RNA–Protein interactions for RNA: ENST00000423296.6

WDR48-204, Transcript of WD repeat domain 48, humanhuman

TSL 4

Gene WDR48, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-204ENST00000423296 SNPHO15079 494 aa10.72□□□□□ -0.69
WDR48-204ENST00000423296 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
WDR48-204ENST00000423296 IFT140Q96RY7 1462 aa10.71□□□□□ -0.69
WDR48-204ENST00000423296 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
WDR48-204ENST00000423296 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
WDR48-204ENST00000423296 TMEM121BQ9BXQ6 578 aaPredicted RBP10.69□□□□□ -0.7
WDR48-204ENST00000423296 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
WDR48-204ENST00000423296 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
WDR48-204ENST00000423296 DNMBPQ6XZF7 1577 aa10.66□□□□□ -0.7
WDR48-204ENST00000423296 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
WDR48-204ENST00000423296 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
WDR48-204ENST00000423296 L3MBTL3Q96JM7 780 aaPredicted RBP10.66□□□□□ -0.7
WDR48-204ENST00000423296 PSEN1P49768 467 aa10.64□□□□□ -0.71
WDR48-204ENST00000423296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.718e-8■■■□□ 18.1
WDR48-204ENST00000423296 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.71
WDR48-204ENST00000423296 SOGA1O94964 1423 aa10.59□□□□□ -0.71
WDR48-204ENST00000423296 PDAP1Q13442 181 aaKnown RBP10.59□□□□□ -0.71
WDR48-204ENST00000423296 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
WDR48-204ENST00000423296 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
WDR48-204ENST00000423296 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
WDR48-204ENST00000423296 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
WDR48-204ENST00000423296 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
WDR48-204ENST00000423296 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
WDR48-204ENST00000423296 TDRD9Q8NDG6 1382 aaKnown RBP10.56□□□□□ -0.72
WDR48-204ENST00000423296 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
WDR48-204ENST00000423296 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
WDR48-204ENST00000423296 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
WDR48-204ENST00000423296 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
WDR48-204ENST00000423296 FGD5Q6ZNL6 1462 aa10.54□□□□□ -0.72
WDR48-204ENST00000423296 EMP3P54852 163 aa10.53□□□□□ -0.72
WDR48-204ENST00000423296 CYB5RLQ6IPT4 315 aa10.53□□□□□ -0.72
WDR48-204ENST00000423296 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
WDR48-204ENST00000423296 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
WDR48-204ENST00000423296 G3V3G9 751 aa10.52□□□□□ -0.73
WDR48-204ENST00000423296 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
WDR48-204ENST00000423296 CABP2Q9NPB3 220 aa10.52□□□□□ -0.73
WDR48-204ENST00000423296 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
WDR48-204ENST00000423296 CHD1O14646 1710 aa10.51□□□□□ -0.73
WDR48-204ENST00000423296 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
WDR48-204ENST00000423296 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
WDR48-204ENST00000423296 CUX1P39880 1505 aa10.51□□□□□ -0.73
WDR48-204ENST00000423296 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
WDR48-204ENST00000423296 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
WDR48-204ENST00000423296 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
WDR48-204ENST00000423296 WDR97A6NE52 1622 aa10.48□□□□□ -0.73
WDR48-204ENST00000423296 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
WDR48-204ENST00000423296 EEA1Q15075 1411 aa10.48□□□□□ -0.73
WDR48-204ENST00000423296 GRIN2BQ13224 1484 aa10.48□□□□□ -0.73
WDR48-204ENST00000423296 SNAPC4Q5SXM2 1469 aa10.48□□□□□ -0.73
WDR48-204ENST00000423296 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
WDR48-204ENST00000423296 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
WDR48-204ENST00000423296 GAPVD1Q14C86 1478 aa10.44□□□□□ -0.74
WDR48-204ENST00000423296 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
WDR48-204ENST00000423296 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
WDR48-204ENST00000423296 SYNJ2O15056 1496 aa10.42□□□□□ -0.74
WDR48-204ENST00000423296 SYNJ1O43426 1573 aa10.42□□□□□ -0.74
WDR48-204ENST00000423296 ABCA10Q8WWZ4 1543 aa10.42□□□□□ -0.74
WDR48-204ENST00000423296 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
WDR48-204ENST00000423296 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
WDR48-204ENST00000423296 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.75
WDR48-204ENST00000423296 PBRM1Q86U86 1689 aa10.39□□□□□ -0.75
WDR48-204ENST00000423296 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
WDR48-204ENST00000423296 POTEB3A0JP26 581 aa10.38□□□□□ -0.75
WDR48-204ENST00000423296 POTEBQ6S5H4 581 aa10.38□□□□□ -0.75
WDR48-204ENST00000423296 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
WDR48-204ENST00000423296 HOXB3P14651 431 aaPredicted RBP10.37□□□□□ -0.75
WDR48-204ENST00000423296 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
WDR48-204ENST00000423296 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
WDR48-204ENST00000423296 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
WDR48-204ENST00000423296 ABCA5Q8WWZ7 1642 aa10.36□□□□□ -0.75
WDR48-204ENST00000423296 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
WDR48-204ENST00000423296 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
WDR48-204ENST00000423296 GOLGA3Q08378 1498 aa10.33□□□□□ -0.76
WDR48-204ENST00000423296 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
WDR48-204ENST00000423296 KIF21BO75037 1637 aa10.32□□□□□ -0.76
WDR48-204ENST00000423296 FHAD1B1AJZ9 1412 aa10.32□□□□□ -0.76
WDR48-204ENST00000423296 RIMBP2O15034 1052 aa10.31□□□□□ -0.76
WDR48-204ENST00000423296 ERBB3P21860 1342 aa10.3□□□□□ -0.76
WDR48-204ENST00000423296 ERICH3Q5RHP9 1530 aa10.29□□□□□ -0.76
WDR48-204ENST00000423296 TNIKQ9UKE5 1360 aa10.28□□□□□ -0.76
WDR48-204ENST00000423296 ADAMTS12P58397 1594 aa10.28□□□□□ -0.76
WDR48-204ENST00000423296 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
WDR48-204ENST00000423296 NUP160Q12769 1436 aa10.27□□□□□ -0.77
WDR48-204ENST00000423296 RIOK3O14730 519 aaKnown RBP10.27□□□□□ -0.77
WDR48-204ENST00000423296 SOX12O15370 315 aa10.27□□□□□ -0.77
WDR48-204ENST00000423296 TRIM26Q12899 539 aaPredicted RBP10.27□□□□□ -0.77
WDR48-204ENST00000423296 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
WDR48-204ENST00000423296 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
WDR48-204ENST00000423296 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
WDR48-204ENST00000423296 UBTFP17480 764 aaKnown RBP10.26□□□□□ -0.77
WDR48-204ENST00000423296 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
WDR48-204ENST00000423296 CEP162Q5TB80 1403 aa10.24□□□□□ -0.77
WDR48-204ENST00000423296 ERCC6L2Q5T890 1561 aa10.23□□□□□ -0.77
WDR48-204ENST00000423296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.23□□□□□ -0.77
WDR48-204ENST00000423296 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
WDR48-204ENST00000423296 ZFP91Q96JP5 570 aaPredicted RBP10.23□□□□□ -0.77
WDR48-204ENST00000423296 ZSWIM6Q9HCJ5 1215 aa10.23□□□□□ -0.77
WDR48-204ENST00000423296 KIF27Q86VH2 1401 aa10.23□□□□□ -0.77
WDR48-204ENST00000423296 PRG4Q92954 1404 aaPredicted RBP10.22□□□□□ -0.77
WDR48-204ENST00000423296 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms