RNA–Protein interactions for RNA: ENST00000468717.5

PCP4-204, Transcript of Purkinje cell protein 4, humanhuman

TSL 2

Gene PCP4, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-204ENST00000468717 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
PCP4-204ENST00000468717 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
PCP4-204ENST00000468717 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
PCP4-204ENST00000468717 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
PCP4-204ENST00000468717 FOXD1Q16676 465 aa20.75■□□□□ 0.91
PCP4-204ENST00000468717 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
PCP4-204ENST00000468717 MSH5O43196 834 aa19.41■□□□□ 0.7
PCP4-204ENST00000468717 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
PCP4-204ENST00000468717 PIAS4Q8N2W9 510 aaPredicted RBP19.31■□□□□ 0.68
PCP4-204ENST00000468717 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
PCP4-204ENST00000468717 ADRA2BP18089 450 aa19.2■□□□□ 0.66
PCP4-204ENST00000468717 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
PCP4-204ENST00000468717 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
PCP4-204ENST00000468717 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
PCP4-204ENST00000468717 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
PCP4-204ENST00000468717 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
PCP4-204ENST00000468717 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
PCP4-204ENST00000468717 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
PCP4-204ENST00000468717 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
PCP4-204ENST00000468717 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
PCP4-204ENST00000468717 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
PCP4-204ENST00000468717 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
PCP4-204ENST00000468717 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
PCP4-204ENST00000468717 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
PCP4-204ENST00000468717 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
PCP4-204ENST00000468717 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
PCP4-204ENST00000468717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCP4-204ENST00000468717 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
PCP4-204ENST00000468717 KCNA4P22459 653 aa15.73■□□□□ 0.11
PCP4-204ENST00000468717 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
PCP4-204ENST00000468717 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
PCP4-204ENST00000468717 CAPN15O75808 1086 aa15.48■□□□□ 0.07
PCP4-204ENST00000468717 DSG3P32926 999 aa15.48■□□□□ 0.07
PCP4-204ENST00000468717 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
PCP4-204ENST00000468717 ABCB7O75027 752 aa15.16■□□□□ 0.02
PCP4-204ENST00000468717 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
PCP4-204ENST00000468717 APLP2Q06481 763 aa15.13■□□□□ 0.01
PCP4-204ENST00000468717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
PCP4-204ENST00000468717 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
PCP4-204ENST00000468717 POTEHQ6S545 545 aa15.06■□□□□ 0
PCP4-204ENST00000468717 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
PCP4-204ENST00000468717 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
PCP4-204ENST00000468717 POLA2Q14181 598 aa14.77□□□□□ -0.05
PCP4-204ENST00000468717 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
PCP4-204ENST00000468717 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
PCP4-204ENST00000468717 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
PCP4-204ENST00000468717 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
PCP4-204ENST00000468717 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
PCP4-204ENST00000468717 ZBTB22O15209 634 aa14.52□□□□□ -0.09
PCP4-204ENST00000468717 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
PCP4-204ENST00000468717 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
PCP4-204ENST00000468717 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
PCP4-204ENST00000468717 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
PCP4-204ENST00000468717 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
PCP4-204ENST00000468717 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
PCP4-204ENST00000468717 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
PCP4-204ENST00000468717 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
PCP4-204ENST00000468717 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
PCP4-204ENST00000468717 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
PCP4-204ENST00000468717 ABCC9O60706 1549 aa14.11□□□□□ -0.15
PCP4-204ENST00000468717 SP7Q8TDD2 431 aaPredicted RBP14.04□□□□□ -0.16
PCP4-204ENST00000468717 FXR2P51116 673 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCP4-204ENST00000468717 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
PCP4-204ENST00000468717 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
PCP4-204ENST00000468717 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
PCP4-204ENST00000468717 FBLN2P98095 1184 aa13.98□□□□□ -0.17
PCP4-204ENST00000468717 SPDYE2Q495Y8 402 aa13.98□□□□□ -0.17
PCP4-204ENST00000468717 HAX1O00165 279 aa13.88□□□□□ -0.19
PCP4-204ENST00000468717 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
PCP4-204ENST00000468717 EVX2Q03828 476 aa13.8□□□□□ -0.2
PCP4-204ENST00000468717 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
PCP4-204ENST00000468717 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
PCP4-204ENST00000468717 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
PCP4-204ENST00000468717 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PCP4-204ENST00000468717 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
PCP4-204ENST00000468717 NACADO15069 1562 aa13.71□□□□□ -0.21
PCP4-204ENST00000468717 MYO15BQ96JP2 1530 aa13.66□□□□□ -0.22
PCP4-204ENST00000468717 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
PCP4-204ENST00000468717 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCP4-204ENST00000468717 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
PCP4-204ENST00000468717 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
PCP4-204ENST00000468717 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
PCP4-204ENST00000468717 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
PCP4-204ENST00000468717 PRR29P0C7W0 189 aa13.48□□□□□ -0.25
PCP4-204ENST00000468717 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
PCP4-204ENST00000468717 GABBR2O75899 941 aa13.41□□□□□ -0.26
PCP4-204ENST00000468717 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
PCP4-204ENST00000468717 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
PCP4-204ENST00000468717 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
PCP4-204ENST00000468717 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
PCP4-204ENST00000468717 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
PCP4-204ENST00000468717 POTEIP0CG38 1075 aa13.19□□□□□ -0.3
PCP4-204ENST00000468717 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
PCP4-204ENST00000468717 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
PCP4-204ENST00000468717 LHX8Q68G74 356 aa13.15□□□□□ -0.3
PCP4-204ENST00000468717 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
PCP4-204ENST00000468717 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
PCP4-204ENST00000468717 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
PCP4-204ENST00000468717 CLCN6P51797 869 aa13.04□□□□□ -0.32
PCP4-204ENST00000468717 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 608 ms