RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
TRPV1-206ENST00000571088 BECN1Q14457 450 aa17.78■□□□□ 0.44
TRPV1-206ENST00000571088 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
TRPV1-206ENST00000571088 MSH5O43196 834 aa17.77■□□□□ 0.44
TRPV1-206ENST00000571088 WDR43Q15061 677 aaKnown RBP eCLIP17.77■□□□□ 0.43
TRPV1-206ENST00000571088 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.43
TRPV1-206ENST00000571088 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
TRPV1-206ENST00000571088 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
TRPV1-206ENST00000571088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.431e-6■■□□□ 14.1
TRPV1-206ENST00000571088 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
TRPV1-206ENST00000571088 PKD2Q13563 968 aa17.73■□□□□ 0.43
TRPV1-206ENST00000571088 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
TRPV1-206ENST00000571088 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■□□ 17.3
TRPV1-206ENST00000571088 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
TRPV1-206ENST00000571088 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
TRPV1-206ENST00000571088 TRIM44Q96DX7 344 aaPredicted RBP17.71■□□□□ 0.43
TRPV1-206ENST00000571088 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
TRPV1-206ENST00000571088 NUDCQ9Y266 331 aa17.71■□□□□ 0.43
TRPV1-206ENST00000571088 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
TRPV1-206ENST00000571088 CNTLNQ9NXG0 1405 aa17.69■□□□□ 0.42
TRPV1-206ENST00000571088 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
TRPV1-206ENST00000571088 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
TRPV1-206ENST00000571088 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
TRPV1-206ENST00000571088 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
TRPV1-206ENST00000571088 PAK3O75914 559 aaPredicted RBP17.68■□□□□ 0.42
TRPV1-206ENST00000571088 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
TRPV1-206ENST00000571088 DCAF11Q8TEB1 546 aa17.67■□□□□ 0.42
TRPV1-206ENST00000571088 NAIPQ13075 1403 aa17.67■□□□□ 0.42
TRPV1-206ENST00000571088 ANKRD30AQ9BXX3 1397 aa17.66■□□□□ 0.42
TRPV1-206ENST00000571088 EHBP1L1Q8N3D4 1523 aa17.66■□□□□ 0.42
TRPV1-206ENST00000571088 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
TRPV1-206ENST00000571088 IL27Q8NEV9 243 aa17.64■□□□□ 0.41
TRPV1-206ENST00000571088 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
TRPV1-206ENST00000571088 PDE4AP27815 886 aa17.62■□□□□ 0.41
TRPV1-206ENST00000571088 NUP155O75694 1391 aa17.62■□□□□ 0.41
TRPV1-206ENST00000571088 RALBP1Q15311 655 aa17.61■□□□□ 0.41
TRPV1-206ENST00000571088 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
TRPV1-206ENST00000571088 CUL7Q14999 1698 aa17.61■□□□□ 0.41
TRPV1-206ENST00000571088 KIF7Q2M1P5 1343 aa17.6■□□□□ 0.41
TRPV1-206ENST00000571088 SLC4A3P48751 1232 aa17.6■□□□□ 0.41
TRPV1-206ENST00000571088 GSE1Q14687 1217 aa17.6■□□□□ 0.41
TRPV1-206ENST00000571088 CARMIL2Q6F5E8 1435 aa17.59■□□□□ 0.41
TRPV1-206ENST00000571088 NESP48681 1621 aa17.59■□□□□ 0.41
TRPV1-206ENST00000571088 MIA2Q96PC5 1412 aa17.58■□□□□ 0.4
TRPV1-206ENST00000571088 USP47Q96K76 1375 aa17.58■□□□□ 0.4
TRPV1-206ENST00000571088 CC2D2AQ9P2K1 1620 aa17.57■□□□□ 0.4
TRPV1-206ENST00000571088 ARID4BQ4LE39 1312 aaPredicted RBP17.56■□□□□ 0.4
TRPV1-206ENST00000571088 CC2D1BQ5T0F9 858 aaKnown RBP17.56■□□□□ 0.4
TRPV1-206ENST00000571088 L1TD1Q5T7N2 865 aaKnown RBP17.56■□□□□ 0.4
TRPV1-206ENST00000571088 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
TRPV1-206ENST00000571088 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
TRPV1-206ENST00000571088 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
TRPV1-206ENST00000571088 KNSTRNQ9Y448 316 aa17.54■□□□□ 0.4
TRPV1-206ENST00000571088 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
TRPV1-206ENST00000571088 EXOC6Q8TAG9 804 aa17.54■□□□□ 0.4
TRPV1-206ENST00000571088 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
TRPV1-206ENST00000571088 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
TRPV1-206ENST00000571088 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
TRPV1-206ENST00000571088 CFAP43Q8NDM7 1665 aa17.53■□□□□ 0.4
TRPV1-206ENST00000571088 TMF1P82094 1093 aa17.52■□□□□ 0.4
TRPV1-206ENST00000571088 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
TRPV1-206ENST00000571088 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
TRPV1-206ENST00000571088 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
TRPV1-206ENST00000571088 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
TRPV1-206ENST00000571088 NBPF8Q3BBV2 869 aa17.5■□□□□ 0.39
TRPV1-206ENST00000571088 MYBBP1AQ9BQG0 1328 aaKnown RBP17.49■□□□□ 0.39
TRPV1-206ENST00000571088 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
TRPV1-206ENST00000571088 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
TRPV1-206ENST00000571088 PDE3BQ13370 1112 aa17.49■□□□□ 0.39
TRPV1-206ENST00000571088 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
TRPV1-206ENST00000571088 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
TRPV1-206ENST00000571088 FRAT1Q92837 279 aaPredicted RBP17.48■□□□□ 0.39
TRPV1-206ENST00000571088 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
TRPV1-206ENST00000571088 PTPRKQ15262 1439 aa17.46■□□□□ 0.39
TRPV1-206ENST00000571088 GOLGA6L22H0YM25 854 aa17.46■□□□□ 0.39
TRPV1-206ENST00000571088 EPRSP07814 1512 aaKnown RBP17.46■□□□□ 0.39
TRPV1-206ENST00000571088 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
TRPV1-206ENST00000571088 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
TRPV1-206ENST00000571088 PLIN1O60240 522 aa17.45■□□□□ 0.38
TRPV1-206ENST00000571088 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
TRPV1-206ENST00000571088 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
TRPV1-206ENST00000571088 CHGAP10645 457 aaKnown RBP17.43■□□□□ 0.38
TRPV1-206ENST00000571088 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
TRPV1-206ENST00000571088 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
TRPV1-206ENST00000571088 DAPK1P53355 1430 aa17.43■□□□□ 0.38
TRPV1-206ENST00000571088 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
TRPV1-206ENST00000571088 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.381e-12■■■■□ 21.2
TRPV1-206ENST00000571088 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
TRPV1-206ENST00000571088 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
TRPV1-206ENST00000571088 NFKBIBQ15653 356 aa17.41■□□□□ 0.38
TRPV1-206ENST00000571088 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
TRPV1-206ENST00000571088 MS4A1P11836 297 aa17.4■□□□□ 0.38
TRPV1-206ENST00000571088 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
TRPV1-206ENST00000571088 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
TRPV1-206ENST00000571088 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
TRPV1-206ENST00000571088 C11orf95C9JLR9 678 aaPredicted RBP17.4■□□□□ 0.38
TRPV1-206ENST00000571088 NCOA1Q15788 1441 aa17.39■□□□□ 0.37
TRPV1-206ENST00000571088 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
TRPV1-206ENST00000571088 CDK13Q14004 1512 aaKnown RBP17.39■□□□□ 0.37
TRPV1-206ENST00000571088 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms