RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
ITGA6-208ENST00000469534 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
ITGA6-208ENST00000469534 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
ITGA6-208ENST00000469534 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
ITGA6-208ENST00000469534 FOXD1Q16676 465 aa14.6□□□□□ -0.07
ITGA6-208ENST00000469534 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
ITGA6-208ENST00000469534 MSH5O43196 834 aa13.75□□□□□ -0.21
ITGA6-208ENST00000469534 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
ITGA6-208ENST00000469534 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
ITGA6-208ENST00000469534 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
ITGA6-208ENST00000469534 ADRA2BP18089 450 aa13.5□□□□□ -0.25
ITGA6-208ENST00000469534 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
ITGA6-208ENST00000469534 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
ITGA6-208ENST00000469534 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
ITGA6-208ENST00000469534 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
ITGA6-208ENST00000469534 NISCHQ9Y2I1 1504 aa12.07□□□□□ -0.48
ITGA6-208ENST00000469534 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
ITGA6-208ENST00000469534 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
ITGA6-208ENST00000469534 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
ITGA6-208ENST00000469534 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-208ENST00000469534 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
ITGA6-208ENST00000469534 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
ITGA6-208ENST00000469534 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
ITGA6-208ENST00000469534 C1QBPQ07021 282 aaKnown RBP11.54□□□□□ -0.56
ITGA6-208ENST00000469534 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
ITGA6-208ENST00000469534 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
ITGA6-208ENST00000469534 KCNA4P22459 653 aa11.39□□□□□ -0.59
ITGA6-208ENST00000469534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
ITGA6-208ENST00000469534 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
ITGA6-208ENST00000469534 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
ITGA6-208ENST00000469534 CAPN15O75808 1086 aa10.95□□□□□ -0.66
ITGA6-208ENST00000469534 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-208ENST00000469534 DSG3P32926 999 aa10.92□□□□□ -0.66
ITGA6-208ENST00000469534 APLP2Q06481 763 aa10.8□□□□□ -0.68
ITGA6-208ENST00000469534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
ITGA6-208ENST00000469534 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
ITGA6-208ENST00000469534 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
ITGA6-208ENST00000469534 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
ITGA6-208ENST00000469534 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
ITGA6-208ENST00000469534 ABCB7O75027 752 aa10.68□□□□□ -0.7
ITGA6-208ENST00000469534 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
ITGA6-208ENST00000469534 POTEHQ6S545 545 aa10.66□□□□□ -0.7
ITGA6-208ENST00000469534 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
ITGA6-208ENST00000469534 CCDC180Q9P1Z9 1646 aa10.59□□□□□ -0.71
ITGA6-208ENST00000469534 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
ITGA6-208ENST00000469534 ZBTB22O15209 634 aa10.49□□□□□ -0.73
ITGA6-208ENST00000469534 RBM42Q9BTD8 480 aaKnown RBP10.45□□□□□ -0.74
ITGA6-208ENST00000469534 POLA2Q14181 598 aa10.42□□□□□ -0.74
ITGA6-208ENST00000469534 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
ITGA6-208ENST00000469534 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
ITGA6-208ENST00000469534 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
ITGA6-208ENST00000469534 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
ITGA6-208ENST00000469534 ABCC9O60706 1549 aa10.23□□□□□ -0.77
ITGA6-208ENST00000469534 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
ITGA6-208ENST00000469534 DCAF8L2P0C7V8 631 aa10.15□□□□□ -0.78
ITGA6-208ENST00000469534 OSCARQ8IYS5 282 aa10.11□□□□□ -0.79
ITGA6-208ENST00000469534 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
ITGA6-208ENST00000469534 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
ITGA6-208ENST00000469534 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
ITGA6-208ENST00000469534 PIP4P2Q8N4L2 257 aa9.98□□□□□ -0.81
ITGA6-208ENST00000469534 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
ITGA6-208ENST00000469534 FBLN2P98095 1184 aa9.95□□□□□ -0.82
ITGA6-208ENST00000469534 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
ITGA6-208ENST00000469534 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
ITGA6-208ENST00000469534 EHMT2Q96KQ7 1210 aa9.93□□□□□ -0.82
ITGA6-208ENST00000469534 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
ITGA6-208ENST00000469534 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
ITGA6-208ENST00000469534 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
ITGA6-208ENST00000469534 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
ITGA6-208ENST00000469534 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
ITGA6-208ENST00000469534 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
ITGA6-208ENST00000469534 NACADO15069 1562 aa9.86□□□□□ -0.83
ITGA6-208ENST00000469534 RB1CC1Q8TDY2 1594 aa9.85□□□□□ -0.83
ITGA6-208ENST00000469534 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
ITGA6-208ENST00000469534 HAX1O00165 279 aa9.82□□□□□ -0.84
ITGA6-208ENST00000469534 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
ITGA6-208ENST00000469534 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
ITGA6-208ENST00000469534 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
ITGA6-208ENST00000469534 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
ITGA6-208ENST00000469534 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
ITGA6-208ENST00000469534 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
ITGA6-208ENST00000469534 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
ITGA6-208ENST00000469534 EVX2Q03828 476 aa9.66□□□□□ -0.86
ITGA6-208ENST00000469534 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
ITGA6-208ENST00000469534 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
ITGA6-208ENST00000469534 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
ITGA6-208ENST00000469534 PRR29P0C7W0 189 aa9.55□□□□□ -0.88
ITGA6-208ENST00000469534 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
ITGA6-208ENST00000469534 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
ITGA6-208ENST00000469534 GABBR2O75899 941 aa9.46□□□□□ -0.9
ITGA6-208ENST00000469534 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
ITGA6-208ENST00000469534 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
ITGA6-208ENST00000469534 FARP1Q9Y4F1 1045 aaPredicted RBP9.41□□□□□ -0.9
ITGA6-208ENST00000469534 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
ITGA6-208ENST00000469534 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
ITGA6-208ENST00000469534 MROH2BQ7Z745 1585 aa9.37□□□□□ -0.91
ITGA6-208ENST00000469534 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
ITGA6-208ENST00000469534 PROM2Q8N271 834 aa9.34□□□□□ -0.91
ITGA6-208ENST00000469534 WIZO95785 1651 aa9.34□□□□□ -0.91
ITGA6-208ENST00000469534 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms