RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
CDH9-203ENST00000505045 CFTRP13569 1480 aa9.09□□□□□ -0.95
CDH9-203ENST00000505045 PRDM2Q13029 1718 aa9.09□□□□□ -0.95
CDH9-203ENST00000505045 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
CDH9-203ENST00000505045 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
CDH9-203ENST00000505045 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
CDH9-203ENST00000505045 IRX5P78411 483 aaPredicted RBP9.06□□□□□ -0.96
CDH9-203ENST00000505045 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
CDH9-203ENST00000505045 CCDC88BA6NC98 1476 aa9.06□□□□□ -0.96
CDH9-203ENST00000505045 URB2Q14146 1524 aaKnown RBP9.03□□□□□ -0.96
CDH9-203ENST00000505045 PCDHB8Q9UN66 801 aa9.03□□□□□ -0.96
CDH9-203ENST00000505045 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
CDH9-203ENST00000505045 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
CDH9-203ENST00000505045 TMEM106CQ9BVX2 250 aa8.99□□□□□ -0.97
CDH9-203ENST00000505045 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
CDH9-203ENST00000505045 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
CDH9-203ENST00000505045 TOPBP1Q92547 1522 aa8.93□□□□□ -0.98
CDH9-203ENST00000505045 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
CDH9-203ENST00000505045 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
CDH9-203ENST00000505045 ZNF608Q9ULD9 1512 aaPredicted RBP8.91□□□□□ -0.98
CDH9-203ENST00000505045 DNMBPQ6XZF7 1577 aa8.91□□□□□ -0.98
CDH9-203ENST00000505045 PTGER2P43116 358 aa8.91□□□□□ -0.98
CDH9-203ENST00000505045 PSEN1P49768 467 aa8.91□□□□□ -0.98
CDH9-203ENST00000505045 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
CDH9-203ENST00000505045 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
CDH9-203ENST00000505045 ERBB3P21860 1342 aa8.89□□□□□ -0.99
CDH9-203ENST00000505045 TARBP1Q13395 1621 aaKnown RBP8.88□□□□□ -0.99
CDH9-203ENST00000505045 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
CDH9-203ENST00000505045 IFT140Q96RY7 1462 aa8.87□□□□□ -0.99
CDH9-203ENST00000505045 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
CDH9-203ENST00000505045 CUX1P39880 1505 aa8.84□□□□□ -0.99
CDH9-203ENST00000505045 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
CDH9-203ENST00000505045 ABCC8Q09428 1581 aa8.83□□□□□ -1
CDH9-203ENST00000505045 PKD2Q13563 968 aa8.83□□□□□ -1
CDH9-203ENST00000505045 ILDR1Q86SU0 546 aaPredicted RBP8.83□□□□□ -1
CDH9-203ENST00000505045 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
CDH9-203ENST00000505045 RAD54L2Q9Y4B4 1467 aa8.82□□□□□ -1
CDH9-203ENST00000505045 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
CDH9-203ENST00000505045 CHD1O14646 1710 aa8.81□□□□□ -1
CDH9-203ENST00000505045 FGD5Q6ZNL6 1462 aa8.81□□□□□ -1
CDH9-203ENST00000505045 PDCD7Q8N8D1 485 aaKnown RBP8.81□□□□□ -1
CDH9-203ENST00000505045 WDR97A6NE52 1622 aa8.81□□□□□ -1
CDH9-203ENST00000505045 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -1
CDH9-203ENST00000505045 VARS2Q5ST30 1063 aaKnown RBP8.8□□□□□ -1
CDH9-203ENST00000505045 MKRN3Q13064 507 aaKnown RBP8.78□□□□□ -1
CDH9-203ENST00000505045 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1
CDH9-203ENST00000505045 HOXB3P14651 431 aaPredicted RBP8.77□□□□□ -1
CDH9-203ENST00000505045 CABP2Q9NPB3 220 aa8.77□□□□□ -1
CDH9-203ENST00000505045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.76□□□□□ -1.01
CDH9-203ENST00000505045 ECM2O94769 699 aaPredicted RBP8.76□□□□□ -1.01
CDH9-203ENST00000505045 ZFP91Q96JP5 570 aaPredicted RBP8.76□□□□□ -1.01
CDH9-203ENST00000505045 RIMBP3CA6NJZ7 1639 aa8.76□□□□□ -1.01
CDH9-203ENST00000505045 RIMBP3BA6NNM3 1639 aa8.76□□□□□ -1.01
CDH9-203ENST00000505045 RIMBP3Q9UFD9 1639 aa8.76□□□□□ -1.01
CDH9-203ENST00000505045 SOGA1O94964 1423 aa8.76□□□□□ -1.01
CDH9-203ENST00000505045 GOLGA2Q08379 1002 aa8.75□□□□□ -1.01
CDH9-203ENST00000505045 ZNF710Q8N1W2 664 aa8.75□□□□□ -1.01
CDH9-203ENST00000505045 L3MBTL3Q96JM7 780 aaPredicted RBP8.75□□□□□ -1.01
CDH9-203ENST00000505045 TDRD9Q8NDG6 1382 aaKnown RBP8.75□□□□□ -1.01
CDH9-203ENST00000505045 PBRM1Q86U86 1689 aa8.75□□□□□ -1.01
CDH9-203ENST00000505045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDH9-203ENST00000505045 SYNJ1O43426 1573 aa8.74□□□□□ -1.01
CDH9-203ENST00000505045 ZNF687Q8N1G0 1237 aa8.74□□□□□ -1.01
CDH9-203ENST00000505045 IRX2Q9BZI1 471 aaPredicted RBP8.74□□□□□ -1.01
CDH9-203ENST00000505045 SNAPC4Q5SXM2 1469 aa8.74□□□□□ -1.01
CDH9-203ENST00000505045 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
CDH9-203ENST00000505045 BIVM-ERCC5R4GMW8 1640 aa8.73□□□□□ -1.01
CDH9-203ENST00000505045 RGL2O15211 777 aa8.73□□□□□ -1.01
CDH9-203ENST00000505045 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
CDH9-203ENST00000505045 ARHGEF11O15085 1522 aa8.72□□□□□ -1.01
CDH9-203ENST00000505045 ANKRD13DQ6ZTN6 518 aa8.71□□□□□ -1.01
CDH9-203ENST00000505045 TOP2BQ02880 1626 aa8.71□□□□□ -1.02
CDH9-203ENST00000505045 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
CDH9-203ENST00000505045 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
CDH9-203ENST00000505045 CLASP1Q7Z460 1538 aa8.69□□□□□ -1.02
CDH9-203ENST00000505045 GRIN2BQ13224 1484 aa8.68□□□□□ -1.02
CDH9-203ENST00000505045 MAGI1Q96QZ7 1491 aaPredicted RBP8.68□□□□□ -1.02
CDH9-203ENST00000505045 TAOK2Q9UL54 1235 aa8.68□□□□□ -1.02
CDH9-203ENST00000505045 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
CDH9-203ENST00000505045 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
CDH9-203ENST00000505045 SOX12O15370 315 aa8.67□□□□□ -1.02
CDH9-203ENST00000505045 HCSTQ9UBK5 93 aa8.67□□□□□ -1.02
CDH9-203ENST00000505045 BCL11BQ9C0K0 894 aaPredicted RBP8.66□□□□□ -1.02
CDH9-203ENST00000505045 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
CDH9-203ENST00000505045 SYNJ2O15056 1496 aa8.65□□□□□ -1.02
CDH9-203ENST00000505045 ARAP1Q96P48 1450 aa8.65□□□□□ -1.02
CDH9-203ENST00000505045 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
CDH9-203ENST00000505045 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
CDH9-203ENST00000505045 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
CDH9-203ENST00000505045 STK24Q9Y6E0 443 aa8.63□□□□□ -1.03
CDH9-203ENST00000505045 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
CDH9-203ENST00000505045 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
CDH9-203ENST00000505045 CEP170Q5SW79 1584 aa8.61□□□□□ -1.03
CDH9-203ENST00000505045 STK25O00506 426 aa8.61□□□□□ -1.03
CDH9-203ENST00000505045 GRIN2AQ12879 1464 aa8.61□□□□□ -1.03
CDH9-203ENST00000505045 ERCC6L2Q5T890 1561 aa8.6□□□□□ -1.03
CDH9-203ENST00000505045 CHMP7Q8WUX9 453 aaPredicted RBP8.59□□□□□ -1.03
CDH9-203ENST00000505045 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
CDH9-203ENST00000505045 ERICH3Q5RHP9 1530 aa8.59□□□□□ -1.03
CDH9-203ENST00000505045 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms