RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 WDR62O43379 1518 aa8.64□□□□□ -1.03
ITGA6-208ENST00000469534 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
ITGA6-208ENST00000469534 FAM163AQ96GL9 167 aaPredicted RBP8.62□□□□□ -1.03
ITGA6-208ENST00000469534 CUX2O14529 1486 aa8.62□□□□□ -1.03
ITGA6-208ENST00000469534 WDR97A6NE52 1622 aa8.62□□□□□ -1.03
ITGA6-208ENST00000469534 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
ITGA6-208ENST00000469534 TMEM106CQ9BVX2 250 aa8.61□□□□□ -1.03
ITGA6-208ENST00000469534 TARBP1Q13395 1621 aaKnown RBP8.59□□□□□ -1.03
ITGA6-208ENST00000469534 SPOCK2Q92563 424 aa8.59□□□□□ -1.03
ITGA6-208ENST00000469534 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
ITGA6-208ENST00000469534 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
ITGA6-208ENST00000469534 ZNF608Q9ULD9 1512 aaPredicted RBP8.57□□□□□ -1.04
ITGA6-208ENST00000469534 PBRM1Q86U86 1689 aa8.56□□□□□ -1.04
ITGA6-208ENST00000469534 ABCA10Q8WWZ4 1543 aa8.56□□□□□ -1.04
ITGA6-208ENST00000469534 PLCG2P16885 1265 aa8.56□□□□□ -1.04
ITGA6-208ENST00000469534 KIF27Q86VH2 1401 aa8.55□□□□□ -1.04
ITGA6-208ENST00000469534 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
ITGA6-208ENST00000469534 ABCA5Q8WWZ7 1642 aa8.54□□□□□ -1.04
ITGA6-208ENST00000469534 EIF4G3O43432 1585 aaKnown RBP8.54□□□□□ -1.04
ITGA6-208ENST00000469534 IFT140Q96RY7 1462 aa8.54□□□□□ -1.04
ITGA6-208ENST00000469534 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
ITGA6-208ENST00000469534 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
ITGA6-208ENST00000469534 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
ITGA6-208ENST00000469534 GAPVD1Q14C86 1478 aa8.52□□□□□ -1.05
ITGA6-208ENST00000469534 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
ITGA6-208ENST00000469534 EEA1Q15075 1411 aa8.51□□□□□ -1.05
ITGA6-208ENST00000469534 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
ITGA6-208ENST00000469534 RAPGEF2Q9Y4G8 1499 aa8.5□□□□□ -1.05
ITGA6-208ENST00000469534 UBTFP17480 764 aaKnown RBP8.49□□□□□ -1.05
ITGA6-208ENST00000469534 IGF1RP08069 1367 aa8.48□□□□□ -1.05
ITGA6-208ENST00000469534 KIF21BO75037 1637 aa8.48□□□□□ -1.05
ITGA6-208ENST00000469534 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
ITGA6-208ENST00000469534 SNAPC4Q5SXM2 1469 aa8.47□□□□□ -1.05
ITGA6-208ENST00000469534 PSEN1P49768 467 aa8.47□□□□□ -1.05
ITGA6-208ENST00000469534 CARMIL1Q5VZK9 1371 aa8.47□□□□□ -1.05
ITGA6-208ENST00000469534 GOLGA3Q08378 1498 aa8.46□□□□□ -1.05
ITGA6-208ENST00000469534 ADAMTS12P58397 1594 aa8.46□□□□□ -1.06
ITGA6-208ENST00000469534 CUL7Q14999 1698 aa8.46□□□□□ -1.06
ITGA6-208ENST00000469534 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
ITGA6-208ENST00000469534 ST18O60284 1047 aa8.45□□□□□ -1.06
ITGA6-208ENST00000469534 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
ITGA6-208ENST00000469534 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
ITGA6-208ENST00000469534 CHD1O14646 1710 aa8.44□□□□□ -1.06
ITGA6-208ENST00000469534 PDAP1Q13442 181 aaKnown RBP8.44□□□□□ -1.06
ITGA6-208ENST00000469534 CDAN1Q8IWY9 1227 aa8.44□□□□□ -1.06
ITGA6-208ENST00000469534 PDCD7Q8N8D1 485 aaKnown RBP8.42□□□□□ -1.06
ITGA6-208ENST00000469534 CTTNBP2Q8WZ74 1663 aa8.42□□□□□ -1.06
ITGA6-208ENST00000469534 ILDR1Q86SU0 546 aaPredicted RBP8.41□□□□□ -1.06
ITGA6-208ENST00000469534 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.41□□□□□ -1.06
ITGA6-208ENST00000469534 FHAD1B1AJZ9 1412 aa8.4□□□□□ -1.06
ITGA6-208ENST00000469534 MKRN3Q13064 507 aaKnown RBP8.4□□□□□ -1.06
ITGA6-208ENST00000469534 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
ITGA6-208ENST00000469534 TNIKQ9UKE5 1360 aa8.38□□□□□ -1.07
ITGA6-208ENST00000469534 SNPHO15079 494 aa8.38□□□□□ -1.07
ITGA6-208ENST00000469534 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
ITGA6-208ENST00000469534 TMEM121BQ9BXQ6 578 aaPredicted RBP8.38□□□□□ -1.07
ITGA6-208ENST00000469534 MAGI1Q96QZ7 1491 aaPredicted RBP8.38□□□□□ -1.07
ITGA6-208ENST00000469534 CEP162Q5TB80 1403 aa8.37□□□□□ -1.07
ITGA6-208ENST00000469534 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
ITGA6-208ENST00000469534 GRIN2AQ12879 1464 aa8.37□□□□□ -1.07
ITGA6-208ENST00000469534 CEP170Q5SW79 1584 aa8.36□□□□□ -1.07
ITGA6-208ENST00000469534 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
ITGA6-208ENST00000469534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.071e-8■□□□□ 8.5
ITGA6-208ENST00000469534 SYNJ2O15056 1496 aa8.36□□□□□ -1.07
ITGA6-208ENST00000469534 TTBK1Q5TCY1 1321 aaPredicted RBP8.35□□□□□ -1.07
ITGA6-208ENST00000469534 RNF25Q96BH1 459 aaPredicted RBP8.35□□□□□ -1.07
ITGA6-208ENST00000469534 CABP2Q9NPB3 220 aa8.35□□□□□ -1.07
ITGA6-208ENST00000469534 L3MBTL3Q96JM7 780 aaPredicted RBP8.34□□□□□ -1.07
ITGA6-208ENST00000469534 CLIP1P30622 1438 aa8.34□□□□□ -1.07
ITGA6-208ENST00000469534 IQGAP2Q13576 1575 aa8.31□□□□□ -1.08
ITGA6-208ENST00000469534 RIOK3O14730 519 aaKnown RBP8.31□□□□□ -1.08
ITGA6-208ENST00000469534 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
ITGA6-208ENST00000469534 PPARGC1BQ86YN6 1023 aaKnown RBP8.31□□□□□ -1.08
ITGA6-208ENST00000469534 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
ITGA6-208ENST00000469534 ARAP1Q96P48 1450 aa8.3□□□□□ -1.08
ITGA6-208ENST00000469534 ARHGAP35Q9NRY4 1499 aa8.3□□□□□ -1.08
ITGA6-208ENST00000469534 FHOD3Q2V2M9 1422 aa8.29□□□□□ -1.08
ITGA6-208ENST00000469534 EFCAB3Q8N7B9 438 aa8.28□□□□□ -1.08
ITGA6-208ENST00000469534 NUP160Q12769 1436 aa8.28□□□□□ -1.08
ITGA6-208ENST00000469534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.27□□□□□ -1.09
ITGA6-208ENST00000469534 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
ITGA6-208ENST00000469534 ZFP91Q96JP5 570 aaPredicted RBP8.27□□□□□ -1.09
ITGA6-208ENST00000469534 ATP1B4Q9UN42 357 aaPredicted RBP8.27□□□□□ -1.09
ITGA6-208ENST00000469534 KIAA0586Q9BVV6 1533 aa8.27□□□□□ -1.09
ITGA6-208ENST00000469534 SAMD9Q5K651 1589 aa8.26□□□□□ -1.09
ITGA6-208ENST00000469534 ERCC6L2Q5T890 1561 aa8.26□□□□□ -1.09
ITGA6-208ENST00000469534 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
ITGA6-208ENST00000469534 EMP3P54852 163 aa8.25□□□□□ -1.09
ITGA6-208ENST00000469534 KIAA0556O60303 1618 aa8.25□□□□□ -1.09
ITGA6-208ENST00000469534 SPNS2Q8IVW8 549 aa8.24□□□□□ -1.09
ITGA6-208ENST00000469534 BOLA1Q9Y3E2 137 aa8.24□□□□□ -1.09
ITGA6-208ENST00000469534 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
ITGA6-208ENST00000469534 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
ITGA6-208ENST00000469534 DISP1Q96F81 1524 aa8.24□□□□□ -1.09
ITGA6-208ENST00000469534 UGGT2Q9NYU1 1516 aa8.24□□□□□ -1.09
ITGA6-208ENST00000469534 PCF11O94913 1555 aaKnown RBP8.23□□□□□ -1.09
ITGA6-208ENST00000469534 SOX12O15370 315 aa8.23□□□□□ -1.09
ITGA6-208ENST00000469534 MMRN1Q13201 1228 aa8.23□□□□□ -1.09
ITGA6-208ENST00000469534 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
ITGA6-208ENST00000469534 VPS8Q8N3P4 1428 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms