RNA–Protein interactions for RNA: ENST00000468717.5

PCP4-204, Transcript of Purkinje cell protein 4, humanhuman

TSL 2

Gene PCP4, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-204ENST00000468717 ZNF467Q7Z7K2 595 aaPredicted RBP11.89□□□□□ -0.51
PCP4-204ENST00000468717 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
PCP4-204ENST00000468717 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
PCP4-204ENST00000468717 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
PCP4-204ENST00000468717 PSEN1P49768 467 aa11.83□□□□□ -0.52
PCP4-204ENST00000468717 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
PCP4-204ENST00000468717 WDR97A6NE52 1622 aa11.81□□□□□ -0.52
PCP4-204ENST00000468717 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
PCP4-204ENST00000468717 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
PCP4-204ENST00000468717 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
PCP4-204ENST00000468717 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
PCP4-204ENST00000468717 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
PCP4-204ENST00000468717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCP4-204ENST00000468717 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
PCP4-204ENST00000468717 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
PCP4-204ENST00000468717 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
PCP4-204ENST00000468717 CUX1P39880 1505 aa11.76□□□□□ -0.53
PCP4-204ENST00000468717 SNPHO15079 494 aa11.76□□□□□ -0.53
PCP4-204ENST00000468717 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
PCP4-204ENST00000468717 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
PCP4-204ENST00000468717 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
PCP4-204ENST00000468717 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
PCP4-204ENST00000468717 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
PCP4-204ENST00000468717 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
PCP4-204ENST00000468717 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
PCP4-204ENST00000468717 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
PCP4-204ENST00000468717 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
PCP4-204ENST00000468717 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
PCP4-204ENST00000468717 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
PCP4-204ENST00000468717 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
PCP4-204ENST00000468717 SOGA1O94964 1423 aa11.69□□□□□ -0.54
PCP4-204ENST00000468717 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
PCP4-204ENST00000468717 ZNF608Q9ULD9 1512 aaPredicted RBP11.68□□□□□ -0.54
PCP4-204ENST00000468717 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
PCP4-204ENST00000468717 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
PCP4-204ENST00000468717 RAD54L2Q9Y4B4 1467 aa11.65□□□□□ -0.54
PCP4-204ENST00000468717 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
PCP4-204ENST00000468717 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
PCP4-204ENST00000468717 CHD1O14646 1710 aa11.65□□□□□ -0.54
PCP4-204ENST00000468717 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
PCP4-204ENST00000468717 MMRN1Q13201 1228 aa11.64□□□□□ -0.55
PCP4-204ENST00000468717 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
PCP4-204ENST00000468717 EMP3P54852 163 aa11.63□□□□□ -0.55
PCP4-204ENST00000468717 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
PCP4-204ENST00000468717 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
PCP4-204ENST00000468717 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
PCP4-204ENST00000468717 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCP4-204ENST00000468717 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
PCP4-204ENST00000468717 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
PCP4-204ENST00000468717 PKD2Q13563 968 aa11.6□□□□□ -0.55
PCP4-204ENST00000468717 HOXB3P14651 431 aaPredicted RBP11.59□□□□□ -0.55
PCP4-204ENST00000468717 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
PCP4-204ENST00000468717 HS3ST6Q96QI5 342 aa11.58□□□□□ -0.56
PCP4-204ENST00000468717 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
PCP4-204ENST00000468717 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
PCP4-204ENST00000468717 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
PCP4-204ENST00000468717 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
PCP4-204ENST00000468717 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
PCP4-204ENST00000468717 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
PCP4-204ENST00000468717 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
PCP4-204ENST00000468717 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
PCP4-204ENST00000468717 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
PCP4-204ENST00000468717 ADAMTS12P58397 1594 aa11.52□□□□□ -0.57
PCP4-204ENST00000468717 G3V3G9 751 aa11.51□□□□□ -0.57
PCP4-204ENST00000468717 CUL7Q14999 1698 aa11.51□□□□□ -0.57
PCP4-204ENST00000468717 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
PCP4-204ENST00000468717 CLASP1Q7Z460 1538 aa11.46□□□□□ -0.57
PCP4-204ENST00000468717 KIF27Q86VH2 1401 aa11.46□□□□□ -0.57
PCP4-204ENST00000468717 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.57
PCP4-204ENST00000468717 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
PCP4-204ENST00000468717 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
PCP4-204ENST00000468717 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
PCP4-204ENST00000468717 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
PCP4-204ENST00000468717 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
PCP4-204ENST00000468717 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
PCP4-204ENST00000468717 RIMBP3CA6NJZ7 1639 aa11.44□□□□□ -0.58
PCP4-204ENST00000468717 RIMBP3BA6NNM3 1639 aa11.44□□□□□ -0.58
PCP4-204ENST00000468717 RIMBP3Q9UFD9 1639 aa11.44□□□□□ -0.58
PCP4-204ENST00000468717 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
PCP4-204ENST00000468717 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
PCP4-204ENST00000468717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
PCP4-204ENST00000468717 RGL2O15211 777 aa11.41□□□□□ -0.58
PCP4-204ENST00000468717 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
PCP4-204ENST00000468717 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
PCP4-204ENST00000468717 ARHGEF11O15085 1522 aa11.4□□□□□ -0.58
PCP4-204ENST00000468717 CEP170Q5SW79 1584 aa11.4□□□□□ -0.58
PCP4-204ENST00000468717 NUP160Q12769 1436 aa11.39□□□□□ -0.59
PCP4-204ENST00000468717 SHROOM2Q13796 1616 aa11.38□□□□□ -0.59
PCP4-204ENST00000468717 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
PCP4-204ENST00000468717 SOX12O15370 315 aa11.37□□□□□ -0.59
PCP4-204ENST00000468717 RUSC2Q8N2Y8 1516 aa11.36□□□□□ -0.59
PCP4-204ENST00000468717 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
PCP4-204ENST00000468717 ERBB3P21860 1342 aa11.35□□□□□ -0.59
PCP4-204ENST00000468717 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
PCP4-204ENST00000468717 IGF1RP08069 1367 aa11.35□□□□□ -0.59
PCP4-204ENST00000468717 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
PCP4-204ENST00000468717 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
PCP4-204ENST00000468717 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
PCP4-204ENST00000468717 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
PCP4-204ENST00000468717 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms