11-202ENST00000616325 SAMD9Q5K651 1589 aa17.59■□□□□ 0.41
PCDHA11-202ENST00000616325 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
PCDHA11-202ENST00000616325 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.41
PCDHA11-202ENST00000616325 ROCK2O75116 1388 aaKnown RBP17.58■□□□□ 0.41
PCDHA11-202ENST00000616325 MIA2Q96PC5 1412 aa17.58■□□□□ 0.4
PCDHA11-202ENST00000616325 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.4
PCDHA11-202ENST00000616325 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
PCDHA11-202ENST00000616325 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
PCDHA11-202ENST00000616325 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
PCDHA11-202ENST00000616325 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
PCDHA11-202ENST00000616325 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
PCDHA11-202ENST00000616325 PKNOX2Q96KN3 472 aa17.54■□□□□ 0.4
PCDHA11-202ENST00000616325 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
PCDHA11-202ENST00000616325 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
PCDHA11-202ENST00000616325 RSPH6AQ9H0K4 717 aa17.53■□□□□ 0.4
PCDHA11-202ENST00000616325 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
PCDHA11-202ENST00000616325 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
PCDHA11-202ENST00000616325 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
PCDHA11-202ENST00000616325 ANKRD50Q9ULJ7 1429 aa17.52■□□□□ 0.39
PCDHA11-202ENST00000616325 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
PCDHA11-202ENST00000616325 MS4A1P11836 297 aa17.52■□□□□ 0.39
PCDHA11-202ENST00000616325 NAP1L5Q96NT1 182 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms