RNA–Protein interactions for RNA: ENST00000549733.5

NPIPB12-204, Transcript of nuclear pore complex interacting protein family, member B12, human

TSL 4

Gene NPIPB12, Length 797 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB12-204	ENST00000549733	COLQ	Q9Y215	455 aa	Predicted RBP	11.27	□□□□□ -0.61
NPIPB12-204	ENST00000549733	POTEB2	H3BUK9	544 aa		11.26	□□□□□ -0.61
NPIPB12-204	ENST00000549733	CABP2	Q9NPB3	220 aa		11.26	□□□□□ -0.61
NPIPB12-204	ENST00000549733	IRX5	P78411	483 aa	Predicted RBP	11.25	□□□□□ -0.61
NPIPB12-204	ENST00000549733	GOLGA2	Q08379	1002 aa		11.25	□□□□□ -0.61
NPIPB12-204	ENST00000549733	CCDC88B	A6NC98	1476 aa		11.24	□□□□□ -0.61
NPIPB12-204	ENST00000549733	SEC24B	O95487	1268 aa		11.23	□□□□□ -0.61
NPIPB12-204	ENST00000549733	MKRN3	Q13064	507 aa	Known RBP	11.23	□□□□□ -0.61
NPIPB12-204	ENST00000549733	AQR	O60306	1485 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
NPIPB12-204	ENST00000549733	PLCG2	P16885	1265 aa		11.2	□□□□□ -0.62
NPIPB12-204	ENST00000549733	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB12-204	ENST00000549733	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.2	□□□□□ -0.62
NPIPB12-204	ENST00000549733	EIF4G3	O43432	1585 aa	Known RBP	11.2	□□□□□ -0.62
NPIPB12-204	ENST00000549733	TOPBP1	Q92547	1522 aa		11.19	□□□□□ -0.62
NPIPB12-204	ENST00000549733	STK25	O00506	426 aa		11.19	□□□□□ -0.62
NPIPB12-204	ENST00000549733	POTEJ	P0CG39	1038 aa		11.19	□□□□□ -0.62
NPIPB12-204	ENST00000549733	EFCAB3	Q8N7B9	438 aa		11.19	□□□□□ -0.62
NPIPB12-204	ENST00000549733	OCEL1	Q9H607	264 aa		11.19	□□□□□ -0.62
NPIPB12-204	ENST00000549733	ILDR1	Q86SU0	546 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB12-204	ENST00000549733	PDCD7	Q8N8D1	485 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB12-204	ENST00000549733	STK24	Q9Y6E0	443 aa		11.17	□□□□□ -0.62
NPIPB12-204	ENST00000549733	CHD1	O14646	1710 aa		11.16	□□□□□ -0.62
NPIPB12-204	ENST00000549733	RTN4	Q9NQC3	1192 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB12-204	ENST00000549733	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
NPIPB12-204	ENST00000549733	ABCC8	Q09428	1581 aa		11.15	□□□□□ -0.62
NPIPB12-204	ENST00000549733	CLASP1	Q7Z460	1538 aa		11.13	□□□□□ -0.63
NPIPB12-204	ENST00000549733	TARBP1	Q13395	1621 aa	Known RBP	11.13	□□□□□ -0.63
NPIPB12-204	ENST00000549733	HS6ST3	Q8IZP7	471 aa		11.12	□□□□□ -0.63
NPIPB12-204	ENST00000549733	OTUD5	Q96G74	571 aa		11.12	□□□□□ -0.63
NPIPB12-204	ENST00000549733	SOX12	O15370	315 aa		11.11	□□□□□ -0.63
NPIPB12-204	ENST00000549733	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB12-204	ENST00000549733	DNMBP	Q6XZF7	1577 aa		11.08	□□□□□ -0.64
NPIPB12-204	ENST00000549733	CHGA	P10645	457 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB12-204	ENST00000549733	MAMSTR	Q6ZN01	415 aa		11.08	□□□□□ -0.64
NPIPB12-204	ENST00000549733	PRDM2	Q13029	1718 aa		11.07	□□□□□ -0.64
NPIPB12-204	ENST00000549733	DPY19L2	Q6NUT2	758 aa		11.07	□□□□□ -0.64
NPIPB12-204	ENST00000549733	PHF8	Q9UPP1	1060 aa		11.07	□□□□□ -0.64
NPIPB12-204	ENST00000549733	SCUBE2	Q9NQ36	999 aa		11.06	□□□□□ -0.64
NPIPB12-204	ENST00000549733	POLA1	P09884	1462 aa	Predicted RBP	11.06	□□□□□ -0.64
NPIPB12-204	ENST00000549733	TDRD9	Q8NDG6	1382 aa	Known RBP	11.05	□□□□□ -0.64
NPIPB12-204	ENST00000549733	LOC105371045	A0A1W2PR82	267 aa		11.05	□□□□□ -0.64
NPIPB12-204	ENST00000549733	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.05	□□□□□ -0.64
NPIPB12-204	ENST00000549733	MS4A4A	Q96JQ5	239 aa		11.05	□□□□□ -0.64
NPIPB12-204	ENST00000549733	MFRP	Q9BY79	579 aa		11.05	□□□□□ -0.64
NPIPB12-204	ENST00000549733	GAPVD1	Q14C86	1478 aa		11.05	□□□□□ -0.64
NPIPB12-204	ENST00000549733	FBXO22	Q8NEZ5	403 aa		11.04	□□□□□ -0.64
NPIPB12-204	ENST00000549733	NLRP6	P59044	892 aa		11.03	□□□□□ -0.64
NPIPB12-204	ENST00000549733	SYNJ1	O43426	1573 aa		11.03	□□□□□ -0.64
NPIPB12-204	ENST00000549733	SNAPC4	Q5SXM2	1469 aa		11.02	□□□□□ -0.65
NPIPB12-204	ENST00000549733	RAD54L2	Q9Y4B4	1467 aa		11.02	□□□□□ -0.65
NPIPB12-204	ENST00000549733	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.02	□□□□□ -0.65
NPIPB12-204	ENST00000549733	SOGA1	O94964	1423 aa		11.01	□□□□□ -0.65
NPIPB12-204	ENST00000549733	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11	□□□□□ -0.65
NPIPB12-204	ENST00000549733	KDM4F	A0A1W2PPD8	638 aa		10.99	□□□□□ -0.65
NPIPB12-204	ENST00000549733	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.99	□□□□□ -0.65
NPIPB12-204	ENST00000549733	SYNJ2	O15056	1496 aa		10.99	□□□□□ -0.65
NPIPB12-204	ENST00000549733	BOLA1	Q9Y3E2	137 aa		10.98	□□□□□ -0.65
NPIPB12-204	ENST00000549733	NKX1-1	Q15270	411 aa	Predicted RBP	10.97	□□□□□ -0.65
NPIPB12-204	ENST00000549733	WDR97	A6NE52	1622 aa		10.97	□□□□□ -0.65
NPIPB12-204	ENST00000549733	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.96	□□□□□ -0.65
NPIPB12-204	ENST00000549733	GRIN2B	Q13224	1484 aa		10.95	□□□□□ -0.66
NPIPB12-204	ENST00000549733	C3orf67	Q6ZVT6	689 aa		10.95	□□□□□ -0.66
NPIPB12-204	ENST00000549733		G3V3G9	751 aa		10.94	□□□□□ -0.66
NPIPB12-204	ENST00000549733	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.94	□□□□□ -0.66
NPIPB12-204	ENST00000549733	MICALL2	Q8IY33	904 aa		10.93	□□□□□ -0.66
NPIPB12-204	ENST00000549733	SLAIN1	Q8ND83	568 aa		10.92	□□□□□ -0.66
NPIPB12-204	ENST00000549733	ERCC6L2	Q5T890	1561 aa		10.9	□□□□□ -0.66
NPIPB12-204	ENST00000549733	EEA1	Q15075	1411 aa		10.9	□□□□□ -0.66
NPIPB12-204	ENST00000549733	FGD5	Q6ZNL6	1462 aa		10.89	□□□□□ -0.67
NPIPB12-204	ENST00000549733	PPP1R37	O75864	691 aa		10.87	□□□□□ -0.67
NPIPB12-204	ENST00000549733	KIF13A	Q9H1H9	1805 aa		10.86	□□□□□ -0.67
NPIPB12-204	ENST00000549733	FAM69C	Q0P6D2	419 aa		10.85	□□□□□ -0.67
NPIPB12-204	ENST00000549733	ABCC10	Q5T3U5	1492 aa		10.85	□□□□□ -0.67
NPIPB12-204	ENST00000549733	RYDEN	Q9NUL5	291 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB12-204	ENST00000549733	NUP160	Q12769	1436 aa		10.84	□□□□□ -0.67
NPIPB12-204	ENST00000549733	CEP170	Q5SW79	1584 aa		10.83	□□□□□ -0.68
NPIPB12-204	ENST00000549733	GTPBP6	O43824	516 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB12-204	ENST00000549733	UBTF	P17480	764 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB12-204	ENST00000549733	TMEM92	Q6UXU6	159 aa		10.82	□□□□□ -0.68
NPIPB12-204	ENST00000549733	CUX1	P39880	1505 aa		10.82	□□□□□ -0.68
NPIPB12-204	ENST00000549733	BBX	Q8WY36	941 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB12-204	ENST00000549733	GRIN2A	Q12879	1464 aa		10.81	□□□□□ -0.68
NPIPB12-204	ENST00000549733	TOP2B	Q02880	1626 aa		10.8	□□□□□ -0.68
NPIPB12-204	ENST00000549733	SHROOM2	Q13796	1616 aa		10.79	□□□□□ -0.68
NPIPB12-204	ENST00000549733	RUSC2	Q8N2Y8	1516 aa		10.78	□□□□□ -0.68
NPIPB12-204	ENST00000549733	ABCA10	Q8WWZ4	1543 aa		10.78	□□□□□ -0.68
NPIPB12-204	ENST00000549733	MAPKBP1	O60336	1514 aa		10.77	□□□□□ -0.69
NPIPB12-204	ENST00000549733	ABCA5	Q8WWZ7	1642 aa		10.76	□□□□□ -0.69
NPIPB12-204	ENST00000549733	PBRM1	Q86U86	1689 aa		10.76	□□□□□ -0.69
NPIPB12-204	ENST00000549733	LCE2D	Q5TA82	110 aa	Predicted RBP	10.75	□□□□□ -0.69
NPIPB12-204	ENST00000549733	BIVM-ERCC5	R4GMW8	1640 aa		10.75	□□□□□ -0.69
NPIPB12-204	ENST00000549733	KDM6B	O15054	1643 aa		10.74	□□□□□ -0.69
NPIPB12-204	ENST00000549733	JPH4	Q96JJ6	628 aa		10.74	□□□□□ -0.69
NPIPB12-204	ENST00000549733	KIF27	Q86VH2	1401 aa		10.74	□□□□□ -0.69
NPIPB12-204	ENST00000549733	PRG4	Q92954	1404 aa	Predicted RBP	10.74	□□□□□ -0.69
NPIPB12-204	ENST00000549733	GOLGA3	Q08378	1498 aa		10.74	□□□□□ -0.69
NPIPB12-204	ENST00000549733	DIP2B	Q9P265	1576 aa		10.73	□□□□□ -0.69
NPIPB12-204	ENST00000549733	SNPH	O15079	494 aa		10.73	□□□□□ -0.69
NPIPB12-204	ENST00000549733	TNIK	Q9UKE5	1360 aa		10.73	□□□□□ -0.69
NPIPB12-204	ENST00000549733	KIF3C	O14782	793 aa		10.72	□□□□□ -0.69

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