RNA–Protein interactions for RNA: ENST00000530839.5

MS4A6A-213, Transcript of membrane spanning 4-domains A6A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MS4A6A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-213ENST00000530839 CFTRP13569 1480 aa13.33□□□□□ -0.28
MS4A6A-213ENST00000530839 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
MS4A6A-213ENST00000530839 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
MS4A6A-213ENST00000530839 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
MS4A6A-213ENST00000530839 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
MS4A6A-213ENST00000530839 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
MS4A6A-213ENST00000530839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.28
MS4A6A-213ENST00000530839 PSEN1P49768 467 aa13.28□□□□□ -0.28
MS4A6A-213ENST00000530839 EMP3P54852 163 aa13.27□□□□□ -0.29
MS4A6A-213ENST00000530839 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
MS4A6A-213ENST00000530839 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
MS4A6A-213ENST00000530839 ILDR1Q86SU0 546 aaPredicted RBP13.23□□□□□ -0.29
MS4A6A-213ENST00000530839 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
MS4A6A-213ENST00000530839 G3V3G9 751 aa13.17□□□□□ -0.3
MS4A6A-213ENST00000530839 HS3ST6Q96QI5 342 aa13.17□□□□□ -0.3
MS4A6A-213ENST00000530839 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.31
MS4A6A-213ENST00000530839 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
MS4A6A-213ENST00000530839 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
MS4A6A-213ENST00000530839 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
MS4A6A-213ENST00000530839 KRTAP3-3Q9BYR6 98 aa13.11□□□□□ -0.31
MS4A6A-213ENST00000530839 KRTAP3-2Q9BYR7 98 aa13.11□□□□□ -0.31
MS4A6A-213ENST00000530839 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
MS4A6A-213ENST00000530839 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
MS4A6A-213ENST00000530839 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
MS4A6A-213ENST00000530839 CABP2Q9NPB3 220 aa13.09□□□□□ -0.31
MS4A6A-213ENST00000530839 ZNF608Q9ULD9 1512 aaPredicted RBP13.09□□□□□ -0.31
MS4A6A-213ENST00000530839 RIMBP3CA6NJZ7 1639 aa13.08□□□□□ -0.32
MS4A6A-213ENST00000530839 RIMBP3BA6NNM3 1639 aa13.08□□□□□ -0.32
MS4A6A-213ENST00000530839 RIMBP3Q9UFD9 1639 aa13.08□□□□□ -0.32
MS4A6A-213ENST00000530839 POTEB3A0JP26 581 aa13.07□□□□□ -0.32
MS4A6A-213ENST00000530839 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
MS4A6A-213ENST00000530839 POTEBQ6S5H4 581 aa13.07□□□□□ -0.32
MS4A6A-213ENST00000530839 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
MS4A6A-213ENST00000530839 DNMBPQ6XZF7 1577 aa13.05□□□□□ -0.32
MS4A6A-213ENST00000530839 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
MS4A6A-213ENST00000530839 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
MS4A6A-213ENST00000530839 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
MS4A6A-213ENST00000530839 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
MS4A6A-213ENST00000530839 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
MS4A6A-213ENST00000530839 ARHGEF11O15085 1522 aa13.01□□□□□ -0.33
MS4A6A-213ENST00000530839 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
MS4A6A-213ENST00000530839 CHD1O14646 1710 aa12.99□□□□□ -0.33
MS4A6A-213ENST00000530839 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
MS4A6A-213ENST00000530839 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
MS4A6A-213ENST00000530839 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.33
MS4A6A-213ENST00000530839 ERBB3P21860 1342 aa12.96□□□□□ -0.34
MS4A6A-213ENST00000530839 POLA1P09884 1462 aaPredicted RBP12.94□□□□□ -0.34
MS4A6A-213ENST00000530839 CYB5RLQ6IPT4 315 aa12.92□□□□□ -0.34
MS4A6A-213ENST00000530839 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
MS4A6A-213ENST00000530839 SOGA1O94964 1423 aa12.9□□□□□ -0.34
MS4A6A-213ENST00000530839 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
MS4A6A-213ENST00000530839 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
MS4A6A-213ENST00000530839 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
MS4A6A-213ENST00000530839 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
MS4A6A-213ENST00000530839 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
MS4A6A-213ENST00000530839 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
MS4A6A-213ENST00000530839 SOX12O15370 315 aa12.84□□□□□ -0.35
MS4A6A-213ENST00000530839 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
MS4A6A-213ENST00000530839 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
MS4A6A-213ENST00000530839 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
MS4A6A-213ENST00000530839 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
MS4A6A-213ENST00000530839 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
MS4A6A-213ENST00000530839 CUX1P39880 1505 aa12.82□□□□□ -0.36
MS4A6A-213ENST00000530839 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
MS4A6A-213ENST00000530839 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
MS4A6A-213ENST00000530839 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
MS4A6A-213ENST00000530839 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
MS4A6A-213ENST00000530839 ZNF687Q8N1G0 1237 aa12.8□□□□□ -0.36
MS4A6A-213ENST00000530839 PTGER2P43116 358 aa12.79□□□□□ -0.36
MS4A6A-213ENST00000530839 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
MS4A6A-213ENST00000530839 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
MS4A6A-213ENST00000530839 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
MS4A6A-213ENST00000530839 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
MS4A6A-213ENST00000530839 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
MS4A6A-213ENST00000530839 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
MS4A6A-213ENST00000530839 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
MS4A6A-213ENST00000530839 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
MS4A6A-213ENST00000530839 ABCA10Q8WWZ4 1543 aa12.71□□□□□ -0.38
MS4A6A-213ENST00000530839 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
MS4A6A-213ENST00000530839 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
MS4A6A-213ENST00000530839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
MS4A6A-213ENST00000530839 ZFP91Q96JP5 570 aaPredicted RBP12.68□□□□□ -0.38
MS4A6A-213ENST00000530839 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
MS4A6A-213ENST00000530839 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
MS4A6A-213ENST00000530839 NLRP6P59044 892 aa12.64□□□□□ -0.39
MS4A6A-213ENST00000530839 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
MS4A6A-213ENST00000530839 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
MS4A6A-213ENST00000530839 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
MS4A6A-213ENST00000530839 RNF25Q96BH1 459 aaPredicted RBP12.63□□□□□ -0.39
MS4A6A-213ENST00000530839 GRIN2AQ12879 1464 aa12.62□□□□□ -0.39
MS4A6A-213ENST00000530839 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
MS4A6A-213ENST00000530839 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
MS4A6A-213ENST00000530839 ADAMTS12P58397 1594 aa12.61□□□□□ -0.39
MS4A6A-213ENST00000530839 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
MS4A6A-213ENST00000530839 NUP160Q12769 1436 aa12.59□□□□□ -0.39
MS4A6A-213ENST00000530839 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
MS4A6A-213ENST00000530839 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
MS4A6A-213ENST00000530839 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.4
MS4A6A-213ENST00000530839 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
MS4A6A-213ENST00000530839 SHROOM2Q13796 1616 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms