RNA–Protein interactions for RNA: ENST00000549733.5

NPIPB12-204, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 4

Gene NPIPB12, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-204ENST00000549733 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
NPIPB12-204ENST00000549733 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
NPIPB12-204ENST00000549733 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
NPIPB12-204ENST00000549733 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
NPIPB12-204ENST00000549733 FOXD1Q16676 465 aa18.53■□□□□ 0.56
NPIPB12-204ENST00000549733 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
NPIPB12-204ENST00000549733 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
NPIPB12-204ENST00000549733 ADRA2BP18089 450 aa17.64■□□□□ 0.41
NPIPB12-204ENST00000549733 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
NPIPB12-204ENST00000549733 MSH5O43196 834 aa17.15■□□□□ 0.34
NPIPB12-204ENST00000549733 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
NPIPB12-204ENST00000549733 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
NPIPB12-204ENST00000549733 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
NPIPB12-204ENST00000549733 POTEDQ86YR6 584 aa16■□□□□ 0.15
NPIPB12-204ENST00000549733 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
NPIPB12-204ENST00000549733 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
NPIPB12-204ENST00000549733 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
NPIPB12-204ENST00000549733 KCNA4P22459 653 aa15.54■□□□□ 0.08
NPIPB12-204ENST00000549733 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
NPIPB12-204ENST00000549733 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
NPIPB12-204ENST00000549733 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
NPIPB12-204ENST00000549733 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
NPIPB12-204ENST00000549733 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
NPIPB12-204ENST00000549733 NISCHQ9Y2I1 1504 aa14.94□□□□□ -0.02
NPIPB12-204ENST00000549733 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
NPIPB12-204ENST00000549733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
NPIPB12-204ENST00000549733 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
NPIPB12-204ENST00000549733 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
NPIPB12-204ENST00000549733 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
NPIPB12-204ENST00000549733 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
NPIPB12-204ENST00000549733 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
NPIPB12-204ENST00000549733 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
NPIPB12-204ENST00000549733 ZBTB22O15209 634 aa14.32□□□□□ -0.12
NPIPB12-204ENST00000549733 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
NPIPB12-204ENST00000549733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
NPIPB12-204ENST00000549733 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
NPIPB12-204ENST00000549733 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
NPIPB12-204ENST00000549733 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
NPIPB12-204ENST00000549733 APLP2Q06481 763 aa14.11□□□□□ -0.15
NPIPB12-204ENST00000549733 CAPN15O75808 1086 aa14.07□□□□□ -0.16
NPIPB12-204ENST00000549733 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
NPIPB12-204ENST00000549733 ABCC9O60706 1549 aa14.06□□□□□ -0.16
NPIPB12-204ENST00000549733 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
NPIPB12-204ENST00000549733 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
NPIPB12-204ENST00000549733 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
NPIPB12-204ENST00000549733 DSG3P32926 999 aa13.91□□□□□ -0.18
NPIPB12-204ENST00000549733 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
NPIPB12-204ENST00000549733 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
NPIPB12-204ENST00000549733 ABCB7O75027 752 aa13.8□□□□□ -0.2
NPIPB12-204ENST00000549733 POLA2Q14181 598 aa13.68□□□□□ -0.22
NPIPB12-204ENST00000549733 CCDC180Q9P1Z9 1646 aa13.54□□□□□ -0.24
NPIPB12-204ENST00000549733 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
NPIPB12-204ENST00000549733 FBLN2P98095 1184 aa13.3□□□□□ -0.28
NPIPB12-204ENST00000549733 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
NPIPB12-204ENST00000549733 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
NPIPB12-204ENST00000549733 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
NPIPB12-204ENST00000549733 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
NPIPB12-204ENST00000549733 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
NPIPB12-204ENST00000549733 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
NPIPB12-204ENST00000549733 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
NPIPB12-204ENST00000549733 PABPN1Q86U42 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
NPIPB12-204ENST00000549733 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
NPIPB12-204ENST00000549733 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
NPIPB12-204ENST00000549733 NACADO15069 1562 aa12.98□□□□□ -0.33
NPIPB12-204ENST00000549733 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
NPIPB12-204ENST00000549733 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
NPIPB12-204ENST00000549733 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
NPIPB12-204ENST00000549733 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
NPIPB12-204ENST00000549733 BICRAQ9NZM4 1560 aa12.84□□□□□ -0.35
NPIPB12-204ENST00000549733 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
NPIPB12-204ENST00000549733 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
NPIPB12-204ENST00000549733 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
NPIPB12-204ENST00000549733 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
NPIPB12-204ENST00000549733 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
NPIPB12-204ENST00000549733 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
NPIPB12-204ENST00000549733 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
NPIPB12-204ENST00000549733 FKBP8Q14318 412 aa12.68□□□□□ -0.38
NPIPB12-204ENST00000549733 PROM2Q8N271 834 aa12.68□□□□□ -0.38
NPIPB12-204ENST00000549733 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
NPIPB12-204ENST00000549733 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
NPIPB12-204ENST00000549733 SHROOM4Q9ULL8 1493 aa12.64□□□□□ -0.39
NPIPB12-204ENST00000549733 POTEHQ6S545 545 aa12.62□□□□□ -0.39
NPIPB12-204ENST00000549733 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
NPIPB12-204ENST00000549733 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
NPIPB12-204ENST00000549733 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
NPIPB12-204ENST00000549733 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
NPIPB12-204ENST00000549733 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
NPIPB12-204ENST00000549733 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
NPIPB12-204ENST00000549733 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
NPIPB12-204ENST00000549733 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
NPIPB12-204ENST00000549733 CUX2O14529 1486 aa12.36□□□□□ -0.43
NPIPB12-204ENST00000549733 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
NPIPB12-204ENST00000549733 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
NPIPB12-204ENST00000549733 SCRIBQ14160 1630 aa12.29□□□□□ -0.44
NPIPB12-204ENST00000549733 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
NPIPB12-204ENST00000549733 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
NPIPB12-204ENST00000549733 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
NPIPB12-204ENST00000549733 HAX1O00165 279 aa12.21□□□□□ -0.45
NPIPB12-204ENST00000549733 MIER1Q8N108 512 aa12.2□□□□□ -0.46
NPIPB12-204ENST00000549733 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms