RNA–Protein interactions for RNA: ENST00000530839.5

MS4A6A-213, Transcript of membrane spanning 4-domains A6A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MS4A6A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-213ENST00000530839 AEBP2Q6ZN18 517 aaPredicted RBP29.45■■■□□ 2.31
MS4A6A-213ENST00000530839 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
MS4A6A-213ENST00000530839 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
MS4A6A-213ENST00000530839 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
MS4A6A-213ENST00000530839 FOXD1Q16676 465 aa23.55■■□□□ 1.36
MS4A6A-213ENST00000530839 MSH5O43196 834 aa22.31■■□□□ 1.16
MS4A6A-213ENST00000530839 POTEDQ86YR6 584 aa22.25■■□□□ 1.15
MS4A6A-213ENST00000530839 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
MS4A6A-213ENST00000530839 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
MS4A6A-213ENST00000530839 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
MS4A6A-213ENST00000530839 ADRA2BP18089 450 aa21.61■■□□□ 1.05
MS4A6A-213ENST00000530839 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
MS4A6A-213ENST00000530839 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
MS4A6A-213ENST00000530839 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
MS4A6A-213ENST00000530839 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
MS4A6A-213ENST00000530839 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
MS4A6A-213ENST00000530839 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
MS4A6A-213ENST00000530839 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
MS4A6A-213ENST00000530839 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
MS4A6A-213ENST00000530839 RNF39Q9H2S5 420 aa18.93■□□□□ 0.62
MS4A6A-213ENST00000530839 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
MS4A6A-213ENST00000530839 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
MS4A6A-213ENST00000530839 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
MS4A6A-213ENST00000530839 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
MS4A6A-213ENST00000530839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
MS4A6A-213ENST00000530839 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
MS4A6A-213ENST00000530839 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
MS4A6A-213ENST00000530839 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
MS4A6A-213ENST00000530839 CAPN15O75808 1086 aa17.61■□□□□ 0.41
MS4A6A-213ENST00000530839 DSG3P32926 999 aa17.59■□□□□ 0.41
MS4A6A-213ENST00000530839 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
MS4A6A-213ENST00000530839 APLP2Q06481 763 aa17.43■□□□□ 0.38
MS4A6A-213ENST00000530839 POTEHQ6S545 545 aa17.4■□□□□ 0.38
MS4A6A-213ENST00000530839 KCNA4P22459 653 aa17.38■□□□□ 0.37
MS4A6A-213ENST00000530839 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
MS4A6A-213ENST00000530839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
MS4A6A-213ENST00000530839 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
MS4A6A-213ENST00000530839 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
MS4A6A-213ENST00000530839 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
MS4A6A-213ENST00000530839 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
MS4A6A-213ENST00000530839 ABCB7O75027 752 aa17.1■□□□□ 0.33
MS4A6A-213ENST00000530839 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
MS4A6A-213ENST00000530839 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
MS4A6A-213ENST00000530839 POLA2Q14181 598 aa16.69■□□□□ 0.26
MS4A6A-213ENST00000530839 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
MS4A6A-213ENST00000530839 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
MS4A6A-213ENST00000530839 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
MS4A6A-213ENST00000530839 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
MS4A6A-213ENST00000530839 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
MS4A6A-213ENST00000530839 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
MS4A6A-213ENST00000530839 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
MS4A6A-213ENST00000530839 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
MS4A6A-213ENST00000530839 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
MS4A6A-213ENST00000530839 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
MS4A6A-213ENST00000530839 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
MS4A6A-213ENST00000530839 ABCC9O60706 1549 aa16.03■□□□□ 0.16
MS4A6A-213ENST00000530839 PITPNM1O00562 1244 aa16■□□□□ 0.15
MS4A6A-213ENST00000530839 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
MS4A6A-213ENST00000530839 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.15
MS4A6A-213ENST00000530839 ZBTB22O15209 634 aa15.93■□□□□ 0.14
MS4A6A-213ENST00000530839 HAX1O00165 279 aa15.91■□□□□ 0.14
MS4A6A-213ENST00000530839 SPDYE2BA6NHP3 402 aa15.87■□□□□ 0.13
MS4A6A-213ENST00000530839 SPDYE6P0CI01 402 aa15.87■□□□□ 0.13
MS4A6A-213ENST00000530839 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
MS4A6A-213ENST00000530839 FBLN2P98095 1184 aa15.87■□□□□ 0.13
MS4A6A-213ENST00000530839 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
MS4A6A-213ENST00000530839 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
MS4A6A-213ENST00000530839 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
MS4A6A-213ENST00000530839 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
MS4A6A-213ENST00000530839 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
MS4A6A-213ENST00000530839 EVX2Q03828 476 aa15.58■□□□□ 0.08
MS4A6A-213ENST00000530839 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
MS4A6A-213ENST00000530839 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
MS4A6A-213ENST00000530839 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
MS4A6A-213ENST00000530839 GABBR2O75899 941 aa15.31■□□□□ 0.04
MS4A6A-213ENST00000530839 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
MS4A6A-213ENST00000530839 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
MS4A6A-213ENST00000530839 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
MS4A6A-213ENST00000530839 CLCN6P51797 869 aa15.15■□□□□ 0.02
MS4A6A-213ENST00000530839 LHX8Q68G74 356 aa15.15■□□□□ 0.02
MS4A6A-213ENST00000530839 NACADO15069 1562 aa15.13■□□□□ 0.01
MS4A6A-213ENST00000530839 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
MS4A6A-213ENST00000530839 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
MS4A6A-213ENST00000530839 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
MS4A6A-213ENST00000530839 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
MS4A6A-213ENST00000530839 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
MS4A6A-213ENST00000530839 POTEIP0CG38 1075 aa14.92□□□□□ -0.02
MS4A6A-213ENST00000530839 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
MS4A6A-213ENST00000530839 MYO15BQ96JP2 1530 aa14.89□□□□□ -0.03
MS4A6A-213ENST00000530839 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
MS4A6A-213ENST00000530839 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
MS4A6A-213ENST00000530839 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
MS4A6A-213ENST00000530839 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
MS4A6A-213ENST00000530839 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
MS4A6A-213ENST00000530839 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
MS4A6A-213ENST00000530839 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
MS4A6A-213ENST00000530839 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
MS4A6A-213ENST00000530839 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
MS4A6A-213ENST00000530839 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
MS4A6A-213ENST00000530839 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms