RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
SYT1-212ENST00000552744 PTPN23Q9H3S7 1636 aa10.69□□□□□ -0.7
SYT1-212ENST00000552744 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
SYT1-212ENST00000552744 FMN1Q68DA7 1419 aa10.69□□□□□ -0.7
SYT1-212ENST00000552744 NCOA2Q15596 1464 aa10.68□□□□□ -0.7
SYT1-212ENST00000552744 MPHOSPH9Q99550 1183 aa10.67□□□□□ -0.7
SYT1-212ENST00000552744 MYOM3Q5VTT5 1437 aa10.66□□□□□ -0.7
SYT1-212ENST00000552744 DEKP35659 375 aaKnown RBP10.66□□□□□ -0.7
SYT1-212ENST00000552744 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
SYT1-212ENST00000552744 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
SYT1-212ENST00000552744 CNTLNQ9NXG0 1405 aa10.65□□□□□ -0.7
SYT1-212ENST00000552744 RIMBP3CA6NJZ7 1639 aa10.65□□□□□ -0.71
SYT1-212ENST00000552744 RIMBP3BA6NNM3 1639 aa10.65□□□□□ -0.71
SYT1-212ENST00000552744 RIMBP3Q9UFD9 1639 aa10.65□□□□□ -0.71
SYT1-212ENST00000552744 CHD1O14646 1710 aa10.64□□□□□ -0.71
SYT1-212ENST00000552744 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
SYT1-212ENST00000552744 KDM5BQ9UGL1 1544 aa10.64□□□□□ -0.71
SYT1-212ENST00000552744 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
SYT1-212ENST00000552744 NBPF8Q3BBV2 869 aa10.64□□□□□ -0.71
SYT1-212ENST00000552744 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
SYT1-212ENST00000552744 ZBED9Q6R2W3 1325 aa10.63□□□□□ -0.71
SYT1-212ENST00000552744 CCDC7Q96M83 1385 aa10.63□□□□□ -0.71
SYT1-212ENST00000552744 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
SYT1-212ENST00000552744 SNAPC4Q5SXM2 1469 aa10.63□□□□□ -0.71
SYT1-212ENST00000552744 CCDC136Q96JN2 1154 aa10.62□□□□□ -0.71
SYT1-212ENST00000552744 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
SYT1-212ENST00000552744 AKNAQ7Z591 1439 aa10.61□□□□□ -0.71
SYT1-212ENST00000552744 KIF7Q2M1P5 1343 aa10.61□□□□□ -0.71
SYT1-212ENST00000552744 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
SYT1-212ENST00000552744 DENND4BO75064 1496 aaPredicted RBP10.59□□□□□ -0.71
SYT1-212ENST00000552744 CTTNBP2Q8WZ74 1663 aa10.58□□□□□ -0.71
SYT1-212ENST00000552744 KDM6BO15054 1643 aa10.58□□□□□ -0.72
SYT1-212ENST00000552744 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
SYT1-212ENST00000552744 SUPT6HQ7KZ85 1726 aaKnown RBP10.58□□□□□ -0.72
SYT1-212ENST00000552744 LRRIQ1Q96JM4 1722 aa10.58□□□□□ -0.72
SYT1-212ENST00000552744 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
SYT1-212ENST00000552744 NCOA1Q15788 1441 aa10.57□□□□□ -0.72
SYT1-212ENST00000552744 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
SYT1-212ENST00000552744 NPM2Q86SE8 214 aaKnown RBP10.57□□□□□ -0.72
SYT1-212ENST00000552744 MAGI1Q96QZ7 1491 aaPredicted RBP10.57□□□□□ -0.72
SYT1-212ENST00000552744 ANP32AP39687 249 aaKnown RBP10.57□□□□□ -0.72
SYT1-212ENST00000552744 CLASP1Q7Z460 1538 aa10.56□□□□□ -0.72
SYT1-212ENST00000552744 ZNF644Q9H582 1327 aaPredicted RBP10.56□□□□□ -0.72
SYT1-212ENST00000552744 MAGI3Q5TCQ9 1506 aa10.55□□□□□ -0.72
SYT1-212ENST00000552744 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
SYT1-212ENST00000552744 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
SYT1-212ENST00000552744 EHBP1L1Q8N3D4 1523 aa10.54□□□□□ -0.72
SYT1-212ENST00000552744 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
SYT1-212ENST00000552744 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
SYT1-212ENST00000552744 NUDCQ9Y266 331 aa10.54□□□□□ -0.72
SYT1-212ENST00000552744 CUL7Q14999 1698 aa10.54□□□□□ -0.72
SYT1-212ENST00000552744 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
SYT1-212ENST00000552744 MYT1LQ9UL68 1186 aa10.54□□□□□ -0.72
SYT1-212ENST00000552744 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
SYT1-212ENST00000552744 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
SYT1-212ENST00000552744 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
SYT1-212ENST00000552744 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
SYT1-212ENST00000552744 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.73
SYT1-212ENST00000552744 CDK13Q14004 1512 aaKnown RBP10.52□□□□□ -0.73
SYT1-212ENST00000552744 IPO9Q96P70 1041 aaKnown RBP10.51□□□□□ -0.73
SYT1-212ENST00000552744 ANKRD30BQ9BXX2 1392 aa10.51□□□□□ -0.73
SYT1-212ENST00000552744 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
SYT1-212ENST00000552744 HECW1Q76N89 1606 aa10.51□□□□□ -0.73
SYT1-212ENST00000552744 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
SYT1-212ENST00000552744 SAMD9Q5K651 1589 aa10.49□□□□□ -0.73
SYT1-212ENST00000552744 SMG6Q86US8 1419 aaKnown RBP10.49□□□□□ -0.73
SYT1-212ENST00000552744 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
SYT1-212ENST00000552744 LAS1LQ9Y4W2 734 aaKnown RBP10.48□□□□□ -0.73
SYT1-212ENST00000552744 GCC2Q8IWJ2 1684 aa10.48□□□□□ -0.73
SYT1-212ENST00000552744 USP47Q96K76 1375 aa10.48□□□□□ -0.73
SYT1-212ENST00000552744 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
SYT1-212ENST00000552744 SPATA31E1Q6ZUB1 1445 aa10.47□□□□□ -0.73
SYT1-212ENST00000552744 EPRSP07814 1512 aaKnown RBP10.47□□□□□ -0.73
SYT1-212ENST00000552744 PNISRQ8TF01 805 aaKnown RBP10.47□□□□□ -0.73
SYT1-212ENST00000552744 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.73
SYT1-212ENST00000552744 TEX14Q8IWB6 1497 aa10.46□□□□□ -0.73
SYT1-212ENST00000552744 PKD2Q13563 968 aa10.46□□□□□ -0.73
SYT1-212ENST00000552744 EXOC6Q8TAG9 804 aa10.46□□□□□ -0.73
SYT1-212ENST00000552744 DHX29Q7Z478 1369 aaKnown RBP10.46□□□□□ -0.73
SYT1-212ENST00000552744 SYNJ2O15056 1496 aa10.46□□□□□ -0.74
SYT1-212ENST00000552744 CARD11Q9BXL7 1154 aa10.45□□□□□ -0.74
SYT1-212ENST00000552744 DAPK1P53355 1430 aa10.45□□□□□ -0.74
SYT1-212ENST00000552744 MIA2Q96PC5 1412 aa10.44□□□□□ -0.74
SYT1-212ENST00000552744 SHROOM2Q13796 1616 aa10.44□□□□□ -0.74
SYT1-212ENST00000552744 ABCC5O15440 1437 aa10.43□□□□□ -0.74
SYT1-212ENST00000552744 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
SYT1-212ENST00000552744 CFDP1Q9UEE9 299 aaPredicted RBP10.43□□□□□ -0.74
SYT1-212ENST00000552744 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
SYT1-212ENST00000552744 RNF123Q5XPI4 1314 aa10.42□□□□□ -0.74
SYT1-212ENST00000552744 NEFMP07197 916 aa10.42□□□□□ -0.74
SYT1-212ENST00000552744 ADAMTS12P58397 1594 aa10.42□□□□□ -0.74
SYT1-212ENST00000552744 PLIN1O60240 522 aa10.42□□□□□ -0.74
SYT1-212ENST00000552744 RRP1P56182 461 aaKnown RBP10.42□□□□□ -0.74
SYT1-212ENST00000552744 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
SYT1-212ENST00000552744 RCAN3Q9UKA8 241 aa10.41□□□□□ -0.74
SYT1-212ENST00000552744 BCORL1Q5H9F3 1711 aa10.4□□□□□ -0.74
SYT1-212ENST00000552744 PDE4AP27815 886 aa10.4□□□□□ -0.74
SYT1-212ENST00000552744 DCAF11Q8TEB1 546 aa10.4□□□□□ -0.74
SYT1-212ENST00000552744 ANO8Q9HCE9 1232 aaPredicted RBP10.4□□□□□ -0.74
SYT1-212ENST00000552744 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms